iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-115712

Ensembl Protein ID

ENSSSCP00000010090.2

UniProt Accession

F1RJ44; F1RJ44_PIG

Genbank Protein ID

ENSSSCP00000010090

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU302264

Gene Name

TDRD3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000009449.2	ENSSSCT00000010359.2	ENSSSCP00000010090.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	2.00e-08	34.4	288	325

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           de +l  ++eMGF++e+ +qaL +++nnleaA++ Ll+
   Q: 288  DEKALKHITEMGFSKEASRQALMDNGNNLEAALNVLLN 325
           78999*******************************97 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MADVSSAALS QAGWYLSDEG IEACTSSPEK VNINDIILIA LNTDLRTIGK KFLPSDINGG 60
KVEKLEGPCV LQIQKIRNVA APKDNEESQA APRMLRLQMT DGHISCTAVE FSYMSKLSLN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGACG TCTCCAGCGC GGCGTTGTCC CAGGCGGGTT GGTAAGTGGC GAGTGCCGCC 60
GGCCGCGGGC GCGGGCCGGG GCCCGAGGAG GGTTGGGGTT GGGGGCGGTG GGGTGCGTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR033472--DUF1767
IPR013894--RMI1_N
IPR002999--Tudor
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50304--TUDOR
PS50030--UBA

Pfam

PF08585--RMI1_N
PF00567--TUDOR
PF00627--UBA

SMART

SM01161--DUF1767
SM00333--TUDOR
SM00165--UBA

KEGG

ssc:100153172

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000323	Aegilops tauschii	32.54	1.00e-15	77.00
IUUC-Aml-001751	Ailuropoda melanoleuca	94.95	0.00e+00	1338.00
IUUC-Atr-002788	Amborella trichopoda	31.22	1.00e-20	94.00
IUUC-Apl-004055	Anas platyrhynchos	76.57	0.00e+00	951.00
IUUC-Aca-004367	Anolis carolinensis	71.98	0.00e+00	1022.00
IUUC-Aly-006072	Arabidopsis lyrata	35.67	1.00e-22	100.00
IUUC-Ath-007491	Arabidopsis thaliana	35.03	5.00e-22	98.60
IUUC-Ame-011439	Astyanax mexicanus	67.67	6.00e-107	381.00
IUUC-Bta-012894	Bos taurus	89.53	0.00e+00	1296.00
IUUC-Bdi-014462	Brachypodium distachyon	30.26	5.00e-21	95.10
IUUC-Bol-015343	Brassica oleracea	39.47	1.00e-23	103.00
IUUC-Bra-016787	Brassica rapa	37.74	4.00e-23	101.00
IUUC-Cel-018154	Caenorhabditis elegans	32.66	3.00e-27	116.00
IUUC-Cja-019364	Callithrix jacchus	92.33	0.00e+00	1166.00
IUUC-Cfa-021166	Canis familiaris	93.05	0.00e+00	1295.00
IUUC-Cpo-021678	Cavia porcellus	81.92	0.00e+00	953.00
IUUC-Csa-023299	Chlorocebus sabaeus	91.14	0.00e+00	1371.00
IUUC-Cho-024694	Choloepus hoffmanni	95.82	1.00e-139	489.00
IUUC-Cin-025191	Ciona intestinalis	41.81	4.00e-44	170.00
IUUC-Csv-026348	Ciona savignyi	52.94	1.00e-12	64.30
IUUC-Dre-028715	Danio rerio	50.39	5.00e-173	600.00
IUUC-Dno-030091	Dasypus novemcinctus	88.86	0.00e+00	1301.00
IUUC-Dor-030807	Dipodomys ordii	79.29	0.00e+00	977.00
IUUC-Dse-031459	Dothistroma septosporum	23.47	1.10e-01	31.60
IUUC-Dme-031770	Drosophila melanogaster	32.98	5.00e-43	169.00
IUUC-Ete-032507	Echinops telfairi	67.66	0.00e+00	687.00
IUUC-Eca-033406	Equus caballus	92.82	0.00e+00	1050.00
IUUC-Eeu-034600	Erinaceus europaeus	81.60	0.00e+00	970.00
IUUC-Fca-035916	Felis catus	94.12	0.00e+00	1323.00
IUUC-Fal-036658	Ficedula albicollis	74.93	0.00e+00	1005.00
IUUC-Gmo-038974	Gadus morhua	57.18	3.00e-103	369.00
IUUC-Gga-040195	Gallus gallus	76.31	0.00e+00	1082.00
IUUC-Gac-042537	Gasterosteus aculeatus	46.75	5.00e-164	571.00
IUUC-Gma-044234	Glycine max	34.54	1.00e-24	107.00
IUUC-Ggo-044715	Gorilla gorilla	90.21	0.00e+00	1186.00
IUUC-Hsa-045814	Homo sapiens	91.81	0.00e+00	1379.00
IUUC-Hvu-047365	Hordeum vulgare	30.61	5.00e-16	78.60
IUUC-Itr-047866	Ictidomys tridecemlineatus	91.24	0.00e+00	1313.00
IUUC-Kpa-049313	Komagataella pastoris	33.33	1.10e-01	31.60
IUUC-Lch-050393	Latimeria chalumnae	62.55	0.00e+00	824.00
IUUC-Lpe-050691	Leersia perrieri	32.91	2.00e-20	93.60
IUUC-Loc-052859	Lepisosteus oculatus	58.68	0.00e+00	727.00
IUUC-Laf-053953	Loxodonta africana	88.76	0.00e+00	853.00
IUUC-Mcc-055846	Macaca mulatta	90.97	0.00e+00	1344.00
IUUC-Meu-056790	Macropus eugenii	69.53	0.00e+00	851.00
IUUC-Mtr-058749	Medicago truncatula	37.50	4.00e-22	99.00
IUUC-Mla-058959	Melampsora laricipopulina	41.18	1.00e-06	47.00
IUUC-Mga-059656	Meleagris gallopavo	75.03	0.00e+00	999.00
IUUC-Mmr-061089	Microcebus murinus	90.18	0.00e+00	1264.00
IUUC-Mdo-063043	Monodelphis domestica	69.16	0.00e+00	731.00
IUUC-Mmu-063654	Mus musculus	84.30	0.00e+00	1187.00
IUUC-Mac-064947	Musa acuminata	35.79	3.00e-20	92.40
IUUC-Mpu-066115	Mustela putorius furo	93.81	0.00e+00	1069.00
IUUC-Mlu-066974	Myotis lucifugus	87.22	0.00e+00	1178.00
IUUC-Nle-069184	Nomascus leucogenys	91.14	0.00e+00	1367.00
IUUC-Opr-070770	Ochotona princeps	80.21	0.00e+00	1009.00
IUUC-Ont-072040	Oreochromis niloticus	60.40	7.00e-144	504.00
IUUC-Oan-073448	Ornithorhynchus anatinus	85.19	1.00e-67	248.00
IUUC-Ocu-074405	Oryctolagus cuniculus	91.81	0.00e+00	1336.00
IUUC-Oba-075977	Oryza barthii	31.12	1.00e-14	73.90
IUUC-Obr-076298	Oryza brachyantha	31.47	2.00e-19	90.10
IUUC-Ogl-077706	Oryza glaberrima	31.12	9.00e-15	74.30
IUUC-Ogu-078381	Oryza glumaepatula	31.00	3.00e-15	75.50
IUUC-Oin-080150	Oryza indica	31.50	3.00e-15	75.90
IUUC-Ome-081153	Oryza meridionalis	29.30	2.00e-14	73.60
IUUC-Oni-083115	Oryza nivara	31.50	1.00e-14	73.90
IUUC-Opu-083860	Oryza punctata	31.66	6.00e-20	91.70
IUUC-Oru-084859	Oryza rufipogon	31.50	5.00e-15	75.10
IUUC-Osa-085567	Oryza sativa	31.50	8.00e-14	71.20
IUUC-Ola-087049	Oryzias latipes	48.11	9.00e-175	607.00
IUUC-Oga-088455	Otolemur garnettii	90.20	0.00e+00	1324.00
IUUC-Oar-090096	Ovis aries	92.61	0.00e+00	1332.00
IUUC-Ptr-090974	Pan troglodytes	91.26	0.00e+00	1206.00
IUUC-Pan-092657	Papio anubis	90.74	0.00e+00	1368.00
IUUC-Psi-093113	Pelodiscus sinensis	75.38	0.00e+00	935.00
IUUC-Ppa-095466	Physcomitrella patens	38.62	2.00e-23	103.00
IUUC-Pfo-096631	Poecilia formosa	48.88	3.00e-172	598.00
IUUC-Pab-098070	Pongo abelii	91.54	0.00e+00	1376.00
IUUC-Pop-099235	Populus trichocarpa	34.86	3.00e-22	99.80
IUUC-Pca-101032	Procavia capensis	82.67	0.00e+00	1062.00
IUUC-Ppe-101793	Prunus persica	31.47	2.00e-23	103.00
IUUC-Pva-102290	Pteropus vampyrus	90.95	0.00e+00	1164.00
IUUC-Rno-105080	Rattus norvegicus	82.21	0.00e+00	970.00
IUUC-Sha-107598	Sarcophilus harrisii	79.32	0.00e+00	1117.00
IUUC-Sit-110735	Setaria italica	30.50	2.00e-19	89.70
IUUC-Sly-111126	Solanum lycopersicum	40.79	6.00e-21	94.70
IUUC-Stu-112780	Solanum tuberosum	34.05	3.00e-24	105.00
IUUC-Sar-113418	Sorex araneus	89.59	0.00e+00	1103.00
IUUC-Sbi-113925	Sorghum bicolor	31.50	4.00e-20	92.00
IUUC-Sre-114917	Sporisorium reilianum	39.76	1.00e-07	50.40
IUUC-Tgu-117148	Taeniopygia guttata	76.17	0.00e+00	1065.00
IUUC-Tru-117831	Takifugu rubripes	59.35	3.00e-133	469.00
IUUC-Tsy-118917	Tarsius syrichta	88.34	0.00e+00	1084.00
IUUC-Tni-120783	Tetraodon nigroviridis	47.78	7.00e-167	580.00
IUUC-Tca-121430	Theobroma cacao	39.20	2.00e-08	53.50
IUUC-Tae-123752	Triticum aestivum	32.54	1.00e-15	77.40
IUUC-Tur-126238	Triticum urartu	31.05	4.00e-15	75.50
IUUC-Ttr-128615	Tursiops truncatus	87.56	0.00e+00	1085.00
IUUC-Vpa-130531	Vicugna pacos	94.94	0.00e+00	1210.00
IUUC-Vvi-131607	Vitis vinifera	39.07	2.00e-17	83.20
IUUC-Xtr-132787	Xenopus tropicalis	58.95	0.00e+00	734.00
IUUC-Xma-133815	Xiphophorus maculatus	47.80	1.00e-170	593.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence