iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sha-107575

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01126026

Gene Name

RBBP7

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000001584.1	ENSSHAT00000001796.1	ENSSHAP00000001777.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-37	126.2	271	305

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtg 33
           Ht++v+cl+f   s+ +l++Gs D+t+ +WDlr  
   Q: 271  HTAEVNCLSFnpySEFILATGSADKTVALWDLRNL 305
           **********96554568*************9875 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

VLSFSVFEDT VEERVINEEY KIWKKNTPFL YDLVMTHALE WPSLTVQWLP DVTRPEGKDY 60
ALHWLVLGTH TSDEQNHLVV ARVQIPNDDA QFDASHYDSE KGEFGGFGSV TGKIETEIKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCGTAGACC TTGTATTGTG CTAAATGCTG GGGGTGAAGC TCACATTCTA TCTATATTTC 60
CCTGTTCTGA GGGTTTAGCT TCTTTGAATT CCTAGAACAG TTAAACATTT TAATTAGTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0035098--C:ESC/E(Z) complex
GO:0016581--C:NuRD complex
GO:0003723--F:RNA binding
GO:0070370--P:cellular heat acclimation
GO:0030308--P:negative regulation of cell growth
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001256	Ailuropoda melanoleuca	96.44	0.00e+00	841.00
IUUC-Apl-003357	Anas platyrhynchos	94.85	0.00e+00	830.00
IUUC-Aly-006342	Arabidopsis lyrata	68.25	9.00e-166	576.00
IUUC-Ath-006855	Arabidopsis thaliana	68.50	2.00e-166	577.00
IUUC-Bta-013455	Bos taurus	95.29	0.00e+00	839.00
IUUC-Bol-015856	Brassica oleracea	68.15	5.00e-166	577.00
IUUC-Cja-019957	Callithrix jacchus	96.20	0.00e+00	839.00
IUUC-Cfa-020917	Canis familiaris	96.44	0.00e+00	842.00
IUUC-Cpo-022173	Cavia porcellus	95.29	0.00e+00	840.00
IUUC-Csa-023738	Chlorocebus sabaeus	95.29	0.00e+00	840.00
IUUC-Dno-029206	Dasypus novemcinctus	95.53	0.00e+00	842.00
IUUC-Dor-030733	Dipodomys ordii	83.14	0.00e+00	708.00
IUUC-Eca-034138	Equus caballus	96.44	0.00e+00	842.00
IUUC-Fca-035977	Felis catus	96.44	0.00e+00	841.00
IUUC-Gga-040764	Gallus gallus	96.24	0.00e+00	844.00
IUUC-Gac-042627	Gasterosteus aculeatus	92.65	0.00e+00	811.00
IUUC-Hsa-045677	Homo sapiens	95.29	0.00e+00	840.00
IUUC-Itr-048060	Ictidomys tridecemlineatus	96.42	0.00e+00	838.00
IUUC-Lch-050545	Latimeria chalumnae	96.19	0.00e+00	845.00
IUUC-Loc-052050	Lepisosteus oculatus	92.92	0.00e+00	820.00
IUUC-Laf-053973	Loxodonta africana	96.45	0.00e+00	845.00
IUUC-Mcc-055687	Macaca mulatta	95.29	0.00e+00	840.00
IUUC-Mmr-061008	Microcebus murinus	96.20	0.00e+00	841.00
IUUC-Mdo-062817	Monodelphis domestica	99.76	0.00e+00	869.00
IUUC-Mmu-063773	Mus musculus	95.53	0.00e+00	842.00
IUUC-Mpu-066722	Mustela putorius furo	96.44	0.00e+00	841.00
IUUC-Mlu-067813	Myotis lucifugus	96.44	0.00e+00	841.00
IUUC-Nle-070023	Nomascus leucogenys	96.20	0.00e+00	840.00
IUUC-Oan-073579	Ornithorhynchus anatinus	98.82	0.00e+00	867.00
IUUC-Ocu-074778	Oryctolagus cuniculus	95.06	0.00e+00	839.00
IUUC-Oga-088987	Otolemur garnettii	89.34	0.00e+00	757.00
IUUC-Oar-090250	Ovis aries	95.98	0.00e+00	837.00
IUUC-Ptr-091598	Pan troglodytes	96.44	0.00e+00	841.00
IUUC-Pan-092412	Papio anubis	95.29	0.00e+00	840.00
IUUC-Psi-093162	Pelodiscus sinensis	98.72	0.00e+00	799.00
IUUC-Pab-097865	Pongo abelii	95.29	0.00e+00	840.00
IUUC-Pva-102369	Pteropus vampyrus	96.44	0.00e+00	843.00
IUUC-Rno-105892	Rattus norvegicus	95.29	0.00e+00	840.00
IUUC-Sar-113236	Sorex araneus	87.74	0.00e+00	739.00
IUUC-Ssc-116352	Sus scrofa	96.44	0.00e+00	843.00
IUUC-Tsy-118854	Tarsius syrichta	96.20	0.00e+00	840.00
IUUC-Tbe-128010	Tupaia belangeri	85.27	0.00e+00	733.00
IUUC-Ttr-128558	Tursiops truncatus	84.80	0.00e+00	723.00
IUUC-Vpa-130664	Vicugna pacos	96.67	0.00e+00	842.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence