iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099939

Ensembl Protein ID

POPTR_0006s29460.1

UniProt Accession

U5G9C1; U5G9C1_POPTR

Genbank Protein ID

ERP60015.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_1116776; POPTR_0006s29460g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s29460	POPTR_0006s29460.1	POPTR_0006s29460.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/DCX/DWD	35.31	3.00e-53	209.00	IUUC-Hsa-046935

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MKENGNSSFN NSRASHNIGR LGSLVRDNDE FFELISSRFL SETRYSTSIQ AAAARLLMTC 60
SLTWIYPHVF EDPVMENIKA WVMDEATRFP SEDRNWKHDM ERKEGSDSEM LKTYSTGLLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAGTAGATG AAACGAAGAA GGAAGAAGAG GAATTAATCG AGAAAGCGCA GAAATGGATT 60
GATAAAATCA CTTCTTCTCC TGATAATCCT AACCCTACTC TTCTCCACGC TCTTTCCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR006594--LisH
IPR033270--VPRBP/DCAF1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH

SMART

SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0016567--P:protein ubiquitination

KEGG

pop:POPTR_0006s29460g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000876	Aegilops tauschii	51.37	0.00e+00	1449.00
IUUC-Aml-001487	Ailuropoda melanoleuca	35.31	9.00e-63	235.00
IUUC-Apl-004137	Anas platyrhynchos	34.49	1.00e-61	231.00
IUUC-Aca-004721	Anolis carolinensis	34.49	6.00e-61	229.00
IUUC-Ath-007548	Arabidopsis thaliana	59.98	0.00e+00	1019.00
IUUC-Ame-011378	Astyanax mexicanus	35.01	1.00e-62	235.00
IUUC-Bta-012499	Bos taurus	35.24	9.00e-62	232.00
IUUC-Bdi-014023	Brachypodium distachyon	51.25	0.00e+00	1357.00
IUUC-Bra-017818	Brassica rapa	54.71	0.00e+00	1576.00
IUUC-Cel-018657	Caenorhabditis elegans	28.61	3.00e-43	171.00
IUUC-Cja-019341	Callithrix jacchus	35.40	2.00e-62	234.00
IUUC-Cfa-020745	Canis familiaris	35.31	1.00e-62	235.00
IUUC-Cpo-021525	Cavia porcellus	35.06	1.00e-62	234.00
IUUC-Csa-023213	Chlorocebus sabaeus	35.31	1.00e-62	235.00
IUUC-Cin-025759	Ciona intestinalis	29.88	3.00e-53	203.00
IUUC-Dno-029592	Dasypus novemcinctus	35.31	1.00e-62	235.00
IUUC-Dme-031706	Drosophila melanogaster	26.46	5.00e-40	160.00
IUUC-Ete-033014	Echinops telfairi	36.16	1.00e-50	195.00
IUUC-Eca-034424	Equus caballus	35.40	5.00e-62	233.00
IUUC-Eeu-034747	Erinaceus europaeus	33.91	2.00e-61	231.00
IUUC-Fca-035608	Felis catus	35.31	1.00e-62	235.00
IUUC-Fal-037661	Ficedula albicollis	34.49	2.00e-61	231.00
IUUC-Gmo-039173	Gadus morhua	29.15	5.00e-36	146.00
IUUC-Gga-040754	Gallus gallus	34.49	7.00e-62	232.00
IUUC-Gac-042394	Gasterosteus aculeatus	29.95	2.00e-37	150.00
IUUC-Gma-043360	Glycine max	70.03	0.00e+00	1873.00
IUUC-Ggo-044876	Gorilla gorilla	35.31	1.00e-62	235.00
IUUC-Hsa-046935	Homo sapiens	35.31	1.00e-62	235.00
IUUC-Hvu-047505	Hordeum vulgare	53.33	0.00e+00	1400.00
IUUC-Lch-050623	Latimeria chalumnae	35.77	4.00e-65	243.00
IUUC-Lpe-051488	Leersia perrieri	52.96	0.00e+00	1424.00
IUUC-Loc-052384	Lepisosteus oculatus	35.34	4.00e-63	236.00
IUUC-Laf-053421	Loxodonta africana	35.31	1.00e-62	234.00
IUUC-Mcc-055301	Macaca mulatta	35.31	1.00e-62	235.00
IUUC-Meu-056281	Macropus eugenii	35.31	4.00e-63	236.00
IUUC-Mtr-058027	Medicago truncatula	67.14	0.00e+00	2022.00
IUUC-Mga-059987	Meleagris gallopavo	34.49	7.00e-62	232.00
IUUC-Mmr-060718	Microcebus murinus	35.31	1.00e-62	235.00
IUUC-Mdo-062744	Monodelphis domestica	35.31	4.00e-63	236.00
IUUC-Mmu-063088	Mus musculus	34.99	2.00e-61	230.00
IUUC-Mpu-066788	Mustela putorius furo	35.31	1.00e-62	235.00
IUUC-Mlu-067568	Myotis lucifugus	34.48	4.00e-59	223.00
IUUC-Nle-069773	Nomascus leucogenys	35.31	1.00e-62	235.00
IUUC-Opr-070786	Ochotona princeps	30.37	2.00e-43	171.00
IUUC-Ont-072210	Oreochromis niloticus	34.33	2.00e-60	228.00
IUUC-Ocu-074945	Oryctolagus cuniculus	34.57	5.00e-62	233.00
IUUC-Olo-080575	Oryza longistaminata	50.83	0.00e+00	1257.00
IUUC-Ome-081217	Oryza meridionalis	52.34	0.00e+00	1449.00
IUUC-Opu-083522	Oryza punctata	52.65	0.00e+00	1451.00
IUUC-Ola-087313	Oryzias latipes	35.10	4.00e-63	236.00
IUUC-Olu-087714	Ostreococcus lucimarinus	37.25	2.00e-65	244.00
IUUC-Oga-088943	Otolemur garnettii	30.34	9.00e-40	159.00
IUUC-Oar-089356	Ovis aries	35.24	7.00e-62	232.00
IUUC-Psi-093315	Pelodiscus sinensis	34.74	6.00e-62	233.00
IUUC-Ppa-095994	Physcomitrella patens	46.55	0.00e+00	1180.00
IUUC-Pfo-097433	Poecilia formosa	35.10	3.00e-63	237.00
IUUC-Pab-098284	Pongo abelii	33.25	2.00e-55	211.00
IUUC-Pca-100616	Procavia capensis	37.28	2.00e-25	112.00
IUUC-Ppe-102063	Prunus persica	72.90	0.00e+00	2086.00
IUUC-Rno-104955	Rattus norvegicus	34.99	2.00e-61	230.00
IUUC-Sha-107589	Sarcophilus harrisii	35.31	4.00e-63	236.00
IUUC-Sar-112949	Sorex araneus	35.31	2.00e-62	234.00
IUUC-Ssc-116123	Sus scrofa	35.31	6.00e-63	236.00
IUUC-Tgu-117468	Taeniopygia guttata	34.49	1.00e-61	231.00
IUUC-Tru-117804	Takifugu rubripes	34.50	1.00e-57	218.00
IUUC-Tsy-118801	Tarsius syrichta	31.85	1.00e-49	192.00
IUUC-Tni-120578	Tetraodon nigroviridis	35.61	2.00e-61	231.00
IUUC-Tur-126857	Triticum urartu	52.29	0.00e+00	1337.00
IUUC-Tbe-128066	Tupaia belangeri	40.48	3.00e-33	137.00
IUUC-Ttr-128293	Tursiops truncatus	34.99	2.00e-61	231.00
IUUC-Vpa-130272	Vicugna pacos	30.00	7.00e-24	106.00
IUUC-Vvi-131322	Vitis vinifera	70.12	0.00e+00	2071.00
IUUC-Xtr-132357	Xenopus tropicalis	33.77	1.00e-61	231.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence