iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-115886

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

FP325257

Gene Name

GNB3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000000682.2	ENSSSCT00000000743.2	ENSSSCP00000000727.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-38	129.4	53	88
UBD/Beta-Prp	1.70e-52	178.8	46	267

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH ++++++++ +d +llvs+s Dg++ vWD+ t +
   Q: 53   GHLAKIYAMHWaTDsKLLVSASQDGKLIVWDTYTTN 88
           899*********888****************87765 PP

UBD/Beta-Prp

   S: 43   kllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee 131
            + r+l gh a+++a+ +  d+k+lv++s+D+ + vwd  t   vh++   ++ v+++++ psg++++ G+ d++  ++ l++++   +
   Q: 46   RTRRTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVK 134
           55689****************************************************************************99987777 PP
   S: 132  ...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrt 217
               ls h+g  +c ++ + +n +v++s D+t+ lWd++tg+  + + g ht++  sl+++++ k ++sg++d + klwd+++g+c +t
   Q: 135  vsrELSAHTGYLSCCRFLD-DNNIVTSSGDTTCALWDIETGQQKTVFVG-HTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQT 221
           778***************9.566899**********************9.*************************************** PP
   S: 218  lnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlh 263
           ++gh++ ++ + f+pn+e + +gs+D s r++dlr ++ l+t++++
   Q: 222  FTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTTYSHE 267
           ****************************************999883 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MGEMEQLRQE AEQLKKQIAD ARKACADTTL AELVSGLEVV GRVQMRTRRT LRGHLAKIYA 60
MHWATDSKLL VSASQDGKLI VWDTYTTNKV HAIPLRSSWV MTCAYAPSGN FVACGGLDNM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGCTGGGGC AGGTGACGGG CGGGTGTCGC AGCTGAGGGA GTGAGGAGGC GTCCGCAACC 60
GGAGCTGGAA GCCTAGAAGA GGTCCAGTCA GAGCCCAAGT AAGAGGGAGC TGGCCAGGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR001632--Gprotein_B
IPR016346--Guanine_nucleotide-bd_bsu
IPR002469--Peptidase_S9B_N
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00319--GPROTEINB
PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030425--C:dendrite
GO:0070062--C:extracellular exosome
GO:0007165--P:signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000161	Aegilops tauschii	49.26	3.00e-75	274.00
IUUC-Aml-002370	Ailuropoda melanoleuca	98.53	0.00e+00	695.00
IUUC-Atr-002610	Amborella trichopoda	49.68	7.00e-87	313.00
IUUC-Apl-004079	Anas platyrhynchos	93.53	0.00e+00	674.00
IUUC-Aca-004539	Anolis carolinensis	90.29	0.00e+00	654.00
IUUC-Aly-006025	Arabidopsis lyrata	50.32	8.00e-84	303.00
IUUC-Ath-006617	Arabidopsis thaliana	50.97	1.00e-83	302.00
IUUC-Afl-008568	Aspergillus flavus	66.77	3.00e-137	481.00
IUUC-Ani-009213	Aspergillus nidulans	66.17	5.00e-136	476.00
IUUC-Ang-009836	Aspergillus niger	67.37	3.00e-138	484.00
IUUC-Aor-010165	Aspergillus oryzae	66.77	3.00e-137	481.00
IUUC-Bta-012810	Bos taurus	99.12	0.00e+00	699.00
IUUC-Bci-013621	Botrytis cinerea	66.37	6.00e-132	463.00
IUUC-Bdi-014785	Brachypodium distachyon	49.68	6.00e-87	313.00
IUUC-Bol-015759	Brassica oleracea	51.12	1.00e-81	297.00
IUUC-Bra-016695	Brassica rapa	51.60	1.00e-81	296.00
IUUC-Cja-019894	Callithrix jacchus	97.65	0.00e+00	688.00
IUUC-Cfa-020140	Canis familiaris	97.94	0.00e+00	689.00
IUUC-Cpo-021908	Cavia porcellus	98.53	0.00e+00	697.00
IUUC-Csa-023321	Chlorocebus sabaeus	97.35	0.00e+00	686.00
IUUC-Cne-026811	Cryptococcus neoformans	66.07	2.00e-138	484.00
IUUC-Dno-029783	Dasypus novemcinctus	96.14	0.00e+00	625.00
IUUC-Dse-031388	Dothistroma septosporum	66.96	4.00e-138	483.00
IUUC-Ete-032435	Echinops telfairi	90.59	2.00e-179	620.00
IUUC-Eca-034169	Equus caballus	99.12	0.00e+00	698.00
IUUC-Eeu-034631	Erinaceus europaeus	91.88	5.00e-166	576.00
IUUC-Fca-035392	Felis catus	98.24	0.00e+00	693.00
IUUC-Fal-036902	Ficedula albicollis	92.35	0.00e+00	669.00
IUUC-Gga-040655	Gallus gallus	92.08	0.00e+00	659.00
IUUC-Gma-043322	Glycine max	43.99	1.00e-86	313.00
IUUC-Ggo-045346	Gorilla gorilla	97.35	0.00e+00	686.00
IUUC-Hsa-046203	Homo sapiens	97.35	0.00e+00	686.00
IUUC-Hvu-047596	Hordeum vulgare	49.68	8.00e-86	310.00
IUUC-Itr-048501	Ictidomys tridecemlineatus	97.94	0.00e+00	694.00
IUUC-Lpe-051040	Leersia perrieri	49.36	5.00e-87	314.00
IUUC-Loc-052327	Lepisosteus oculatus	87.06	0.00e+00	635.00
IUUC-Lma-052985	Leptosphaeria maculans	65.78	1.00e-136	479.00
IUUC-Laf-053616	Loxodonta africana	97.65	0.00e+00	692.00
IUUC-Mcc-055798	Macaca mulatta	97.35	0.00e+00	686.00
IUUC-Mtr-058752	Medicago truncatula	44.51	1.00e-85	309.00
IUUC-Mga-059516	Meleagris gallopavo	93.53	0.00e+00	673.00
IUUC-Mvi-060482	Microbotryum violaceum	69.88	2.00e-146	511.00
IUUC-Mmr-061701	Microcebus murinus	98.53	0.00e+00	693.00
IUUC-Mdo-061879	Monodelphis domestica	95.59	0.00e+00	679.00
IUUC-Mmu-063132	Mus musculus	97.94	0.00e+00	692.00
IUUC-Mac-064871	Musa acuminata	49.04	2.00e-84	305.00
IUUC-Mpu-066365	Mustela putorius furo	98.82	0.00e+00	699.00
IUUC-Mlu-067628	Myotis lucifugus	97.94	0.00e+00	689.00
IUUC-Nle-069015	Nomascus leucogenys	95.88	0.00e+00	670.00
IUUC-Opr-070261	Ochotona princeps	99.12	0.00e+00	698.00
IUUC-Ocu-074255	Oryctolagus cuniculus	99.12	0.00e+00	698.00
IUUC-Oba-075818	Oryza barthii	47.69	4.00e-84	304.00
IUUC-Obr-076229	Oryza brachyantha	49.04	3.00e-84	305.00
IUUC-Ogl-077730	Oryza glaberrima	49.68	2.00e-87	315.00
IUUC-Ogu-078583	Oryza glumaepatula	49.23	5.00e-69	253.00
IUUC-Oin-079661	Oryza indica	49.04	2.00e-84	305.00
IUUC-Olo-080225	Oryza longistaminata	49.23	5.00e-69	253.00
IUUC-Oni-082161	Oryza nivara	49.36	5.00e-87	314.00
IUUC-Opu-084072	Oryza punctata	49.68	3.00e-87	314.00
IUUC-Oru-084316	Oryza rufipogon	49.04	2.00e-84	305.00
IUUC-Osa-085380	Oryza sativa	49.04	2.00e-84	305.00
IUUC-Oga-088685	Otolemur garnettii	99.12	0.00e+00	698.00
IUUC-Oar-089373	Ovis aries	95.89	0.00e+00	664.00
IUUC-Ptr-090627	Pan troglodytes	94.71	0.00e+00	665.00
IUUC-Pan-092347	Papio anubis	97.35	0.00e+00	684.00
IUUC-Psi-092965	Pelodiscus sinensis	93.53	0.00e+00	674.00
IUUC-Pno-095135	Phaeosphaeria nodorum	65.78	8.00e-137	479.00
IUUC-Ppa-095726	Physcomitrella patens	45.33	9.00e-76	276.00
IUUC-Pab-098335	Pongo abelii	96.76	0.00e+00	684.00
IUUC-Pop-099370	Populus trichocarpa	49.68	2.00e-87	315.00
IUUC-Ppe-102016	Prunus persica	43.79	4.00e-85	307.00
IUUC-Pva-102666	Pteropus vampyrus	98.82	0.00e+00	694.00
IUUC-Pte-104053	Pyrenophora teres	65.78	4.00e-137	480.00
IUUC-Pyt-104426	Pyrenophora triticirepentis	61.58	3.00e-124	437.00
IUUC-Rno-105834	Rattus norvegicus	98.24	0.00e+00	659.00
IUUC-Sha-107128	Sarcophilus harrisii	95.59	0.00e+00	677.00
IUUC-Spo-108352	Schizosaccharomyces pombe	43.33	5.00e-69	254.00
IUUC-Ssl-108539	Sclerotinia sclerotiorum	66.57	8.00e-132	462.00
IUUC-Smo-109652	Selaginella moellendorffii	43.42	5.00e-74	271.00
IUUC-Sit-110441	Setaria italica	49.36	7.00e-87	313.00
IUUC-Sly-111784	Solanum lycopersicum	49.68	8.00e-85	306.00
IUUC-Stu-112400	Solanum tuberosum	49.68	1.00e-84	306.00
IUUC-Sbi-114038	Sorghum bicolor	48.72	1.00e-85	309.00
IUUC-Sre-115035	Sporisorium reilianum	68.47	5.00e-141	493.00
IUUC-Tgu-116461	Taeniopygia guttata	92.65	0.00e+00	671.00
IUUC-Tca-121224	Theobroma cacao	50.00	2.00e-87	315.00
IUUC-Tae-124407	Triticum aestivum	50.00	3.00e-86	311.00
IUUC-Tur-126755	Triticum urartu	49.52	1.00e-86	315.00
IUUC-Tbe-127694	Tupaia belangeri	82.06	8.00e-150	522.00
IUUC-Uma-129589	Ustilago maydis	68.77	5.00e-141	493.00
IUUC-Vvi-131162	Vitis vinifera	50.00	7.00e-87	313.00
IUUC-Xtr-132928	Xenopus tropicalis	88.53	4.00e-179	620.00
IUUC-Yli-134396	Yarrowia lipolytica	31.65	2.00e-62	232.00
IUUC-Zma-135893	Zea mays	48.72	1.00e-85	309.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence