iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cja-019508

Ensembl Protein ID

ENSCJAP00000004239.2

UniProt Accession

F6Y611; F6Y611_CALJA

Genbank Protein ID

JAB05804.1; JAB12449.1; JAB25236.1; JAB36424.1; JAB44870.1

Protein Name

WD repeat-containing protein 13 isoform 1

Genbank Nucleotide ID

ACFV01138309; GAMS01010687; GAMR01008696; GAMQ01005427; GAMP01007885

Gene Name

WDR13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000002328.2	ENSCJAT00000004469.2	ENSCJAP00000004239.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.00e-19	68.6	215	253

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gHt +v+++a+  s+++lvs s D t+++W   +g++++
   Q: 215  GHTRGVSDFAWslSNDILVSTSLDATMRIWASEDGRCIR 253
           8***********987********************9987 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MAAVWQQVLA VDARYNAYRT PTFPQFRTQY IRRRSQLLRE NAKAGHPPAL RRQYLRLRGQ 60
LLGQRYGPLS EPGSARAYSN SIVRSSRTTL DRMEDFEDDP RALGARGHRR SVSRGSYQLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCTCTGGGC TCAGCAGCTC TCGCTGATAG CAGGCGGCCA TCTTGCCTGG AGCCTGAGAA 60
AGGGAGGAGA GACAGAAGGA ACCTGTGAGA GTGGTCTCAG GGCCGCCCCG GGGGGCCTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005815--C:microtubule organizing center
GO:0005654--C:nucleoplasm
GO:0005886--C:plasma membrane
GO:1990841--F:promoter-specific chromatin binding
GO:1904691--P:negative regulation of type B pancreatic cell proliferation

KEGG

cjc:100400145

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001029	Aegilops tauschii	36.18	3.00e-29	122.00
IUUC-Aml-001761	Ailuropoda melanoleuca	99.79	0.00e+00	893.00
IUUC-Atr-002577	Amborella trichopoda	38.60	5.00e-60	225.00
IUUC-Aca-004423	Anolis carolinensis	88.45	0.00e+00	859.00
IUUC-Aly-005453	Arabidopsis lyrata	37.50	5.00e-57	215.00
IUUC-Ath-007256	Arabidopsis thaliana	37.50	2.00e-56	213.00
IUUC-Ame-010600	Astyanax mexicanus	81.65	0.00e+00	712.00
IUUC-Bta-013511	Bos taurus	99.79	0.00e+00	893.00
IUUC-Bdi-014322	Brachypodium distachyon	39.58	2.00e-55	209.00
IUUC-Bol-015992	Brassica oleracea	38.41	6.00e-59	221.00
IUUC-Bra-017399	Brassica rapa	37.80	4.00e-59	222.00
IUUC-Cfa-020273	Canis familiaris	98.97	0.00e+00	885.00
IUUC-Cpo-022002	Cavia porcellus	98.97	0.00e+00	891.00
IUUC-Csa-023862	Chlorocebus sabaeus	99.79	0.00e+00	887.00
IUUC-Cin-025687	Ciona intestinalis	55.33	7.00e-158	550.00
IUUC-Csv-025992	Ciona savignyi	56.30	2.00e-160	558.00
IUUC-Dre-028697	Danio rerio	82.27	0.00e+00	722.00
IUUC-Dno-029208	Dasypus novemcinctus	99.38	0.00e+00	889.00
IUUC-Dor-030316	Dipodomys ordii	98.56	1.00e-110	393.00
IUUC-Eca-033362	Equus caballus	99.53	0.00e+00	766.00
IUUC-Eeu-034599	Erinaceus europaeus	85.48	3.00e-134	471.00
IUUC-Fca-035874	Felis catus	99.59	0.00e+00	891.00
IUUC-Gmo-039176	Gadus morhua	81.07	0.00e+00	714.00
IUUC-Gga-040458	Gallus gallus	77.86	5.00e-62	229.00
IUUC-Gac-041802	Gasterosteus aculeatus	81.24	0.00e+00	742.00
IUUC-Gma-043284	Glycine max	37.88	8.00e-56	211.00
IUUC-Ggo-045546	Gorilla gorilla	99.59	0.00e+00	892.00
IUUC-Hsa-046407	Homo sapiens	99.59	0.00e+00	892.00
IUUC-Hvu-047726	Hordeum vulgare	36.80	2.00e-51	196.00
IUUC-Itr-048939	Ictidomys tridecemlineatus	99.79	0.00e+00	893.00
IUUC-Lpe-051374	Leersia perrieri	40.43	5.00e-57	215.00
IUUC-Loc-052403	Lepisosteus oculatus	75.88	0.00e+00	692.00
IUUC-Laf-053721	Loxodonta africana	99.59	0.00e+00	892.00
IUUC-Mcc-055449	Macaca mulatta	99.79	0.00e+00	887.00
IUUC-Meu-056487	Macropus eugenii	91.75	0.00e+00	878.00
IUUC-Mtr-058659	Medicago truncatula	33.89	2.00e-50	193.00
IUUC-Mmr-061406	Microcebus murinus	99.24	0.00e+00	745.00
IUUC-Mdo-062331	Monodelphis domestica	91.95	0.00e+00	841.00
IUUC-Mmu-064001	Mus musculus	99.18	0.00e+00	887.00
IUUC-Mac-064934	Musa acuminata	37.69	7.00e-56	211.00
IUUC-Mpu-065871	Mustela putorius furo	99.59	0.00e+00	892.00
IUUC-Mlu-067463	Myotis lucifugus	98.14	0.00e+00	868.00
IUUC-Nle-070136	Nomascus leucogenys	99.79	0.00e+00	887.00
IUUC-Opr-070913	Ochotona princeps	90.72	0.00e+00	785.00
IUUC-Ont-071347	Oreochromis niloticus	81.03	0.00e+00	778.00
IUUC-Oan-073527	Ornithorhynchus anatinus	82.91	1.00e-178	619.00
IUUC-Ocu-074829	Oryctolagus cuniculus	94.88	0.00e+00	835.00
IUUC-Oba-075666	Oryza barthii	40.12	1.00e-56	213.00
IUUC-Obr-076413	Oryza brachyantha	40.06	2.00e-56	213.00
IUUC-Ogl-076998	Oryza glaberrima	40.12	8.00e-57	214.00
IUUC-Ogu-078287	Oryza glumaepatula	40.43	3.00e-57	216.00
IUUC-Oin-079359	Oryza indica	40.12	1.00e-56	213.00
IUUC-Olo-080438	Oryza longistaminata	38.53	2.00e-31	129.00
IUUC-Ome-081328	Oryza meridionalis	40.43	5.00e-61	228.00
IUUC-Oni-082574	Oryza nivara	40.12	1.00e-56	213.00
IUUC-Opu-083376	Oryza punctata	37.14	3.00e-50	192.00
IUUC-Oru-085162	Oryza rufipogon	40.12	1.00e-56	214.00
IUUC-Osa-085507	Oryza sativa	40.12	1.00e-56	214.00
IUUC-Ola-087387	Oryzias latipes	79.79	0.00e+00	735.00
IUUC-Oga-088694	Otolemur garnettii	99.59	0.00e+00	892.00
IUUC-Oar-090355	Ovis aries	98.56	0.00e+00	874.00
IUUC-Ptr-091488	Pan troglodytes	97.64	0.00e+00	658.00
IUUC-Pan-092516	Papio anubis	99.79	0.00e+00	887.00
IUUC-Pma-094572	Petromyzon marinus	77.87	0.00e+00	778.00
IUUC-Ppa-096003	Physcomitrella patens	38.02	9.00e-45	174.00
IUUC-Pfo-096819	Poecilia formosa	77.80	0.00e+00	728.00
IUUC-Pab-098373	Pongo abelii	96.27	0.00e+00	872.00
IUUC-Pop-099930	Populus trichocarpa	39.46	1.00e-58	220.00
IUUC-Pca-100248	Procavia capensis	96.08	0.00e+00	870.00
IUUC-Ppe-101592	Prunus persica	37.58	5.00e-53	202.00
IUUC-Pva-102971	Pteropus vampyrus	99.38	0.00e+00	892.00
IUUC-Rno-105386	Rattus norvegicus	97.96	0.00e+00	736.00
IUUC-Sha-106520	Sarcophilus harrisii	89.28	0.00e+00	860.00
IUUC-Smo-108859	Selaginella moellendorffii	41.84	2.00e-62	233.00
IUUC-Sit-109987	Setaria italica	39.16	2.00e-55	210.00
IUUC-Sly-111433	Solanum lycopersicum	36.92	6.00e-56	211.00
IUUC-Stu-112677	Solanum tuberosum	36.36	7.00e-59	221.00
IUUC-Sar-113317	Sorex araneus	97.83	1.00e-147	516.00
IUUC-Sbi-114115	Sorghum bicolor	38.69	4.00e-24	105.00
IUUC-Ssc-115697	Sus scrofa	100.00	2.00e-137	481.00
IUUC-Tru-118749	Takifugu rubripes	80.90	0.00e+00	739.00
IUUC-Tni-119685	Tetraodon nigroviridis	77.14	0.00e+00	684.00
IUUC-Tca-121769	Theobroma cacao	37.76	3.00e-56	213.00
IUUC-Tae-125563	Triticum aestivum	36.43	6.00e-36	144.00
IUUC-Tur-126403	Triticum urartu	35.37	7.00e-28	117.00
IUUC-Tbe-127245	Tupaia belangeri	98.77	1.00e-126	446.00
IUUC-Ttr-128854	Tursiops truncatus	99.38	0.00e+00	918.00
IUUC-Vvi-131113	Vitis vinifera	37.27	2.00e-55	209.00
IUUC-Xtr-132420	Xenopus tropicalis	81.38	0.00e+00	721.00
IUUC-Xma-134302	Xiphophorus maculatus	80.82	0.00e+00	772.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence