iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000001633.7	ENSRNOT00000088152.1	ENSRNOP00000075029.1
ENSRNOG00000001633.7	ENSRNOT00000048417.4	ENSRNOP00000042252.4

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	TRANSFAC	RAID2
Post-translational Modifications (PTMs)
dbPAF	PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	6.10e-18	65.2	11	89

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt...ltelknsevalkYeDedGDlvtlksDedldkavsllaskksllrlliq 82
           +++k++++++ir++ ++ ++++++++L+ ++++    + l+n+ev++kY+DedGDl+t+++++dl++a++    ++++l+l+++
   Q: 11   LIIKAQLGEDIRRIPIH-NEDITYDELVLMMQRvfrGKLLSNDEVTIKYKDEDGDLITIFDSSDLSFAIQ----CSRILKLTLF 89
           579**************.***************98888********************************....9******987 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MNGQLDLSGK LIIKAQLGED IRRIPIHNED ITYDELVLMM QRVFRGKLLS NDEVTIKYKD 60
EDGDLITIFD SSDLSFAIQC SRILKLTLFV NGQPRPLESS QVKYLRRELI ELRNKVNRLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGGACCGATG CCTACCTCCA CCAAGGCTCT CAGAGCAAGC CCAGCCCTGC AGACTACGCC 60
CCGCCCACCG GAGAGAGTTA GCAATTACTA GCTGTCGGGA AAACCGGAAG TGCTGGTAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR000270--PB1_dom
IPR033512--TFG

PROSITE

PS51745--PB1

Pfam

PF00564--PB1

SMART

SM00666--PB1

Gene Ontology

GO:0070062--C:extracellular exosome
GO:0004871--F:signal transducer activity
GO:0043123--P:positive regulation of I-kappaB kinase/NF-kappaB signaling

KEGG

rno:360709

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000264	Aegilops tauschii	24.32	2.70e-02	31.60
IUUC-Atr-002452	Amborella trichopoda	29.31	3.10e-02	32.70
IUUC-Apl-003220	Anas platyrhynchos	89.21	4.00e-116	410.00
IUUC-Aca-004830	Anolis carolinensis	90.43	2.00e-110	391.00
IUUC-Ame-010792	Astyanax mexicanus	82.41	3.00e-49	189.00
IUUC-Bta-012950	Bos taurus	88.28	4.00e-139	487.00
IUUC-Bdi-014647	Brachypodium distachyon	24.32	4.10e-02	31.60
IUUC-Cel-018680	Caenorhabditis elegans	32.46	2.00e-11	63.50
IUUC-Cja-019530	Callithrix jacchus	89.03	7.00e-154	536.00
IUUC-Cfa-020019	Canis familiaris	96.69	8.00e-113	400.00
IUUC-Cpo-021749	Cavia porcellus	95.65	6.00e-118	417.00
IUUC-Csa-023127	Chlorocebus sabaeus	97.05	2.00e-123	434.00
IUUC-Cho-024790	Choloepus hoffmanni	95.38	6.00e-84	304.00
IUUC-Cin-025204	Ciona intestinalis	66.38	3.00e-42	166.00
IUUC-Csv-025833	Ciona savignyi	63.16	8.00e-43	166.00
IUUC-Dre-027850	Danio rerio	79.26	1.00e-75	276.00
IUUC-Dno-029244	Dasypus novemcinctus	95.65	4.00e-118	417.00
IUUC-Dor-030191	Dipodomys ordii	97.94	3.00e-109	388.00
IUUC-Eca-033719	Equus caballus	97.10	2.00e-125	442.00
IUUC-Eeu-035270	Erinaceus europaeus	98.45	9.00e-110	390.00
IUUC-Fca-035804	Felis catus	97.39	4.00e-120	424.00
IUUC-Fal-037426	Ficedula albicollis	91.39	5.00e-110	390.00
IUUC-Gmo-038472	Gadus morhua	78.30	3.00e-92	331.00
IUUC-Gga-040715	Gallus gallus	91.87	7.00e-111	394.00
IUUC-Gac-041966	Gasterosteus aculeatus	78.95	3.00e-94	337.00
IUUC-Gma-042930	Glycine max	23.39	9.00e-03	34.70
IUUC-Hsa-045687	Homo sapiens	96.62	5.00e-122	431.00
IUUC-Hvu-047138	Hordeum vulgare	37.14	6.00e-04	39.30
IUUC-Itr-048521	Ictidomys tridecemlineatus	89.28	1.00e-138	486.00
IUUC-Lch-049822	Latimeria chalumnae	75.69	1.00e-128	452.00
IUUC-Lpe-050724	Leersia perrieri	24.36	1.50e-02	33.10
IUUC-Laf-053735	Loxodonta africana	95.78	7.00e-123	433.00
IUUC-Mcc-054955	Macaca mulatta	97.05	2.00e-122	432.00
IUUC-Mtr-058408	Medicago truncatula	33.93	6.30e-02	31.60
IUUC-Mmr-061160	Microcebus murinus	97.52	1.00e-128	452.00
IUUC-Mdo-062388	Monodelphis domestica	88.19	6.00e-147	513.00
IUUC-Mmu-063730	Mus musculus	99.52	6.00e-118	417.00
IUUC-Mac-065660	Musa acuminata	36.96	7.70e-02	30.00
IUUC-Mpu-065683	Mustela putorius furo	97.11	3.00e-126	444.00
IUUC-Mlu-067270	Myotis lucifugus	95.85	1.00e-124	439.00
IUUC-Nle-069491	Nomascus leucogenys	96.62	9.00e-122	429.00
IUUC-Opr-071160	Ochotona princeps	95.22	5.00e-113	400.00
IUUC-Ont-071943	Oreochromis niloticus	81.34	2.00e-95	342.00
IUUC-Oan-073255	Ornithorhynchus anatinus	94.37	2.00e-115	409.00
IUUC-Ocu-074001	Oryctolagus cuniculus	96.22	2.00e-115	409.00
IUUC-Obr-076745	Oryza brachyantha	30.36	1.60e-01	29.60
IUUC-Ogu-078946	Oryza glumaepatula	23.91	6.90e-02	30.40
IUUC-Oga-088931	Otolemur garnettii	97.05	6.00e-124	437.00
IUUC-Oar-089653	Ovis aries	89.28	2.00e-140	491.00
IUUC-Ptr-091043	Pan troglodytes	96.62	5.00e-122	431.00
IUUC-Pan-092436	Papio anubis	95.45	8.00e-120	423.00
IUUC-Psi-093566	Pelodiscus sinensis	92.31	2.00e-115	409.00
IUUC-Pfo-096649	Poecilia formosa	82.86	3.00e-96	345.00
IUUC-Pab-098182	Pongo abelii	96.20	9.00e-122	429.00
IUUC-Pva-102449	Pteropus vampyrus	84.67	1.00e-61	230.00
IUUC-Sha-106837	Sarcophilus harrisii	88.44	2.00e-139	488.00
IUUC-Sit-110216	Setaria italica	33.93	1.70e-01	30.00
IUUC-Sar-112937	Sorex araneus	93.38	3.00e-68	251.00
IUUC-Sbi-114334	Sorghum bicolor	25.00	6.00e-02	31.20
IUUC-Ssc-115848	Sus scrofa	95.48	2.00e-85	308.00
IUUC-Tgu-117454	Taeniopygia guttata	90.91	9.00e-110	390.00
IUUC-Tru-117548	Takifugu rubripes	85.71	8.00e-92	330.00
IUUC-Tsy-119108	Tarsius syrichta	93.36	1.00e-117	416.00
IUUC-Tni-120677	Tetraodon nigroviridis	81.43	1.00e-94	340.00
IUUC-Tca-121767	Theobroma cacao	32.14	4.30e-02	32.30
IUUC-Tae-123421	Triticum aestivum	24.32	3.30e-02	32.00
IUUC-Tur-126762	Triticum urartu	33.33	1.60e+00	26.90
IUUC-Tbe-127251	Tupaia belangeri	99.48	2.00e-110	392.00
IUUC-Ttr-129157	Tursiops truncatus	91.75	9.00e-152	529.00
IUUC-Vpa-130130	Vicugna pacos	75.81	5.00e-114	404.00
IUUC-Xtr-132566	Xenopus tropicalis	89.71	1.00e-104	373.00
IUUC-Xma-134169	Xiphophorus maculatus	83.81	6.00e-100	357.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence