iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oga-087911

Ensembl Protein ID

ENSOGAP00000008838.2

UniProt Accession

H0X1H0; H0X1H0_OTOGA

Genbank Protein ID

ENSOGAP00000008838

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03049511

Gene Name

WDR43

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000009879.2	ENSOGAT00000009884.2	ENSOGAP00000008838.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-16	59.5	144	180

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH ++v+cl++ +d + l s+sdD+ i  W++ t+++
   Q: 144  GHDNRVNCLQWhQDsGCLYSCSDDKHIVEWNVQTCKV 180
           8***********7789***********9999988776 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

PRSGAPARGG TRGCRGAGAA MAAGGGGSCD PLAPAGVPCA FSPHSQAYFA LASTDGHLRV 60
WETANNRLHQ EYVPSAHLSG TCTCLAWAPA RLQAKESPQR KKRKSEAVGT SDQVDLLALG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCGCTCCG GGGCGCCTGC GCGCGGGGGA ACACGTGGCT GCCGCGGAGC CGGAGCAGCA 60
ATGGCGGCGG GTGGCGGCGG TAGCTGCGAC CCCCTGGCCC CGGCGGGGGT TCCCTGCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR023302--Pept_S9A_N
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0001650--C:fibrillar center
GO:0003723--F:RNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001865	Ailuropoda melanoleuca	91.69	0.00e+00	1097.00
IUUC-Atr-002533	Amborella trichopoda	21.52	1.00e-23	105.00
IUUC-Apl-003242	Anas platyrhynchos	72.87	0.00e+00	785.00
IUUC-Aca-004607	Anolis carolinensis	71.26	0.00e+00	857.00
IUUC-Aly-006074	Arabidopsis lyrata	25.44	2.00e-15	77.40
IUUC-Ath-007222	Arabidopsis thaliana	25.44	4.00e-15	76.30
IUUC-Ame-011014	Astyanax mexicanus	53.60	6.00e-169	587.00
IUUC-Bta-012605	Bos taurus	91.86	0.00e+00	1090.00
IUUC-Bdi-014072	Brachypodium distachyon	20.99	9.00e-20	92.00
IUUC-Bol-016255	Brassica oleracea	23.91	9.00e-24	105.00
IUUC-Bra-016850	Brassica rapa	25.75	1.00e-24	107.00
IUUC-Cja-019620	Callithrix jacchus	91.10	0.00e+00	1129.00
IUUC-Cfa-020520	Canis familiaris	91.69	0.00e+00	1095.00
IUUC-Cpo-022456	Cavia porcellus	84.59	0.00e+00	1084.00
IUUC-Cho-024726	Choloepus hoffmanni	89.34	0.00e+00	1050.00
IUUC-Cin-025761	Ciona intestinalis	35.86	2.00e-95	343.00
IUUC-Dre-028051	Danio rerio	52.84	4.00e-172	597.00
IUUC-Dno-030031	Dasypus novemcinctus	90.71	0.00e+00	1085.00
IUUC-Dme-031653	Drosophila melanogaster	26.53	4.00e-47	182.00
IUUC-Ete-032863	Echinops telfairi	80.29	7.00e-93	335.00
IUUC-Eca-033243	Equus caballus	91.44	0.00e+00	942.00
IUUC-Eeu-034970	Erinaceus europaeus	86.27	0.00e+00	786.00
IUUC-Fca-036009	Felis catus	88.38	0.00e+00	1115.00
IUUC-Fal-037264	Ficedula albicollis	70.78	0.00e+00	761.00
IUUC-Gmo-039124	Gadus morhua	55.84	6.00e-177	613.00
IUUC-Gga-040862	Gallus gallus	71.67	0.00e+00	847.00
IUUC-Gac-041468	Gasterosteus aculeatus	55.84	0.00e+00	643.00
IUUC-Gma-042795	Glycine max	21.37	5.00e-15	76.30
IUUC-Ggo-044432	Gorilla gorilla	94.09	0.00e+00	1122.00
IUUC-Hsa-047036	Homo sapiens	94.09	0.00e+00	1120.00
IUUC-Itr-048644	Ictidomys tridecemlineatus	92.12	0.00e+00	1115.00
IUUC-Lch-049553	Latimeria chalumnae	66.26	0.00e+00	748.00
IUUC-Laf-053462	Loxodonta africana	89.70	0.00e+00	1108.00
IUUC-Mcc-055239	Macaca mulatta	91.54	0.00e+00	1132.00
IUUC-Mtr-057977	Medicago truncatula	21.96	3.00e-17	83.60
IUUC-Mga-060079	Meleagris gallopavo	72.68	0.00e+00	773.00
IUUC-Mmr-061472	Microcebus murinus	94.59	0.00e+00	1131.00
IUUC-Mdo-061972	Monodelphis domestica	77.04	0.00e+00	1009.00
IUUC-Mmu-063354	Mus musculus	86.32	0.00e+00	1026.00
IUUC-Mac-065064	Musa acuminata	23.72	8.00e-16	78.20
IUUC-Mpu-066877	Mustela putorius furo	90.68	0.00e+00	1089.00
IUUC-Mlu-067476	Myotis lucifugus	83.90	0.00e+00	1068.00
IUUC-Nle-069119	Nomascus leucogenys	91.38	0.00e+00	1134.00
IUUC-Ont-072093	Oreochromis niloticus	56.44	0.00e+00	678.00
IUUC-Oan-072944	Ornithorhynchus anatinus	72.13	0.00e+00	851.00
IUUC-Ocu-074472	Oryctolagus cuniculus	92.06	0.00e+00	1070.00
IUUC-Oba-075009	Oryza barthii	20.10	5.00e-15	76.30
IUUC-Ogl-077189	Oryza glaberrima	19.20	7.00e-15	75.90
IUUC-Oin-079064	Oryza indica	20.10	8.00e-15	75.50
IUUC-Opu-083604	Oryza punctata	19.70	1.00e-13	71.20
IUUC-Oru-084620	Oryza rufipogon	20.10	7.00e-15	75.50
IUUC-Osa-085345	Oryza sativa	20.10	4.00e-15	76.60
IUUC-Ola-086626	Oryzias latipes	54.36	0.00e+00	659.00
IUUC-Ptr-091603	Pan troglodytes	93.92	0.00e+00	1119.00
IUUC-Pan-092569	Papio anubis	91.54	0.00e+00	1132.00
IUUC-Pma-094287	Petromyzon marinus	53.44	0.00e+00	632.00
IUUC-Ppa-095327	Physcomitrella patens	25.16	8.00e-38	152.00
IUUC-Pfo-097292	Poecilia formosa	55.59	0.00e+00	634.00
IUUC-Pab-097878	Pongo abelii	91.00	0.00e+00	1139.00
IUUC-Pop-099418	Populus trichocarpa	22.76	4.00e-19	89.70
IUUC-Pca-100941	Procavia capensis	83.95	0.00e+00	991.00
IUUC-Ppe-101779	Prunus persica	21.16	7.00e-18	85.50
IUUC-Pva-102493	Pteropus vampyrus	81.43	0.00e+00	1024.00
IUUC-Rno-105084	Rattus norvegicus	88.01	0.00e+00	1033.00
IUUC-Sha-107486	Sarcophilus harrisii	80.57	0.00e+00	981.00
IUUC-Smo-108825	Selaginella moellendorffii	22.72	2.00e-20	94.40
IUUC-Sit-110825	Setaria italica	22.19	6.00e-20	92.40
IUUC-Sly-111365	Solanum lycopersicum	23.33	6.00e-20	92.40
IUUC-Stu-112812	Solanum tuberosum	24.10	7.00e-19	89.00
IUUC-Sar-113326	Sorex araneus	90.33	7.00e-143	500.00
IUUC-Sbi-114426	Sorghum bicolor	22.66	1.00e-23	105.00
IUUC-Tgu-116726	Taeniopygia guttata	68.53	0.00e+00	821.00
IUUC-Tru-117848	Takifugu rubripes	55.05	0.00e+00	638.00
IUUC-Tsy-119091	Tarsius syrichta	66.35	7.00e-137	480.00
IUUC-Tni-120591	Tetraodon nigroviridis	55.97	0.00e+00	642.00
IUUC-Tca-121576	Theobroma cacao	20.76	5.00e-20	92.80
IUUC-Tae-125648	Triticum aestivum	20.93	1.00e-17	85.10
IUUC-Tbe-127832	Tupaia belangeri	91.60	0.00e+00	965.00
IUUC-Ttr-128812	Tursiops truncatus	91.79	0.00e+00	963.00
IUUC-Xma-133557	Xiphophorus maculatus	55.42	0.00e+00	634.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence