iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000015368.1	ENSSHAT00000018250.1	ENSSHAP00000018101.1
ENSSHAG00000015368.1	ENSSHAT00000018251.1	ENSSHAP00000018102.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	3.50e-11	43.0	76	162

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 1    vqvtvksldgs.eltlkvnpsd.tVaeLKeki.....ekk.lgip.peqqrLiykGkiL...eddktLady.glkdgstihllekksg 75
           v+++v+++++s e+++k ++++ +V+++K+++     e++ l+++ +++++ + kG i+   +++++L+++ +++d++++++l+++++
   Q: 76   VFCVVEHYENSiEYDCK-EEHAeFVLVRKDMLfnqliEMAlLSLGySHSSAAQAKGLIQvgkWNPVPLSYVtDAPDATVADMLQDVYH 162
           689**************.77777*******99999998888*********************************************98 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MDHLNETTQG KEHSEMSNNV SDPKGPPAKI ARLEQNGSPL GRGRLGSTGA KMQGVPLKHS 60
GHLMKTNIRK GTMLPVFCVV EHYENSIEYD CKEEHAEFVL VRKDMLFNQL IEMALLSLGY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

NNNNNNNNNN NNNNNNNNNN GCCCCGGGTA AATAGGAAAG AACAGATCCT CTCTGCTATT 60
TTTAAGAAGA GCGAAGGCTA AATTAAAAGT GGTATTTTAG TGCCTTTTCC CATATTTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0238--DNA-binding
KW-0371--Homeobox
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR003350--CUT_dom
IPR032355--CUTL
IPR009057--Homeobox-like
IPR001356--Homeobox_dom
IPR010982--Lambda_DNA-bd_dom
IPR032392--ULD

PROSITE

PS51042--CUT
PS50071--HOMEOBOX_2

Pfam

PF02376--CUT
PF16557--CUTL
PF00046--Homeobox
PF16534--ULD

SMART

SM01109--CUT
SM00389--HOX

Gene Ontology

GO:0005720--C:nuclear heterochromatin
GO:0016363--C:nuclear matrix
GO:0016605--C:PML body
GO:0003682--F:chromatin binding
GO:0000977--F:RNA polymerase II regulatory region sequence-specific DNA binding
GO:0001227--F:transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding
GO:0050798--P:activated T cell proliferation
GO:0043367--P:CD4-positive, alpha-beta T cell differentiation
GO:0043374--P:CD8-positive, alpha-beta T cell differentiation
GO:0006338--P:chromatin remodeling
GO:0008544--P:epidermis development
GO:0016571--P:histone methylation
GO:0060004--P:reflex
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001269	Ailuropoda melanoleuca	97.43	0.00e+00	1260.00
IUUC-Apl-003442	Anas platyrhynchos	98.15	0.00e+00	1213.00
IUUC-Aca-004969	Anolis carolinensis	97.14	0.00e+00	1202.00
IUUC-Ame-010811	Astyanax mexicanus	68.64	0.00e+00	1088.00
IUUC-Bta-012461	Bos taurus	98.13	0.00e+00	1202.00
IUUC-Cel-018701	Caenorhabditis elegans	34.00	1.00e-10	60.80
IUUC-Cja-020003	Callithrix jacchus	93.98	0.00e+00	1464.00
IUUC-Cfa-020082	Canis familiaris	97.27	0.00e+00	1260.00
IUUC-Cpo-021601	Cavia porcellus	98.81	0.00e+00	1217.00
IUUC-Csa-023306	Chlorocebus sabaeus	98.82	0.00e+00	1221.00
IUUC-Cho-025063	Choloepus hoffmanni	92.00	0.00e+00	979.00
IUUC-Dre-028396	Danio rerio	72.56	0.00e+00	901.00
IUUC-Dno-029755	Dasypus novemcinctus	86.19	0.00e+00	1312.00
IUUC-Dor-030766	Dipodomys ordii	93.70	0.00e+00	1175.00
IUUC-Ete-032547	Echinops telfairi	89.20	9.00e-133	467.00
IUUC-Eca-033394	Equus caballus	92.16	0.00e+00	1412.00
IUUC-Eeu-034706	Erinaceus europaeus	93.07	0.00e+00	1315.00
IUUC-Fca-036482	Felis catus	93.22	0.00e+00	1126.00
IUUC-Fal-037384	Ficedula albicollis	91.17	0.00e+00	1441.00
IUUC-Fso-038109	Fusarium solani	35.59	1.00e-01	32.30
IUUC-Gmo-038956	Gadus morhua	75.21	0.00e+00	680.00
IUUC-Ggr-039906	Gaeumannomyces graminis	33.33	7.00e-03	31.60
IUUC-Gga-040653	Gallus gallus	91.05	0.00e+00	1442.00
IUUC-Gac-041928	Gasterosteus aculeatus	68.51	0.00e+00	805.00
IUUC-Ggo-044842	Gorilla gorilla	94.48	0.00e+00	1474.00
IUUC-Hsa-046800	Homo sapiens	95.72	0.00e+00	1498.00
IUUC-Lch-050515	Latimeria chalumnae	84.62	0.00e+00	1311.00
IUUC-Loc-052600	Lepisosteus oculatus	75.24	0.00e+00	1215.00
IUUC-Laf-054011	Loxodonta africana	95.47	0.00e+00	1459.00
IUUC-Mga-059444	Meleagris gallopavo	97.66	0.00e+00	1206.00
IUUC-Mmr-061285	Microcebus murinus	95.22	0.00e+00	1458.00
IUUC-Mdo-062444	Monodelphis domestica	99.50	0.00e+00	1537.00
IUUC-Mmu-063758	Mus musculus	98.31	0.00e+00	1217.00
IUUC-Mpu-066758	Mustela putorius furo	95.08	0.00e+00	1464.00
IUUC-Mlu-067012	Myotis lucifugus	97.80	0.00e+00	1204.00
IUUC-Nle-069511	Nomascus leucogenys	95.35	0.00e+00	1459.00
IUUC-Opr-070880	Ochotona princeps	78.94	0.00e+00	1151.00
IUUC-Ont-072450	Oreochromis niloticus	73.93	0.00e+00	918.00
IUUC-Oan-073212	Ornithorhynchus anatinus	97.40	3.00e-87	313.00
IUUC-Ocu-074585	Oryctolagus cuniculus	95.22	0.00e+00	1476.00
IUUC-Oba-075370	Oryza barthii	34.78	3.00e-03	35.00
IUUC-Olo-080429	Oryza longistaminata	30.43	3.10e-02	32.70
IUUC-Ome-081450	Oryza meridionalis	32.61	1.50e-02	33.90
IUUC-Oni-082089	Oryza nivara	24.66	2.70e-02	32.00
IUUC-Ola-087463	Oryzias latipes	64.54	0.00e+00	698.00
IUUC-Oga-089020	Otolemur garnettii	95.22	0.00e+00	1457.00
IUUC-Oar-090026	Ovis aries	86.59	0.00e+00	1358.00
IUUC-Ptr-090639	Pan troglodytes	98.81	0.00e+00	1220.00
IUUC-Pan-092418	Papio anubis	97.83	0.00e+00	1113.00
IUUC-Psi-093141	Pelodiscus sinensis	97.62	0.00e+00	1023.00
IUUC-Ppa-095438	Physcomitrella patens	26.88	2.60e-02	33.10
IUUC-Pfo-096325	Poecilia formosa	80.43	0.00e+00	907.00
IUUC-Pab-098180	Pongo abelii	98.81	0.00e+00	1219.00
IUUC-Pca-100487	Procavia capensis	95.76	0.00e+00	1436.00
IUUC-Pva-102302	Pteropus vampyrus	89.25	0.00e+00	1145.00
IUUC-Rno-105734	Rattus norvegicus	98.47	0.00e+00	1217.00
IUUC-Sar-113384	Sorex araneus	98.32	0.00e+00	1217.00
IUUC-Ssc-115971	Sus scrofa	98.13	0.00e+00	1205.00
IUUC-Tgu-117121	Taeniopygia guttata	95.96	0.00e+00	1503.00
IUUC-Tru-118767	Takifugu rubripes	64.47	0.00e+00	711.00
IUUC-Tni-120223	Tetraodon nigroviridis	76.21	0.00e+00	886.00
IUUC-Ttr-128230	Tursiops truncatus	94.20	0.00e+00	1454.00
IUUC-Vpa-130676	Vicugna pacos	90.29	0.00e+00	962.00
IUUC-Xtr-132122	Xenopus tropicalis	88.66	0.00e+00	1071.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence