iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002747

Ensembl Protein ID

ERN11278

UniProt Accession

W1PTB2; W1PTB2_AMBTC

Genbank Protein ID

ERN11278.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI392710

Gene Name

AMTR_s00024p00239940

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00024p00239940	ERN11278	ERN11278

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-06	28.8	101	129

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvW 28
           H+ ++ ++af  + +l++s+sdD+t +v+
   Q: 101  HSKDIMSVAFhRSyPLFASCSDDCTAHVF 129
           9999*******5569**********9986 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MLHQLSKKQT HVPIRKFHGL PVSAIFHPSR PTFFIATKRV VLVYDLKKIR LLKKLQTGLR 60
EISSIAIHPG GDNLIIGSKE GKLCWFDLDL SSQAYKTLKN HSKDIMSVAF HRSYPLFASC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTGCACC AGCTCTCGAA AAAACAAACA CATGTTCCAA TTAGGAAATT TCATGGACTC 60
CCTGTTTCTG CCATTTTCCA TCCTTCTCGT CCAACTTTCT TCATTGCAAC TAAGAGGGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0042254--P:ribosome biogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011767	Astyanax mexicanus	55.43	2.00e-54	204.00
IUUC-Cme-027242	Cyanidioschyzon merolae	46.49	6.00e-48	184.00
IUUC-Gga-040631	Gallus gallus	55.43	7.00e-54	202.00
IUUC-Mga-059645	Meleagris gallopavo	49.11	9.00e-24	102.00
IUUC-Oar-090058	Ovis aries	48.50	7.00e-42	164.00
IUUC-Ppa-095634	Physcomitrella patens	68.39	6.00e-68	248.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence