iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058500

Ensembl Protein ID

KEH23318

UniProt Accession

A0A072U288; A0A072U288_MEDTR

Genbank Protein ID

KEH23318.1

Protein Name

Transducin/WD-like repeat-protein

Genbank Nucleotide ID

CM001223

Gene Name

MTR_7g074890

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_7g074890	KEH23318	KEH23318

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-17	63.8	86	119

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH d vt+++f +d + l++++ Dg+++v+ l +
   Q: 86   GHGDAVTGICFsPDgRNLATACADGVVRVFKLED 119
           8***********99899*************9876 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MDELFPIVAF SLLLGAIIAL LFFNTYYRKR QSEVRSIANL NPNPNPNPIV PSSKPLPNKK 60
SNPKHHSSDK DQIKRHHPLD LNTLKGHGDA VTGICFSPDG RNLATACADG VVRVFKLEDA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTTACCAA ATTAAAGATG GAGAGTGTAG CAATATTCCA CGTGTACAAT CCTGCTCTTT 60
CTTCCATCGT CCACCTCATA TAAAACCCCG CCATTTCCAT TACCATTTTC ACCTAAAACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005783--C:endoplasmic reticulum
GO:0016021--C:integral component of membrane

KEGG

mtr:MTR_7g074890

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000109	Aegilops tauschii	66.34	3.00e-74	270.00
IUUC-Aml-002212	Ailuropoda melanoleuca	29.58	9.00e-37	147.00
IUUC-Atr-002903	Amborella trichopoda	66.97	4.00e-171	593.00
IUUC-Apl-003635	Anas platyrhynchos	26.70	3.00e-32	132.00
IUUC-Aca-004472	Anolis carolinensis	30.77	6.00e-33	134.00
IUUC-Aly-005761	Arabidopsis lyrata	74.63	0.00e+00	629.00
IUUC-Ath-007476	Arabidopsis thaliana	72.16	0.00e+00	626.00
IUUC-Ame-011221	Astyanax mexicanus	30.40	1.00e-41	163.00
IUUC-Bta-013186	Bos taurus	28.38	2.00e-35	142.00
IUUC-Bdi-014298	Brachypodium distachyon	66.67	1.00e-142	498.00
IUUC-Bol-015192	Brassica oleracea	69.37	6.00e-173	599.00
IUUC-Bra-017078	Brassica rapa	70.07	1.00e-174	605.00
IUUC-Cel-018602	Caenorhabditis elegans	28.20	5.00e-26	111.00
IUUC-Cja-018909	Callithrix jacchus	30.11	2.00e-35	142.00
IUUC-Cfa-020970	Canis familiaris	29.97	2.00e-37	149.00
IUUC-Cpo-022215	Cavia porcellus	30.11	7.00e-36	144.00
IUUC-Cre-022949	Chlamydomonas reinhardtii	44.32	3.00e-38	150.00
IUUC-Csa-023530	Chlorocebus sabaeus	29.45	3.00e-36	145.00
IUUC-Cho-024598	Choloepus hoffmanni	30.53	6.00e-23	101.00
IUUC-Cin-025486	Ciona intestinalis	25.88	2.00e-28	119.00
IUUC-Csv-025930	Ciona savignyi	24.18	6.00e-23	101.00
IUUC-Dre-027507	Danio rerio	29.26	2.00e-38	152.00
IUUC-Dno-029726	Dasypus novemcinctus	29.01	3.00e-34	139.00
IUUC-Dor-030501	Dipodomys ordii	33.02	5.00e-31	127.00
IUUC-Ete-032794	Echinops telfairi	34.25	4.00e-32	130.00
IUUC-Eca-033982	Equus caballus	32.11	1.00e-33	137.00
IUUC-Eeu-035090	Erinaceus europaeus	31.51	9.00e-31	127.00
IUUC-Fca-035944	Felis catus	29.84	7.00e-38	150.00
IUUC-Fal-036992	Ficedula albicollis	27.98	4.00e-35	141.00
IUUC-Gmo-038710	Gadus morhua	30.83	2.00e-40	159.00
IUUC-Gga-040885	Gallus gallus	34.55	3.00e-28	117.00
IUUC-Gac-041922	Gasterosteus aculeatus	29.87	1.00e-38	153.00
IUUC-Gma-043534	Glycine max	84.72	0.00e+00	695.00
IUUC-Ggo-045172	Gorilla gorilla	28.86	2.00e-34	139.00
IUUC-Hsa-045711	Homo sapiens	29.15	5.00e-35	141.00
IUUC-Itr-048196	Ictidomys tridecemlineatus	29.19	4.00e-36	144.00
IUUC-Lch-049739	Latimeria chalumnae	29.83	1.00e-38	153.00
IUUC-Lpe-050795	Leersia perrieri	62.99	9.00e-119	419.00
IUUC-Loc-052113	Lepisosteus oculatus	28.77	3.00e-36	145.00
IUUC-Laf-053751	Loxodonta africana	29.92	9.00e-38	150.00
IUUC-Mcc-055022	Macaca mulatta	29.45	4.00e-36	145.00
IUUC-Meu-056003	Macropus eugenii	28.12	2.00e-35	142.00
IUUC-Mga-059278	Meleagris gallopavo	31.05	8.00e-29	120.00
IUUC-Mmr-061148	Microcebus murinus	30.52	1.00e-38	153.00
IUUC-Mdo-063002	Monodelphis domestica	28.02	4.00e-30	125.00
IUUC-Mmu-063607	Mus musculus	29.19	4.00e-35	141.00
IUUC-Mac-065359	Musa acuminata	64.68	2.00e-161	561.00
IUUC-Mpu-066323	Mustela putorius furo	30.95	4.00e-35	141.00
IUUC-Mlu-067946	Myotis lucifugus	29.19	3.00e-37	148.00
IUUC-Nle-069019	Nomascus leucogenys	29.15	3.00e-35	142.00
IUUC-Opr-071047	Ochotona princeps	28.65	2.00e-35	143.00
IUUC-Ont-071694	Oreochromis niloticus	31.82	2.00e-39	155.00
IUUC-Ocu-074493	Oryctolagus cuniculus	29.26	6.00e-35	140.00
IUUC-Oba-075468	Oryza barthii	63.17	3.00e-145	507.00
IUUC-Obr-076681	Oryza brachyantha	67.79	9.00e-137	479.00
IUUC-Ogl-077870	Oryza glaberrima	63.17	3.00e-145	507.00
IUUC-Ogu-078536	Oryza glumaepatula	63.17	2.00e-145	508.00
IUUC-Oin-080175	Oryza indica	63.17	3.00e-145	507.00
IUUC-Olo-080796	Oryza longistaminata	67.47	3.00e-142	497.00
IUUC-Oni-082076	Oryza nivara	63.17	3.00e-145	507.00
IUUC-Opu-083267	Oryza punctata	66.93	7.00e-147	513.00
IUUC-Oru-084553	Oryza rufipogon	62.93	1.00e-144	505.00
IUUC-Osa-085389	Oryza sativa	63.17	3.00e-145	507.00
IUUC-Ola-086414	Oryzias latipes	31.82	9.00e-42	163.00
IUUC-Oga-088656	Otolemur garnettii	30.25	2.00e-36	145.00
IUUC-Oar-089719	Ovis aries	28.12	7.00e-36	144.00
IUUC-Ptr-091087	Pan troglodytes	29.15	5.00e-35	141.00
IUUC-Pan-091709	Papio anubis	29.45	4.00e-36	145.00
IUUC-Psi-093265	Pelodiscus sinensis	26.82	7.00e-34	137.00
IUUC-Ppa-095365	Physcomitrella patens	59.74	2.00e-130	458.00
IUUC-Pfo-097494	Poecilia formosa	29.83	7.00e-40	157.00
IUUC-Pab-098362	Pongo abelii	29.45	1.00e-35	143.00
IUUC-Pop-099163	Populus trichocarpa	72.35	3.00e-167	580.00
IUUC-Pca-101019	Procavia capensis	33.79	2.00e-32	132.00
IUUC-Ppe-102101	Prunus persica	74.71	0.00e+00	641.00
IUUC-Pva-102849	Pteropus vampyrus	30.11	1.00e-36	147.00
IUUC-Rno-105511	Rattus norvegicus	28.92	7.00e-35	140.00
IUUC-Sha-107265	Sarcophilus harrisii	28.38	3.00e-35	142.00
IUUC-Smo-108866	Selaginella moellendorffii	58.77	2.00e-122	431.00
IUUC-Sit-110806	Setaria italica	67.61	4.00e-142	497.00
IUUC-Sly-110994	Solanum lycopersicum	70.68	0.00e+00	627.00
IUUC-Stu-112493	Solanum tuberosum	79.93	2.00e-132	463.00
IUUC-Sar-113628	Sorex araneus	30.08	9.00e-36	144.00
IUUC-Sbi-114397	Sorghum bicolor	68.36	2.00e-146	511.00
IUUC-Ssc-116418	Sus scrofa	29.29	2.00e-38	152.00
IUUC-Tgu-117054	Taeniopygia guttata	27.30	4.00e-36	144.00
IUUC-Tru-118504	Takifugu rubripes	30.40	2.00e-41	162.00
IUUC-Tni-120254	Tetraodon nigroviridis	30.48	2.00e-41	162.00
IUUC-Tca-121085	Theobroma cacao	76.70	0.00e+00	646.00
IUUC-Tae-124791	Triticum aestivum	65.54	9.00e-141	492.00
IUUC-Tur-126756	Triticum urartu	57.07	1.00e-121	429.00
IUUC-Tbe-127903	Tupaia belangeri	29.83	2.00e-34	139.00
IUUC-Ttr-129118	Tursiops truncatus	30.10	4.00e-39	154.00
IUUC-Vvi-131125	Vitis vinifera	73.27	0.00e+00	627.00
IUUC-Xtr-132287	Xenopus tropicalis	29.26	1.00e-36	147.00
IUUC-Xma-134246	Xiphophorus maculatus	30.03	5.00e-40	157.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence