iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107724

Ensembl Protein ID

EEB08285

UniProt Accession

B6K478; B6K478_SCHJY

Genbank Protein ID

EEB08285.1

Protein Name

Set1C complex subunit Swd2.1

Genbank Nucleotide ID

KE651167

Gene Name

SJAG_03431

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_03431	EEB08285	EEB08285

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.50e-11	39.6	110	146

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvl 35
           gH+d+v +l+    d l++s s D+t+++WD+r+ ++
   Q: 110  GHKDKVISLDVspVDELFLSTSLDNTLRLWDMRSSTC 146
           8*********99655*****************98766 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MATLPIDDNL VSKFRPTKVL RDVEKGKKIT SVNFDDSGEL CLCCSTDDML HLYNCTTGKF 60
VRSFASKKYG AHLACFSHHS TSTVYASTKE GDTLRFLDLN SNRYIRYFVG HKDKVISLDV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAACTTTTTA GACGTCGATG TAAAAACCTT GTTACAATAC TTGCAAAAAT ACTTTGGAAT 60
GCTTTTCCAA TACTCAGTCA TCCTGCTATG AACTGTATTT TAGCAAAACT TTATGTAGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0048188--C:Set1C/COMPASS complex
GO:0051568--P:histone H3-K4 methylation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001221	Ailuropoda melanoleuca	36.59	2.00e-50	190.00
IUUC-Atr-002607	Amborella trichopoda	29.00	7.00e-40	155.00
IUUC-Apl-003817	Anas platyrhynchos	36.70	4.00e-51	194.00
IUUC-Aca-005383	Anolis carolinensis	36.59	1.00e-50	191.00
IUUC-Aly-005437	Arabidopsis lyrata	31.91	4.00e-45	172.00
IUUC-Ath-006793	Arabidopsis thaliana	31.91	3.00e-45	173.00
IUUC-Ago-007804	Ashbya gossypii	33.33	1.00e-52	197.00
IUUC-Afl-008539	Aspergillus flavus	36.50	4.00e-59	219.00
IUUC-Afu-009105	Aspergillus fumigatus	35.91	7.00e-58	215.00
IUUC-Ani-009474	Aspergillus nidulans	36.04	1.00e-58	218.00
IUUC-Ang-009858	Aspergillus niger	35.50	4.00e-57	213.00
IUUC-Aor-009955	Aspergillus oryzae	36.50	4.00e-59	219.00
IUUC-Ate-010364	Aspergillus terreus	37.39	2.00e-60	224.00
IUUC-Ame-010661	Astyanax mexicanus	36.70	4.00e-51	193.00
IUUC-Bta-013022	Bos taurus	36.39	3.00e-49	187.00
IUUC-Bdi-015066	Brachypodium distachyon	33.13	2.00e-43	167.00
IUUC-Bol-016019	Brassica oleracea	32.73	2.00e-45	174.00
IUUC-Bra-017871	Brassica rapa	32.73	1.00e-45	174.00
IUUC-Cel-018276	Caenorhabditis elegans	30.49	4.00e-40	156.00
IUUC-Cja-019309	Callithrix jacchus	36.59	2.00e-50	190.00
IUUC-Cfa-020345	Canis familiaris	36.59	2.00e-50	190.00
IUUC-Cpo-022227	Cavia porcellus	33.94	8.00e-40	155.00
IUUC-Csa-023267	Chlorocebus sabaeus	34.66	2.00e-50	190.00
IUUC-Cme-027288	Cyanidioschyzon merolae	26.37	7.00e-35	139.00
IUUC-Dre-028001	Danio rerio	36.89	8.00e-52	195.00
IUUC-Dno-029056	Dasypus novemcinctus	36.59	2.00e-50	190.00
IUUC-Dse-031152	Dothistroma septosporum	34.29	2.00e-55	207.00
IUUC-Dme-032085	Drosophila melanogaster	34.48	9.00e-52	194.00
IUUC-Eca-033879	Equus caballus	36.76	3.00e-42	164.00
IUUC-Fca-035896	Felis catus	36.59	2.00e-50	190.00
IUUC-Fal-036843	Ficedula albicollis	36.70	4.00e-51	194.00
IUUC-Fso-038386	Fusarium solani	32.85	4.00e-45	173.00
IUUC-Gmo-038506	Gadus morhua	37.80	2.00e-50	191.00
IUUC-Ggr-040090	Gaeumannomyces graminis	36.07	1.00e-57	214.00
IUUC-Gga-040192	Gallus gallus	36.89	5.00e-52	195.00
IUUC-Gac-041551	Gasterosteus aculeatus	37.00	1.00e-52	197.00
IUUC-Gma-044074	Glycine max	32.10	2.00e-43	167.00
IUUC-Ggo-045204	Gorilla gorilla	36.36	1.00e-49	189.00
IUUC-Hsa-045866	Homo sapiens	36.59	2.00e-50	190.00
IUUC-Hvu-047731	Hordeum vulgare	35.56	1.00e-39	154.00
IUUC-Itr-048338	Ictidomys tridecemlineatus	36.59	2.00e-50	190.00
IUUC-Kpa-049249	Komagataella pastoris	40.73	2.00e-64	236.00
IUUC-Lch-050431	Latimeria chalumnae	36.99	2.00e-50	191.00
IUUC-Lpe-050830	Leersia perrieri	33.13	3.00e-43	166.00
IUUC-Laf-054265	Loxodonta africana	40.09	8.00e-41	158.00
IUUC-Mcc-055583	Macaca mulatta	36.59	2.00e-50	190.00
IUUC-Mor-057267	Magnaporthe oryzae	34.90	1.00e-52	197.00
IUUC-Mpo-057502	Magnaporthe poae	36.07	1.00e-57	214.00
IUUC-Mtr-058200	Medicago truncatula	32.21	7.00e-43	165.00
IUUC-Mga-059407	Meleagris gallopavo	37.04	3.00e-44	169.00
IUUC-Mmr-061470	Microcebus murinus	36.59	2.00e-50	190.00
IUUC-Mdo-062860	Monodelphis domestica	34.77	2.00e-50	190.00
IUUC-Mmu-063105	Mus musculus	36.59	2.00e-50	190.00
IUUC-Mpu-066472	Mustela putorius furo	37.04	3.00e-43	166.00
IUUC-Mlu-067073	Myotis lucifugus	36.62	1.00e-49	187.00
IUUC-Nfi-068284	Neosartorya fischeri	36.20	3.00e-58	216.00
IUUC-Nle-069451	Nomascus leucogenys	36.59	2.00e-50	190.00
IUUC-Opr-071112	Ochotona princeps	37.04	3.00e-43	166.00
IUUC-Ont-071988	Oreochromis niloticus	38.23	1.00e-52	198.00
IUUC-Oan-072947	Ornithorhynchus anatinus	36.30	4.00e-43	165.00
IUUC-Ocu-074969	Oryctolagus cuniculus	36.59	2.00e-50	190.00
IUUC-Oba-075394	Oryza barthii	30.63	7.00e-30	121.00
IUUC-Obr-076456	Oryza brachyantha	33.53	1.00e-43	167.00
IUUC-Ogl-076973	Oryza glaberrima	33.43	2.00e-43	167.00
IUUC-Ogu-078296	Oryza glumaepatula	30.63	7.00e-30	121.00
IUUC-Olo-080893	Oryza longistaminata	29.79	1.00e-31	127.00
IUUC-Ome-081559	Oryza meridionalis	38.04	1.00e-25	107.00
IUUC-Oni-083104	Oryza nivara	30.63	7.00e-30	121.00
IUUC-Oru-084364	Oryza rufipogon	30.63	1.00e-29	121.00
IUUC-Ola-087095	Oryzias latipes	38.41	6.00e-53	199.00
IUUC-Oga-088766	Otolemur garnettii	36.59	2.00e-50	190.00
IUUC-Oar-089565	Ovis aries	35.67	7.00e-48	181.00
IUUC-Ptr-091219	Pan troglodytes	34.36	4.00e-50	189.00
IUUC-Pan-091733	Papio anubis	36.59	2.00e-50	190.00
IUUC-Psi-092972	Pelodiscus sinensis	37.69	1.00e-50	192.00
IUUC-Pma-094332	Petromyzon marinus	35.58	3.00e-51	193.00
IUUC-Pno-094960	Phaeosphaeria nodorum	35.40	1.00e-54	204.00
IUUC-Ppa-095546	Physcomitrella patens	32.53	4.00e-49	186.00
IUUC-Pfo-096775	Poecilia formosa	38.23	2.00e-52	197.00
IUUC-Pab-098340	Pongo abelii	34.36	2.00e-50	190.00
IUUC-Pop-098907	Populus trichocarpa	34.03	3.00e-47	180.00
IUUC-Pca-100635	Procavia capensis	36.57	4.00e-41	159.00
IUUC-Ppe-101452	Prunus persica	33.23	6.00e-45	172.00
IUUC-Rno-106127	Rattus norvegicus	35.87	7.00e-46	175.00
IUUC-Sce-106257	Saccharomyces cerevisiae	33.84	3.00e-52	196.00
IUUC-Sha-107529	Sarcophilus harrisii	34.66	1.00e-45	174.00
IUUC-Spo-108206	Schizosaccharomyces pombe	46.65	9.00e-89	318.00
IUUC-Smo-109591	Selaginella moellendorffii	32.32	1.00e-45	174.00
IUUC-Sly-111267	Solanum lycopersicum	34.13	6.00e-48	182.00
IUUC-Sar-113079	Sorex araneus	37.04	3.00e-43	166.00
IUUC-Sbi-114232	Sorghum bicolor	36.44	1.00e-38	150.00
IUUC-Ssc-116386	Sus scrofa	36.59	2.00e-50	190.00
IUUC-Tgu-116465	Taeniopygia guttata	36.67	5.00e-42	163.00
IUUC-Tru-117604	Takifugu rubripes	38.48	4.00e-52	197.00
IUUC-Tni-120237	Tetraodon nigroviridis	38.79	2.00e-51	195.00
IUUC-Tca-121853	Theobroma cacao	31.21	2.00e-43	167.00
IUUC-Tae-124944	Triticum aestivum	33.53	2.00e-45	173.00
IUUC-Tur-126512	Triticum urartu	28.77	9.00e-31	125.00
IUUC-Ttr-128307	Tursiops truncatus	37.04	3.00e-43	166.00
IUUC-Uma-129579	Ustilago maydis	33.53	4.00e-54	202.00
IUUC-Vpa-130091	Vicugna pacos	37.04	3.00e-43	166.00
IUUC-Vvi-131587	Vitis vinifera	31.34	7.00e-44	168.00
IUUC-Xtr-132660	Xenopus tropicalis	38.04	7.00e-52	196.00
IUUC-Xma-133496	Xiphophorus maculatus	38.41	2.00e-53	200.00
IUUC-Yli-134509	Yarrowia lipolytica	38.69	8.00e-62	228.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence