iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131040

UUCD1 version

UUC-ViV-00454

Ensembl Protein ID

VIT_04s0023g03320.t01

UniProt Accession

F6GWN2; F6GWN2_VITVI

Genbank Protein ID

CCB44367.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN594959

Gene Name

VIT_04s0023g03320

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_04s0023g03320	VIT_04s0023g03320.t01	VIT_04s0023g03320.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-17	62.8	183	220

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllks 38
           ++++++++f  ++ +lv++sdD +i+++D+ tg++lk+
   Q: 183  SGRISSMDFhrTSSYLVTASDDESIRLYDVATGTCLKT 220
           5789******6449*********************986 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MEKSKGRRRN MMKSHLCIPR LMRSNTSCKS SSSTTNNRLS PAMSLLERFR EAVFRLIMLT 60
ALSKATSHSG SRDVPRSYYP NEPHHSEAVA DCIEFIKKSA SPGDNRDSTA SSSMDTAMPV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAAGACCAA CGCCCACCGC CAAGATGGAG AAATCCAAAG GAAGAAGGAG GAACATGATG 60
AAGAGCCACT TATGCATCCC CAGGCTCATG AGGAGCAACA CCTCCTGCAA AAGCAGCAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0048188--C:Set1C/COMPASS complex
GO:0003682--F:chromatin binding
GO:0080182--P:histone H3-K4 trimethylation
GO:0009827--P:plant-type cell wall modification

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000390	Aegilops tauschii	72.78	3.00e-147	513.00
IUUC-Aml-001221	Ailuropoda melanoleuca	41.67	4.00e-68	250.00
IUUC-Atr-002607	Amborella trichopoda	81.17	4.00e-163	566.00
IUUC-Apl-003817	Anas platyrhynchos	42.30	5.00e-66	244.00
IUUC-Aca-005383	Anolis carolinensis	41.99	1.00e-67	248.00
IUUC-Aly-005462	Arabidopsis lyrata	83.49	3.00e-165	573.00
IUUC-Ath-006609	Arabidopsis thaliana	82.87	4.00e-164	569.00
IUUC-Acl-008217	Aspergillus clavatus	33.43	6.00e-43	167.00
IUUC-Afl-008539	Aspergillus flavus	33.43	5.00e-43	167.00
IUUC-Afu-009105	Aspergillus fumigatus	34.62	6.00e-45	173.00
IUUC-Ang-009858	Aspergillus niger	34.22	3.00e-43	167.00
IUUC-Aor-009955	Aspergillus oryzae	33.43	5.00e-43	167.00
IUUC-Ate-010364	Aspergillus terreus	35.88	2.00e-44	172.00
IUUC-Ame-010661	Astyanax mexicanus	40.88	1.00e-64	240.00
IUUC-Bta-013022	Bos taurus	41.64	9.00e-65	240.00
IUUC-Bdi-014222	Brachypodium distachyon	72.34	3.00e-145	506.00
IUUC-Bol-015485	Brassica oleracea	81.57	3.00e-162	563.00
IUUC-Bra-016914	Brassica rapa	81.38	3.00e-162	563.00
IUUC-Cel-018276	Caenorhabditis elegans	29.45	4.00e-44	171.00
IUUC-Cja-019309	Callithrix jacchus	41.67	4.00e-68	250.00
IUUC-Cfa-020345	Canis familiaris	41.67	4.00e-68	250.00
IUUC-Csa-023267	Chlorocebus sabaeus	40.38	4.00e-68	250.00
IUUC-Cho-024409	Choloepus hoffmanni	38.60	4.00e-49	187.00
IUUC-Cgl-026516	Colletotrichum gloeosporioides	32.11	2.00e-38	152.00
IUUC-Dre-028001	Danio rerio	41.67	3.00e-68	250.00
IUUC-Dno-029056	Dasypus novemcinctus	41.67	4.00e-68	250.00
IUUC-Ete-033158	Echinops telfairi	41.72	9.00e-68	249.00
IUUC-Eca-033879	Equus caballus	43.37	3.00e-57	215.00
IUUC-Eeu-035229	Erinaceus europaeus	35.41	7.00e-49	186.00
IUUC-Fca-035896	Felis catus	41.67	4.00e-68	250.00
IUUC-Fal-036843	Ficedula albicollis	42.30	5.00e-66	244.00
IUUC-Fox-037858	Fusarium oxysporum	34.05	2.00e-42	165.00
IUUC-Gmo-038506	Gadus morhua	41.07	1.00e-63	236.00
IUUC-Gga-040192	Gallus gallus	42.31	4.00e-69	253.00
IUUC-Gma-042835	Glycine max	87.99	3.00e-177	613.00
IUUC-Ggo-045204	Gorilla gorilla	41.64	6.00e-65	241.00
IUUC-Hsa-045866	Homo sapiens	41.67	4.00e-68	250.00
IUUC-Hvu-047690	Hordeum vulgare	72.17	1.00e-146	511.00
IUUC-Itr-048338	Ictidomys tridecemlineatus	41.67	4.00e-68	250.00
IUUC-Kpa-049249	Komagataella pastoris	36.22	3.00e-46	177.00
IUUC-Lch-050431	Latimeria chalumnae	42.02	1.00e-65	243.00
IUUC-Lpe-050812	Leersia perrieri	70.68	1.00e-138	484.00
IUUC-Laf-054265	Loxodonta africana	39.62	1.00e-51	195.00
IUUC-Mcc-055583	Macaca mulatta	41.67	4.00e-68	250.00
IUUC-Meu-056113	Macropus eugenii	34.29	2.00e-45	175.00
IUUC-Mtr-058607	Medicago truncatula	83.63	1.00e-169	588.00
IUUC-Mla-058815	Melampsora laricipopulina	34.17	2.00e-49	189.00
IUUC-Mga-059407	Meleagris gallopavo	44.14	2.00e-61	227.00
IUUC-Mvi-060411	Microbotryum violaceum	34.41	8.00e-53	200.00
IUUC-Mmr-061470	Microcebus murinus	41.67	4.00e-68	250.00
IUUC-Mdo-062860	Monodelphis domestica	41.67	7.00e-68	249.00
IUUC-Mmu-063105	Mus musculus	41.67	4.00e-68	250.00
IUUC-Mac-064497	Musa acuminata	81.90	4.00e-161	559.00
IUUC-Mpu-066472	Mustela putorius furo	43.36	2.00e-60	224.00
IUUC-Mlu-067073	Myotis lucifugus	41.83	2.00e-66	244.00
IUUC-Nfi-068284	Neosartorya fischeri	34.32	1.00e-44	172.00
IUUC-Nle-069451	Nomascus leucogenys	41.67	4.00e-68	250.00
IUUC-Opr-071112	Ochotona princeps	43.36	2.00e-60	224.00
IUUC-Ont-071988	Oreochromis niloticus	41.51	8.00e-66	244.00
IUUC-Oan-072947	Ornithorhynchus anatinus	43.36	2.00e-60	224.00
IUUC-Ocu-074969	Oryctolagus cuniculus	41.67	4.00e-68	250.00
IUUC-Oba-075229	Oryza barthii	70.36	1.00e-141	495.00
IUUC-Obr-076490	Oryza brachyantha	72.67	3.00e-141	493.00
IUUC-Ogl-077381	Oryza glaberrima	71.83	7.00e-139	485.00
IUUC-Ogu-078068	Oryza glumaepatula	72.64	2.00e-140	490.00
IUUC-Oin-079415	Oryza indica	71.21	1.00e-141	495.00
IUUC-Olo-080773	Oryza longistaminata	62.89	5.00e-116	409.00
IUUC-Ome-081277	Oryza meridionalis	59.94	1.00e-106	378.00
IUUC-Oni-082990	Oryza nivara	70.66	5.00e-142	496.00
IUUC-Opu-083374	Oryza punctata	72.36	8.00e-141	491.00
IUUC-Oru-084354	Oryza rufipogon	70.66	6.00e-142	496.00
IUUC-Osa-086154	Oryza sativa	72.05	3.00e-140	490.00
IUUC-Ola-087095	Oryzias latipes	42.31	2.00e-69	254.00
IUUC-Oga-088766	Otolemur garnettii	41.67	4.00e-68	250.00
IUUC-Oar-089565	Ovis aries	41.67	9.00e-67	246.00
IUUC-Ptr-091219	Pan troglodytes	39.74	1.00e-67	248.00
IUUC-Pan-091733	Papio anubis	41.67	4.00e-68	250.00
IUUC-Psi-092972	Pelodiscus sinensis	41.83	2.00e-64	239.00
IUUC-Pma-094332	Petromyzon marinus	40.71	8.00e-70	256.00
IUUC-Pfo-096775	Poecilia formosa	41.82	5.00e-66	244.00
IUUC-Pab-098340	Pongo abelii	40.06	2.00e-68	251.00
IUUC-Pop-099278	Populus trichocarpa	89.64	4.00e-169	585.00
IUUC-Ppe-101860	Prunus persica	91.22	4.00e-179	619.00
IUUC-Pva-102798	Pteropus vampyrus	41.67	4.00e-68	250.00
IUUC-Rno-106127	Rattus norvegicus	40.58	2.00e-62	231.00
IUUC-Sha-107529	Sarcophilus harrisii	38.02	1.00e-59	222.00
IUUC-Sit-110657	Setaria italica	71.83	3.00e-143	499.00
IUUC-Sly-110867	Solanum lycopersicum	88.92	1.00e-177	614.00
IUUC-Sar-113079	Sorex araneus	43.36	2.00e-60	224.00
IUUC-Sbi-114094	Sorghum bicolor	73.35	3.00e-144	503.00
IUUC-Sre-115157	Sporisorium reilianum	28.65	4.00e-37	147.00
IUUC-Ssc-116386	Sus scrofa	41.67	4.00e-68	250.00
IUUC-Tgu-116465	Taeniopygia guttata	44.00	1.00e-56	213.00
IUUC-Tsy-119314	Tarsius syrichta	31.73	4.00e-33	134.00
IUUC-Tca-121499	Theobroma cacao	68.58	0.00e+00	707.00
IUUC-Tre-122205	Trichoderma reesei	31.71	3.00e-39	154.00
IUUC-Tae-124058	Triticum aestivum	72.78	2.00e-147	514.00
IUUC-Tur-126512	Triticum urartu	73.21	1.00e-125	442.00
IUUC-Ttr-128307	Tursiops truncatus	43.36	2.00e-60	224.00
IUUC-Vpa-130091	Vicugna pacos	43.36	2.00e-60	224.00
IUUC-Xtr-132660	Xenopus tropicalis	41.19	2.00e-66	246.00
IUUC-Xma-133496	Xiphophorus maculatus	42.31	3.00e-69	254.00
IUUC-Yli-134509	Yarrowia lipolytica	31.89	8.00e-45	173.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence