iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095327

Ensembl Protein ID

PP1S130_294V6.1

UniProt Accession

A9SWT0; A9SWT0_PHYPA

Genbank Protein ID

EDQ64355.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545019

Gene Name

PHYPADRAFT_234339

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S130_294V6	PP1S130_294V6.1	PP1S130_294V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.50e-08	32.9	9	32

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 11   f.sd.tllvsGsdDgtikvWDlrt 32
           f +    l+ +++Dg ik+WD  t
   Q: 9    FhPHgSALALSAGDGRIKIWDSIT 32
           554445688899*********655 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MSPSLFSAFH PHGSALALSA GDGRIKIWDS ITGNLRNELA DLPSLPASTV ASGHLALDYT 60
CMAWGALPSN SSTKKKKKGA KEKGGAAVVV VGTGSGDIIS WDTTLGELKW RASDCHAGSV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTCCTT CACTCTTCTC CGCCTTCCAC CCTCACGGCT CTGCTCTTGC TCTCTCCGCT 60
GGTGATGGCC GTATCAAGGT GAGTTGTTGA TTTTCGCATT GACTCCCCCT CTCTCTCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

SMART

SM00320--WD40

KEGG

ppp:PHYPADRAFT_234339

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001865	Ailuropoda melanoleuca	25.36	5.00e-44	172.00
IUUC-Atr-002533	Amborella trichopoda	34.04	7.00e-93	333.00
IUUC-Apl-003242	Anas platyrhynchos	26.63	3.00e-44	172.00
IUUC-Aca-004607	Anolis carolinensis	25.16	2.00e-43	169.00
IUUC-Aly-006074	Arabidopsis lyrata	31.08	2.00e-63	236.00
IUUC-Ath-007222	Arabidopsis thaliana	30.78	4.00e-61	228.00
IUUC-Ame-011014	Astyanax mexicanus	25.52	1.00e-41	164.00
IUUC-Bta-012605	Bos taurus	25.08	2.00e-44	173.00
IUUC-Bdi-014072	Brachypodium distachyon	32.29	7.00e-81	294.00
IUUC-Bol-016255	Brassica oleracea	33.23	2.00e-80	292.00
IUUC-Bra-017484	Brassica rapa	32.96	1.00e-75	276.00
IUUC-Cja-019620	Callithrix jacchus	25.47	7.00e-44	171.00
IUUC-Cfa-020520	Canis familiaris	25.56	4.00e-44	172.00
IUUC-Cpo-022456	Cavia porcellus	24.06	1.00e-37	150.00
IUUC-Cho-024726	Choloepus hoffmanni	25.25	9.00e-41	160.00
IUUC-Cin-025761	Ciona intestinalis	37.23	3.00e-25	109.00
IUUC-Dre-028051	Danio rerio	26.14	3.00e-40	159.00
IUUC-Dno-030031	Dasypus novemcinctus	25.28	8.00e-44	171.00
IUUC-Dme-031653	Drosophila melanogaster	23.73	6.00e-16	78.60
IUUC-Eca-033243	Equus caballus	25.75	1.00e-39	157.00
IUUC-Eeu-034970	Erinaceus europaeus	24.59	1.00e-30	127.00
IUUC-Fca-036009	Felis catus	25.74	3.00e-45	176.00
IUUC-Fal-037264	Ficedula albicollis	25.23	9.00e-43	167.00
IUUC-Gmo-039124	Gadus morhua	25.41	2.00e-38	153.00
IUUC-Gga-040862	Gallus gallus	27.73	5.00e-32	132.00
IUUC-Gac-041468	Gasterosteus aculeatus	28.83	2.00e-24	106.00
IUUC-Gma-042795	Glycine max	30.65	1.00e-69	256.00
IUUC-Ggo-044432	Gorilla gorilla	25.43	1.00e-43	170.00
IUUC-Hsa-047036	Homo sapiens	25.43	1.00e-43	170.00
IUUC-Hvu-047736	Hordeum vulgare	28.81	2.00e-22	99.00
IUUC-Itr-048644	Ictidomys tridecemlineatus	24.88	1.00e-40	160.00
IUUC-Lch-049553	Latimeria chalumnae	26.11	3.00e-27	116.00
IUUC-Laf-053462	Loxodonta africana	26.21	4.00e-47	182.00
IUUC-Mcc-055239	Macaca mulatta	25.27	2.00e-43	169.00
IUUC-Mtr-057977	Medicago truncatula	32.14	4.00e-74	271.00
IUUC-Mga-060079	Meleagris gallopavo	26.46	2.00e-24	106.00
IUUC-Mmr-061472	Microcebus murinus	24.18	9.00e-42	164.00
IUUC-Mdo-061972	Monodelphis domestica	25.43	1.00e-48	187.00
IUUC-Mmu-063354	Mus musculus	26.27	5.00e-43	168.00
IUUC-Mac-065064	Musa acuminata	37.41	9.00e-77	280.00
IUUC-Mpu-066877	Mustela putorius furo	25.91	2.00e-46	179.00
IUUC-Mlu-067476	Myotis lucifugus	25.62	8.00e-43	167.00
IUUC-Nle-069119	Nomascus leucogenys	25.60	1.00e-43	170.00
IUUC-Ont-072093	Oreochromis niloticus	26.73	4.00e-42	165.00
IUUC-Oan-072944	Ornithorhynchus anatinus	24.91	9.00e-42	164.00
IUUC-Ocu-074472	Oryctolagus cuniculus	26.74	2.00e-26	113.00
IUUC-Oba-075009	Oryza barthii	30.87	3.00e-70	259.00
IUUC-Ogl-077189	Oryza glaberrima	30.79	1.00e-69	256.00
IUUC-Oin-079064	Oryza indica	30.96	7.00e-70	257.00
IUUC-Opu-083604	Oryza punctata	32.17	3.00e-71	262.00
IUUC-Oru-084620	Oryza rufipogon	30.96	9.00e-70	257.00
IUUC-Osa-085345	Oryza sativa	31.37	3.00e-70	258.00
IUUC-Ola-086626	Oryzias latipes	24.29	3.00e-36	145.00
IUUC-Oga-087911	Otolemur garnettii	25.59	3.00e-44	172.00
IUUC-Ptr-091603	Pan troglodytes	25.43	1.00e-43	170.00
IUUC-Pan-092569	Papio anubis	25.27	2.00e-43	169.00
IUUC-Pma-094287	Petromyzon marinus	24.78	2.00e-26	113.00
IUUC-Pfo-097292	Poecilia formosa	26.59	4.00e-24	105.00
IUUC-Pab-097878	Pongo abelii	25.43	1.00e-43	170.00
IUUC-Pop-099418	Populus trichocarpa	33.82	4.00e-85	308.00
IUUC-Pca-100941	Procavia capensis	24.31	2.00e-38	153.00
IUUC-Ppe-101779	Prunus persica	32.85	1.00e-85	309.00
IUUC-Pva-102493	Pteropus vampyrus	24.08	6.00e-21	95.10
IUUC-Rno-105084	Rattus norvegicus	25.12	2.00e-39	156.00
IUUC-Sha-107486	Sarcophilus harrisii	25.16	4.00e-48	185.00
IUUC-Smo-108825	Selaginella moellendorffii	37.19	9.00e-106	376.00
IUUC-Sit-110825	Setaria italica	33.28	2.00e-83	302.00
IUUC-Sly-111365	Solanum lycopersicum	30.97	8.00e-73	267.00
IUUC-Stu-112812	Solanum tuberosum	29.98	3.00e-72	265.00
IUUC-Sar-113326	Sorex araneus	27.80	4.00e-20	92.40
IUUC-Sbi-114426	Sorghum bicolor	34.03	2.00e-85	309.00
IUUC-Tgu-116726	Taeniopygia guttata	26.18	1.00e-50	193.00
IUUC-Tru-117848	Takifugu rubripes	26.05	3.00e-43	169.00
IUUC-Tni-120591	Tetraodon nigroviridis	25.77	2.00e-42	166.00
IUUC-Tca-121576	Theobroma cacao	33.60	2.00e-83	302.00
IUUC-Tae-125648	Triticum aestivum	31.48	2.00e-82	299.00
IUUC-Tbe-127832	Tupaia belangeri	25.41	3.00e-39	155.00
IUUC-Ttr-128812	Tursiops truncatus	25.63	2.00e-40	160.00
IUUC-Xma-133557	Xiphophorus maculatus	24.64	2.00e-34	139.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence