iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129862

Ensembl Protein ID

EGY22729

UniProt Accession

G2X2X3; G2X2X3_VERDV

Genbank Protein ID

EGY22729.1

Protein Name

DNA repair protein REV1

Genbank Nucleotide ID

DS572701

Gene Name

VDAG_04167

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_04167	EGY22729	EGY22729

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBM	3.20e-18	63.9	920	945

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBM

   S: 2    PsqvDpeVfsqLPeeiQeEvmaelrq 27
           PsqvDpeVf++LP +  +Ev+a + +
   Q: 920  PSQVDPEVFNALPDDMKAEVLASYGR 945
           9********************98865 PP

Organism

Verticillium dahliae

Functional Description
(View)

Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents.

Protein Sequence
(Fasta)

MGSRLEKNSS QVRKRIEGHT FEDEEGEEYE PSKFGGFDDY FRRKKIKLQN LDANLRAASS 60
DKPPLFKGIV AHVSGYTQPS LSVLHRELVQ HGAGFLQYLD GKTMATHIVA STLPPKKAVE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTTCAC GCCTCGAGAA GAACTCCTCG CAAGTGAGGA AACGCATCGA GGGACACACT 60
TTTGAGGACG AGGAGGGAGA AGAATATGAG CCCAGCAAAT TCGGGGGCTT TGACGACTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0227--DNA damage
KW-0234--DNA repair
KW-0237--DNA synthesis
KW-0238--DNA-binding
KW-0548--Nucleotidyltransferase
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR001357--BRCT_dom
IPR017961--DNA_pol_Y-fam_little_finger
IPR025527--DUF4414
IPR012112--REV1
IPR031991--Rev1_C
IPR001126--UmuC

PROSITE

PS50172--BRCT
PS50173--UMUC

Pfam

PF14377--DUF4414
PF00817--IMS
PF11799--IMS_C
PF16727--REV1_C

SMART

SM00292--BRCT

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0016779--F:nucleotidyltransferase activity
GO:0042276--P:error-prone translesion synthesis

KEGG

vda:VDAG_04167

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000375	Aegilops tauschii	31.33	1.00e-26	113.00
IUUC-Aml-001185	Ailuropoda melanoleuca	31.65	2.00e-94	338.00
IUUC-Atr-002915	Amborella trichopoda	35.35	2.00e-72	266.00
IUUC-Apl-004054	Anas platyrhynchos	34.38	4.00e-77	281.00
IUUC-Aca-004304	Anolis carolinensis	30.85	1.00e-93	336.00
IUUC-Aly-005696	Arabidopsis lyrata	37.99	2.00e-79	288.00
IUUC-Ath-006893	Arabidopsis thaliana	37.88	1.00e-81	296.00
IUUC-Ago-007722	Ashbya gossypii	31.74	5.00e-60	224.00
IUUC-Acl-008347	Aspergillus clavatus	48.69	0.00e+00	1000.00
IUUC-Afl-008444	Aspergillus flavus	58.48	0.00e+00	666.00
IUUC-Afu-008837	Aspergillus fumigatus	49.59	0.00e+00	1033.00
IUUC-Ani-009188	Aspergillus nidulans	46.87	0.00e+00	736.00
IUUC-Ang-009866	Aspergillus niger	52.59	0.00e+00	946.00
IUUC-Aor-010107	Aspergillus oryzae	58.48	0.00e+00	667.00
IUUC-Ate-010359	Aspergillus terreus	48.93	0.00e+00	783.00
IUUC-Ame-010664	Astyanax mexicanus	33.04	4.00e-81	295.00
IUUC-Bgr-012244	Blumeria graminis	43.29	0.00e+00	626.00
IUUC-Bta-013405	Bos taurus	30.82	3.00e-82	298.00
IUUC-Bci-013849	Botrytis cinerea	52.29	0.00e+00	849.00
IUUC-Bdi-014066	Brachypodium distachyon	33.49	6.00e-71	260.00
IUUC-Bol-015544	Brassica oleracea	33.64	3.00e-89	322.00
IUUC-Bra-017792	Brassica rapa	31.34	9.00e-82	296.00
IUUC-Cel-018148	Caenorhabditis elegans	33.71	5.00e-68	251.00
IUUC-Cja-019742	Callithrix jacchus	31.29	1.00e-52	200.00
IUUC-Cfa-020112	Canis familiaris	30.55	5.00e-93	334.00
IUUC-Cpo-022152	Cavia porcellus	30.81	2.00e-92	332.00
IUUC-Cre-022951	Chlamydomonas reinhardtii	43.01	5.00e-33	134.00
IUUC-Csa-023504	Chlorocebus sabaeus	31.34	2.00e-87	315.00
IUUC-Cin-025276	Ciona intestinalis	36.36	3.00e-81	294.00
IUUC-Csv-026283	Ciona savignyi	34.15	1.00e-71	262.00
IUUC-Cgl-026726	Colletotrichum gloeosporioides	63.34	0.00e+00	1454.00
IUUC-Cne-027079	Cryptococcus neoformans	33.12	4.00e-86	311.00
IUUC-Cme-027346	Cyanidioschyzon merolae	28.84	3.00e-49	188.00
IUUC-Dre-028073	Danio rerio	29.55	3.00e-82	298.00
IUUC-Dno-030038	Dasypus novemcinctus	31.71	3.00e-91	328.00
IUUC-Dor-031100	Dipodomys ordii	30.82	9.00e-81	293.00
IUUC-Dse-031310	Dothistroma septosporum	47.06	0.00e+00	989.00
IUUC-Dme-031991	Drosophila melanogaster	30.32	6.00e-82	297.00
IUUC-Ete-033082	Echinops telfairi	44.12	2.00e-46	179.00
IUUC-Eca-033471	Equus caballus	31.15	6.00e-92	330.00
IUUC-Eeu-034993	Erinaceus europaeus	41.37	2.00e-68	252.00
IUUC-Fca-035367	Felis catus	30.90	9.00e-92	330.00
IUUC-Fal-036973	Ficedula albicollis	41.71	5.00e-72	264.00
IUUC-Fox-037677	Fusarium oxysporum	63.27	0.00e+00	934.00
IUUC-Fso-038252	Fusarium solani	59.61	0.00e+00	1348.00
IUUC-Gmo-039669	Gadus morhua	31.26	1.00e-86	313.00
IUUC-Ggr-039988	Gaeumannomyces graminis	53.26	0.00e+00	942.00
IUUC-Gga-040423	Gallus gallus	34.84	9.00e-78	283.00
IUUC-Gac-042134	Gasterosteus aculeatus	34.92	7.00e-79	287.00
IUUC-Gma-042929	Glycine max	30.46	2.00e-91	329.00
IUUC-Ggo-044528	Gorilla gorilla	31.28	2.00e-88	319.00
IUUC-Hsa-046259	Homo sapiens	31.56	3.00e-88	318.00
IUUC-Hvu-047139	Hordeum vulgare	34.64	4.00e-54	203.00
IUUC-Itr-048621	Ictidomys tridecemlineatus	31.17	1.00e-92	333.00
IUUC-Kpa-049169	Komagataella pastoris	37.45	2.00e-84	305.00
IUUC-Lch-050471	Latimeria chalumnae	42.60	2.00e-77	282.00
IUUC-Lpe-050800	Leersia perrieri	35.81	3.00e-77	281.00
IUUC-Loc-052320	Lepisosteus oculatus	28.68	3.00e-48	185.00
IUUC-Lma-053149	Leptosphaeria maculans	46.19	0.00e+00	893.00
IUUC-Laf-053810	Loxodonta africana	31.20	8.00e-85	307.00
IUUC-Mcc-055574	Macaca mulatta	31.18	1.00e-86	313.00
IUUC-Meu-055945	Macropus eugenii	26.25	1.00e-26	114.00
IUUC-Mor-057195	Magnaporthe oryzae	53.41	0.00e+00	1191.00
IUUC-Mpo-057488	Magnaporthe poae	51.64	0.00e+00	1189.00
IUUC-Mtr-057955	Medicago truncatula	37.04	2.00e-86	312.00
IUUC-Mla-059027	Melampsora laricipopulina	35.46	1.00e-81	295.00
IUUC-Mga-060156	Meleagris gallopavo	35.01	4.00e-78	285.00
IUUC-Mvi-060398	Microbotryum violaceum	36.65	1.00e-79	290.00
IUUC-Mmr-061113	Microcebus murinus	31.66	7.00e-85	307.00
IUUC-Mdo-063001	Monodelphis domestica	33.81	4.00e-75	275.00
IUUC-Mmu-063180	Mus musculus	36.02	7.00e-82	297.00
IUUC-Mac-065551	Musa acuminata	36.07	3.00e-40	158.00
IUUC-Mpu-066525	Mustela putorius furo	31.36	5.00e-93	334.00
IUUC-Mlu-067877	Myotis lucifugus	30.90	9.00e-84	303.00
IUUC-Nfi-068418	Neosartorya fischeri	49.51	0.00e+00	1047.00
IUUC-Ncr-068648	Neurospora crassa	50.78	0.00e+00	911.00
IUUC-Nle-069959	Nomascus leucogenys	31.51	1.00e-87	316.00
IUUC-Opr-070522	Ochotona princeps	33.59	2.00e-57	216.00
IUUC-Ont-072293	Oreochromis niloticus	29.29	3.00e-72	265.00
IUUC-Oan-073519	Ornithorhynchus anatinus	42.31	4.00e-78	285.00
IUUC-Ocu-074492	Oryctolagus cuniculus	31.90	1.00e-89	323.00
IUUC-Oba-075567	Oryza barthii	29.26	1.00e-88	320.00
IUUC-Obr-076332	Oryza brachyantha	35.92	6.00e-79	287.00
IUUC-Ogl-077348	Oryza glaberrima	29.26	2.00e-89	322.00
IUUC-Ogu-078779	Oryza glumaepatula	29.29	8.00e-89	320.00
IUUC-Oin-079738	Oryza indica	32.82	1.00e-71	263.00
IUUC-Olo-080701	Oryza longistaminata	32.82	8.00e-72	263.00
IUUC-Ome-081708	Oryza meridionalis	35.51	2.00e-76	279.00
IUUC-Oni-082251	Oryza nivara	29.12	3.00e-86	311.00
IUUC-Opu-083528	Oryza punctata	29.11	3.00e-81	295.00
IUUC-Oru-084293	Oryza rufipogon	28.86	1.00e-84	306.00
IUUC-Osa-085549	Oryza sativa	29.26	2.00e-89	322.00
IUUC-Ola-086793	Oryzias latipes	32.55	8.00e-75	274.00
IUUC-Olu-087786	Ostreococcus lucimarinus	31.86	5.00e-65	240.00
IUUC-Oga-089006	Otolemur garnettii	34.05	4.00e-78	285.00
IUUC-Oar-089597	Ovis aries	31.44	6.00e-91	327.00
IUUC-Ptr-091520	Pan troglodytes	31.42	7.00e-88	317.00
IUUC-Pan-092333	Papio anubis	31.23	5.00e-86	311.00
IUUC-Psi-094004	Pelodiscus sinensis	42.18	2.00e-72	266.00
IUUC-Pma-094128	Petromyzon marinus	31.37	1.00e-43	169.00
IUUC-Pno-094849	Phaeosphaeria nodorum	50.43	0.00e+00	805.00
IUUC-Ppa-095714	Physcomitrella patens	31.15	6.00e-86	310.00
IUUC-Pfo-096569	Poecilia formosa	30.54	8.00e-84	303.00
IUUC-Pab-097960	Pongo abelii	31.36	2.00e-86	312.00
IUUC-Pop-098921	Populus trichocarpa	36.56	1.00e-78	286.00
IUUC-Pca-100509	Procavia capensis	48.21	1.00e-35	144.00
IUUC-Ppe-101730	Prunus persica	32.57	3.00e-84	305.00
IUUC-Pva-102142	Pteropus vampyrus	36.69	4.00e-83	301.00
IUUC-Pgr-103446	Puccinia graminis	31.71	4.00e-68	251.00
IUUC-Ptt-103849	Puccinia triticina	42.62	1.00e-24	107.00
IUUC-Pte-104128	Pyrenophora teres	51.97	0.00e+00	825.00
IUUC-Pyt-104754	Pyrenophora triticirepentis	56.20	0.00e+00	929.00
IUUC-Rno-104871	Rattus norvegicus	31.70	1.00e-89	323.00
IUUC-Sce-106236	Saccharomyces cerevisiae	30.72	9.00e-64	236.00
IUUC-Sha-106962	Sarcophilus harrisii	33.33	2.00e-72	266.00
IUUC-Sja-107691	Schizosaccharomyces japonicus	30.54	2.00e-92	332.00
IUUC-Spo-108170	Schizosaccharomyces pombe	39.82	9.00e-86	310.00
IUUC-Ssl-108668	Sclerotinia sclerotiorum	48.66	0.00e+00	1091.00
IUUC-Smo-109554	Selaginella moellendorffii	34.12	2.00e-67	249.00
IUUC-Sit-110479	Setaria italica	32.63	6.00e-62	230.00
IUUC-Sly-111752	Solanum lycopersicum	29.94	3.00e-88	318.00
IUUC-Stu-112284	Solanum tuberosum	27.14	6.00e-24	103.00
IUUC-Sar-113304	Sorex araneus	35.98	4.00e-87	315.00
IUUC-Sbi-114196	Sorghum bicolor	30.59	5.00e-64	237.00
IUUC-Sre-115151	Sporisorium reilianum	33.85	2.00e-90	326.00
IUUC-Ssc-116104	Sus scrofa	41.57	7.00e-72	264.00
IUUC-Tgu-117438	Taeniopygia guttata	34.00	1.00e-77	283.00
IUUC-Tru-118553	Takifugu rubripes	29.88	5.00e-75	274.00
IUUC-Tsy-119056	Tarsius syrichta	32.03	4.00e-91	328.00
IUUC-Tni-119933	Tetraodon nigroviridis	32.74	6.00e-77	281.00
IUUC-Tca-121376	Theobroma cacao	35.04	1.00e-79	290.00
IUUC-Tre-121972	Trichoderma reesei	56.57	0.00e+00	1205.00
IUUC-Tvi-122342	Trichoderma virens	55.39	0.00e+00	1178.00
IUUC-Tae-123898	Triticum aestivum	29.86	6.00e-87	313.00
IUUC-Tur-126735	Triticum urartu	24.57	6.00e-30	124.00
IUUC-Tme-126999	Tuber melanosporum	40.88	1.00e-124	439.00
IUUC-Tbe-127280	Tupaia belangeri	40.00	3.00e-26	112.00
IUUC-Ttr-129104	Tursiops truncatus	34.72	9.00e-82	296.00
IUUC-Uma-129562	Ustilago maydis	30.96	6.00e-92	331.00
IUUC-Vpa-130819	Vicugna pacos	32.40	5.00e-42	164.00
IUUC-Vvi-131111	Vitis vinifera	36.76	2.00e-83	302.00
IUUC-Xtr-132629	Xenopus tropicalis	30.43	3.00e-84	305.00
IUUC-Xma-134065	Xiphophorus maculatus	30.23	3.00e-85	308.00
IUUC-Yli-134633	Yarrowia lipolytica	35.59	5.00e-76	277.00
IUUC-Zma-135176	Zea mays	33.76	1.00e-86	312.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence