iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Csa-024098

Ensembl Protein ID

ENSCSAP00000016323.1

UniProt Accession

A0A0D9S634; A0A0D9S634_CHLSB

Genbank Protein ID

ENSCSAP00000016323

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AQIB01086245

Gene Name

WDR3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCSAG00000001705.1	ENSCSAT00000016824.1	ENSCSAP00000016323.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-44	148.2	673	703
UBD/Beta-Prp	7.20e-95	317.5	35	223

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH  +++cla  ++ +++vs+s+D+++++W+
   Q: 673  GHHQEIWCLAVsPSgDYVVSSSHDKSLRLWE 703
           78899*******666***************8 PP

UBD/Beta-Prp

   S: 64   gkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnll 152
           +  +v +   +++ +wdl++g+ + +l+g +++v++l  sp+g +l++G +d  ir++ l +g+    t++gh+++++++++++ g  l
   Q: 35   KGRYVAVPACEHVFIWDLRKGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNV-TFNGHKAAITTLKYDQLGGRL 122
           4455555555667788888888888888888888888888888888888888888888888888888.888888888888888888888 PP
   S: 153  vsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgs 241
           +sGs+D+ v +Wd+ +++ l++l+g h+d+++   f ++++ lv+ ++d+ vk wdl t++c +t+ gh++ v+ + + ++++rl++g+
   Q: 123  ASGSKDTDVIVWDVINESGLYRLKG-HKDAITQALFLREKNLLVTSGKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLVSEEKRLITGA 210
           8888888888888888888888887.888888888888888888888888888888888888888888888888888888888888888 PP
   S: 242  sDgsiriWdlrsg 254
           sD  +r+Wd+   
   Q: 211  SDSELRVWDIAYL 223
           8888888876544 PP

Organism

Chlorocebus sabaeus

Protein Sequence
(Fasta)

MGLTKQYLRY VASAVFGIIG SQKGNIVFVT LRGEKGRYVA VPACEHVFIW DLRKGEKILI 60
LQGLKQEVTC LCPSPDGLHL AVGYEDGSIR IFSLLSGEGN VTFNGHKAAI TTLKYDQLGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGGCGGATC AATTGAGGTC AGGCGTTCCA GACCAGCCTG GTCAACATGG TGAAACCCCA 60
TCTCTACTAA AAAAAAAAAA TACAAAAATT AGCCGGGTAT GGTGGCACAT GCCTGTAGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0031965--C:nuclear membrane
GO:0005730--C:nucleolus
GO:0003723--F:RNA binding

KEGG

csab:103224118

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	39.02	3.00e-153	535.00
IUUC-Aml-001245	Ailuropoda melanoleuca	94.38	0.00e+00	1678.00
IUUC-Atr-002700	Amborella trichopoda	39.62	2.00e-180	625.00
IUUC-Apl-004164	Anas platyrhynchos	78.69	0.00e+00	1066.00
IUUC-Aca-004765	Anolis carolinensis	74.95	0.00e+00	1379.00
IUUC-Aly-006503	Arabidopsis lyrata	39.07	0.00e+00	628.00
IUUC-Ath-006848	Arabidopsis thaliana	39.01	0.00e+00	638.00
IUUC-Ago-007909	Ashbya gossypii	35.47	4.00e-151	528.00
IUUC-Acl-008238	Aspergillus clavatus	39.13	0.00e+00	650.00
IUUC-Afl-008544	Aspergillus flavus	39.18	0.00e+00	635.00
IUUC-Afu-008868	Aspergillus fumigatus	38.76	0.00e+00	638.00
IUUC-Ani-009367	Aspergillus nidulans	38.36	2.00e-179	623.00
IUUC-Ang-009732	Aspergillus niger	39.59	0.00e+00	648.00
IUUC-Aor-010140	Aspergillus oryzae	39.25	0.00e+00	638.00
IUUC-Ate-010572	Aspergillus terreus	38.37	0.00e+00	635.00
IUUC-Ame-010956	Astyanax mexicanus	64.77	0.00e+00	1162.00
IUUC-Bgr-012296	Blumeria graminis	37.35	7.00e-178	617.00
IUUC-Bta-012716	Bos taurus	94.59	0.00e+00	1686.00
IUUC-Bci-013699	Botrytis cinerea	37.21	3.00e-169	589.00
IUUC-Bdi-014525	Brachypodium distachyon	38.59	1.00e-166	580.00
IUUC-Bol-015117	Brassica oleracea	38.73	4.00e-178	618.00
IUUC-Bra-016869	Brassica rapa	38.94	7.00e-180	624.00
IUUC-Cel-018570	Caenorhabditis elegans	33.48	9.00e-132	464.00
IUUC-Cja-019425	Callithrix jacchus	95.66	0.00e+00	1733.00
IUUC-Cfa-020787	Canis familiaris	93.21	0.00e+00	1687.00
IUUC-Cpo-021729	Cavia porcellus	94.12	0.00e+00	1219.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	43.39	2.00e-105	376.00
IUUC-Cho-024495	Choloepus hoffmanni	80.00	0.00e+00	948.00
IUUC-Cin-025245	Ciona intestinalis	49.25	2.00e-170	592.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	38.80	8.00e-174	604.00
IUUC-Cne-026835	Cryptococcus neoformans	46.23	1.00e-132	467.00
IUUC-Cme-027162	Cyanidioschyzon merolae	26.13	1.00e-38	155.00
IUUC-Dre-027874	Danio rerio	71.10	0.00e+00	1318.00
IUUC-Dno-028905	Dasypus novemcinctus	93.53	0.00e+00	1695.00
IUUC-Dor-030383	Dipodomys ordii	89.29	0.00e+00	831.00
IUUC-Dse-031297	Dothistroma septosporum	38.32	4.00e-170	592.00
IUUC-Dme-031956	Drosophila melanogaster	42.49	0.00e+00	698.00
IUUC-Ete-032608	Echinops telfairi	83.90	0.00e+00	939.00
IUUC-Eca-034181	Equus caballus	94.59	0.00e+00	1673.00
IUUC-Eeu-034495	Erinaceus europaeus	92.49	0.00e+00	1602.00
IUUC-Fca-035994	Felis catus	93.53	0.00e+00	1575.00
IUUC-Fal-036611	Ficedula albicollis	77.11	0.00e+00	1358.00
IUUC-Fox-037807	Fusarium oxysporum	37.86	1.00e-175	610.00
IUUC-Fso-038090	Fusarium solani	37.41	6.00e-172	598.00
IUUC-Gmo-039018	Gadus morhua	63.75	0.00e+00	700.00
IUUC-Ggr-039748	Gaeumannomyces graminis	37.36	6.00e-176	611.00
IUUC-Gga-040707	Gallus gallus	78.57	0.00e+00	1384.00
IUUC-Gac-042334	Gasterosteus aculeatus	63.72	0.00e+00	686.00
IUUC-Gma-043860	Glycine max	38.24	1.00e-176	613.00
IUUC-Ggo-045334	Gorilla gorilla	98.31	0.00e+00	1723.00
IUUC-Hsa-046996	Homo sapiens	98.41	0.00e+00	1724.00
IUUC-Hvu-047381	Hordeum vulgare	34.94	2.00e-91	329.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	94.17	0.00e+00	1667.00
IUUC-Kpa-049185	Komagataella pastoris	35.66	2.00e-149	523.00
IUUC-Lch-050098	Latimeria chalumnae	67.85	0.00e+00	1175.00
IUUC-Lpe-050710	Leersia perrieri	36.47	6.00e-160	558.00
IUUC-Loc-052745	Lepisosteus oculatus	68.97	0.00e+00	1231.00
IUUC-Lma-053104	Leptosphaeria maculans	39.00	0.00e+00	634.00
IUUC-Laf-054395	Loxodonta africana	92.90	0.00e+00	1652.00
IUUC-Mcc-055077	Macaca mulatta	99.36	0.00e+00	1783.00
IUUC-Meu-056418	Macropus eugenii	82.73	0.00e+00	735.00
IUUC-Mor-057031	Magnaporthe oryzae	38.08	2.00e-162	566.00
IUUC-Mpo-057420	Magnaporthe poae	37.42	3.00e-174	605.00
IUUC-Mtr-057838	Medicago truncatula	38.66	0.00e+00	643.00
IUUC-Mla-058854	Melampsora laricipopulina	37.06	1.00e-164	573.00
IUUC-Mga-060120	Meleagris gallopavo	74.73	0.00e+00	1285.00
IUUC-Mvi-060407	Microbotryum violaceum	44.28	2.00e-142	499.00
IUUC-Mmr-060635	Microcebus murinus	93.86	0.00e+00	1651.00
IUUC-Mdo-063023	Monodelphis domestica	87.06	0.00e+00	1602.00
IUUC-Mmu-064103	Mus musculus	90.89	0.00e+00	1636.00
IUUC-Mac-065569	Musa acuminata	38.41	2.00e-176	612.00
IUUC-Mpu-066462	Mustela putorius furo	93.96	0.00e+00	1697.00
IUUC-Mlu-067894	Myotis lucifugus	94.06	0.00e+00	1705.00
IUUC-Nfi-068321	Neosartorya fischeri	38.89	0.00e+00	636.00
IUUC-Ncr-068661	Neurospora crassa	38.35	4.00e-175	608.00
IUUC-Nle-069409	Nomascus leucogenys	98.30	0.00e+00	1746.00
IUUC-Opr-070445	Ochotona princeps	83.81	0.00e+00	1523.00
IUUC-Ont-072339	Oreochromis niloticus	70.02	0.00e+00	1272.00
IUUC-Oan-073688	Ornithorhynchus anatinus	77.22	0.00e+00	1363.00
IUUC-Ocu-074227	Oryctolagus cuniculus	95.65	0.00e+00	1736.00
IUUC-Oba-075635	Oryza barthii	36.91	2.00e-155	543.00
IUUC-Obr-076897	Oryza brachyantha	37.97	1.00e-167	583.00
IUUC-Ogl-077555	Oryza glaberrima	36.80	7.00e-155	541.00
IUUC-Ogu-078724	Oryza glumaepatula	36.91	1.00e-156	546.00
IUUC-Oin-080030	Oryza indica	36.91	2.00e-155	543.00
IUUC-Olo-080687	Oryza longistaminata	34.95	6.00e-144	504.00
IUUC-Ome-081867	Oryza meridionalis	37.12	7.00e-157	548.00
IUUC-Oni-082559	Oryza nivara	36.91	2.00e-155	543.00
IUUC-Opu-083332	Oryza punctata	39.76	7.00e-147	514.00
IUUC-Oru-084455	Oryza rufipogon	36.91	1.00e-155	543.00
IUUC-Osa-085793	Oryza sativa	36.91	1.00e-155	543.00
IUUC-Ola-087395	Oryzias latipes	68.57	0.00e+00	1177.00
IUUC-Olu-087768	Ostreococcus lucimarinus	37.69	4.00e-158	551.00
IUUC-Oga-088574	Otolemur garnettii	95.12	0.00e+00	1718.00
IUUC-Oar-089453	Ovis aries	92.80	0.00e+00	1669.00
IUUC-Ptr-090694	Pan troglodytes	98.30	0.00e+00	1721.00
IUUC-Pan-092420	Papio anubis	99.15	0.00e+00	1777.00
IUUC-Psi-093683	Pelodiscus sinensis	82.48	0.00e+00	1465.00
IUUC-Pma-094197	Petromyzon marinus	57.02	4.00e-71	260.00
IUUC-Pno-094783	Phaeosphaeria nodorum	37.97	0.00e+00	634.00
IUUC-Ppa-095208	Physcomitrella patens	39.53	2.00e-177	616.00
IUUC-Pfo-096299	Poecilia formosa	68.75	0.00e+00	1277.00
IUUC-Pab-098706	Pongo abelii	98.52	0.00e+00	1740.00
IUUC-Pop-099275	Populus trichocarpa	38.44	6.00e-177	614.00
IUUC-Pca-100796	Procavia capensis	78.66	0.00e+00	1249.00
IUUC-Ppe-101861	Prunus persica	39.62	0.00e+00	640.00
IUUC-Pva-103241	Pteropus vampyrus	88.71	0.00e+00	1520.00
IUUC-Pgr-103432	Puccinia graminis	41.05	5.00e-125	442.00
IUUC-Ptt-103742	Puccinia triticina	40.03	4.00e-112	399.00
IUUC-Pte-104069	Pyrenophora teres	37.88	1.00e-170	593.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	37.67	2.00e-177	616.00
IUUC-Rno-105219	Rattus norvegicus	90.36	0.00e+00	1593.00
IUUC-Sce-106271	Saccharomyces cerevisiae	34.48	8.00e-137	481.00
IUUC-Sha-107550	Sarcophilus harrisii	87.03	0.00e+00	1594.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	38.23	1.00e-170	593.00
IUUC-Spo-108239	Schizosaccharomyces pombe	37.87	1.00e-174	607.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	37.93	2.00e-175	609.00
IUUC-Smo-108974	Selaginella moellendorffii	39.17	6.00e-172	597.00
IUUC-Sit-110000	Setaria italica	38.55	6.00e-159	555.00
IUUC-Sly-111595	Solanum lycopersicum	38.20	4.00e-180	625.00
IUUC-Stu-112516	Solanum tuberosum	37.96	3.00e-179	622.00
IUUC-Sar-113195	Sorex araneus	83.86	0.00e+00	1333.00
IUUC-Sbi-114465	Sorghum bicolor	36.99	4.00e-168	585.00
IUUC-Sre-115006	Sporisorium reilianum	34.96	5.00e-155	541.00
IUUC-Ssc-115929	Sus scrofa	93.53	0.00e+00	1647.00
IUUC-Tgu-117282	Taeniopygia guttata	77.33	0.00e+00	1358.00
IUUC-Tru-118406	Takifugu rubripes	68.18	0.00e+00	1221.00
IUUC-Tsy-119170	Tarsius syrichta	93.54	0.00e+00	1693.00
IUUC-Tni-119721	Tetraodon nigroviridis	66.63	0.00e+00	1192.00
IUUC-Tca-121761	Theobroma cacao	39.07	0.00e+00	643.00
IUUC-Tre-121908	Trichoderma reesei	36.63	7.00e-172	597.00
IUUC-Tvi-122547	Trichoderma virens	37.54	7.00e-175	607.00
IUUC-Tae-125496	Triticum aestivum	39.28	5.00e-165	575.00
IUUC-Tur-126811	Triticum urartu	40.88	7.00e-165	574.00
IUUC-Tme-126987	Tuber melanosporum	38.87	0.00e+00	647.00
IUUC-Tbe-127315	Tupaia belangeri	95.60	0.00e+00	887.00
IUUC-Ttr-129165	Tursiops truncatus	85.47	0.00e+00	1452.00
IUUC-Uma-129651	Ustilago maydis	34.80	2.00e-155	543.00
IUUC-Vda-129973	Verticillium dahliae	38.41	1.00e-167	584.00
IUUC-Vpa-130163	Vicugna pacos	85.81	0.00e+00	748.00
IUUC-Vvi-131402	Vitis vinifera	37.62	0.00e+00	627.00
IUUC-Xtr-132296	Xenopus tropicalis	73.06	0.00e+00	1296.00
IUUC-Xma-133028	Xiphophorus maculatus	69.04	0.00e+00	1286.00
IUUC-Yli-134484	Yarrowia lipolytica	38.76	5.00e-164	571.00
IUUC-Zma-135938	Zea mays	36.83	9.00e-166	577.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence