iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bta-012743

Ensembl Protein ID

ENSBTAP00000042482.2

UniProt Accession

E1BH19; E1BH19_BOVIN

Genbank Protein ID

ENSBTAP00000042482

Protein Name

40S ribosomal protein S30

Genbank Nucleotide ID

DAAA02013312

Gene Name

FAU

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000031786.2	ENSBTAT00000045066.2	ENSBTAP00000042482.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	4.90e-13	48.9	2	70

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 2    qvtvksldgseltlkvnpsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllek 72
           q++v+  +   +tl+v  ++tVa++K ++ +++gi pe+q L+++G +Led  tL+++g+   st+ +  +
   Q: 2    QLFVRAQEL--HTLEVTGQETVAQIKAHVASLEGIAPEDQVLLLAGSPLEDEATLGQCGVEALSTVEVAGR 70
           666776665..9999*************************************************9998866 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MQLFVRAQEL HTLEVTGQET VAQIKAHVAS LEGIAPEDQV LLLAGSPLED EATLGQCGVE 60
ALSTVEVAGR MLRGKVHGSL AHAGKVRGQT PKVAKQEKKT GRAKRRMQYN RRFVNVVPTF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGGTGTCCG CGATCTAGTC GCCAACATGC AGCTTTTTGT CCGCGCCCAG GAGCTACACA 60
CTCTCGAGGT GACCGGCCAG GAGACGGTCG CCCAAATCAA GGCTCATGTA GCTTCGTTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0689--Ribosomal protein

Interpro

IPR006846--Ribosomal_S30
IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF04758--Ribosomal_S30
PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM00213--UBQ

Gene Ontology

GO:0022627--C:cytosolic small ribosomal subunit
GO:0005615--C:extracellular space
GO:0003723--F:RNA binding
GO:0003735--F:structural constituent of ribosome
GO:0019731--P:antibacterial humoral response
GO:0050830--P:defense response to Gram-positive bacterium
GO:0002227--P:innate immune response in mucosa
GO:0006412--P:translation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000894	Aegilops tauschii	72.88	2.00e-18	83.60
IUUC-Aml-001845	Ailuropoda melanoleuca	87.22	1.00e-54	204.00
IUUC-Aca-004403	Anolis carolinensis	75.94	4.00e-46	176.00
IUUC-Ame-010793	Astyanax mexicanus	78.95	2.00e-49	187.00
IUUC-Bgr-012187	Blumeria graminis	62.30	2.00e-10	56.20
IUUC-Bdi-014353	Brachypodium distachyon	72.88	2.00e-18	83.60
IUUC-Cja-019692	Callithrix jacchus	89.47	3.00e-57	213.00
IUUC-Cfa-020250	Canis familiaris	91.73	2.00e-58	216.00
IUUC-Cpo-022140	Cavia porcellus	89.47	5.00e-57	212.00
IUUC-Cre-022769	Chlamydomonas reinhardtii	77.97	5.00e-20	88.60
IUUC-Csa-023775	Chlorocebus sabaeus	90.23	1.00e-57	214.00
IUUC-Cho-024882	Choloepus hoffmanni	90.28	4.00e-33	132.00
IUUC-Cin-025323	Ciona intestinalis	60.90	9.00e-42	161.00
IUUC-Cme-027291	Cyanidioschyzon merolae	66.67	2.00e-15	73.60
IUUC-Dre-027970	Danio rerio	72.18	5.00e-47	179.00
IUUC-Dno-029624	Dasypus novemcinctus	88.72	3.00e-56	210.00
IUUC-Dor-031006	Dipodomys ordii	84.21	8.00e-54	201.00
IUUC-Dse-031318	Dothistroma septosporum	62.30	2.00e-10	56.20
IUUC-Ete-032553	Echinops telfairi	88.64	2.00e-63	233.00
IUUC-Eca-034412	Equus caballus	86.13	1.00e-56	211.00
IUUC-Eeu-034667	Erinaceus europaeus	83.33	5.00e-51	192.00
IUUC-Fca-036244	Felis catus	90.23	1.00e-57	214.00
IUUC-Fox-038012	Fusarium oxysporum	67.21	1.00e-13	67.00
IUUC-Fso-038410	Fusarium solani	63.93	1.00e-13	67.00
IUUC-Gmo-038746	Gadus morhua	75.19	4.00e-47	179.00
IUUC-Gga-041192	Gallus gallus	75.00	2.00e-44	171.00
IUUC-Gac-042368	Gasterosteus aculeatus	78.20	9.00e-53	198.00
IUUC-Ggo-044743	Gorilla gorilla	86.86	2.00e-61	227.00
IUUC-Hsa-046599	Homo sapiens	89.47	4.00e-57	213.00
IUUC-Hvu-047232	Hordeum vulgare	72.88	2.00e-18	83.60
IUUC-Itr-048944	Ictidomys tridecemlineatus	90.23	2.00e-57	214.00
IUUC-Lch-049631	Latimeria chalumnae	72.18	2.00e-45	173.00
IUUC-Loc-051820	Lepisosteus oculatus	75.94	1.00e-46	178.00
IUUC-Laf-053818	Loxodonta africana	87.22	6.00e-56	209.00
IUUC-Mcc-055140	Macaca mulatta	90.23	1.00e-57	214.00
IUUC-Meu-056295	Macropus eugenii	85.71	4.00e-52	196.00
IUUC-Mtr-057879	Medicago truncatula	74.58	5.00e-19	85.50
IUUC-Mvi-060233	Microbotryum violaceum	66.10	2.00e-10	56.60
IUUC-Mmr-060932	Microcebus murinus	87.97	9.00e-56	208.00
IUUC-Mdo-062865	Monodelphis domestica	87.97	2.00e-55	207.00
IUUC-Mmu-063948	Mus musculus	90.23	3.00e-57	213.00
IUUC-Mac-064868	Musa acuminata	67.80	3.00e-16	76.30
IUUC-Mpu-066735	Mustela putorius furo	90.23	1.00e-57	214.00
IUUC-Mlu-067486	Myotis lucifugus	88.72	2.00e-56	210.00
IUUC-Nle-069196	Nomascus leucogenys	90.23	2.00e-57	214.00
IUUC-Opr-070382	Ochotona princeps	87.97	5.00e-56	209.00
IUUC-Ont-072610	Oreochromis niloticus	75.19	3.00e-47	179.00
IUUC-Oan-073263	Ornithorhynchus anatinus	84.96	1.00e-52	198.00
IUUC-Ocu-074061	Oryctolagus cuniculus	89.47	2.00e-57	214.00
IUUC-Ola-087221	Oryzias latipes	75.94	3.00e-48	183.00
IUUC-Oga-088181	Otolemur garnettii	89.47	6.00e-57	212.00
IUUC-Oar-089617	Ovis aries	91.73	2.00e-58	216.00
IUUC-Ptr-090966	Pan troglodytes	89.47	4.00e-57	213.00
IUUC-Pan-091810	Papio anubis	90.23	1.00e-57	214.00
IUUC-Psi-093230	Pelodiscus sinensis	77.44	4.00e-50	189.00
IUUC-Pfo-096700	Poecilia formosa	75.94	2.00e-47	180.00
IUUC-Pab-098743	Pongo abelii	89.47	5.00e-57	212.00
IUUC-Pca-100193	Procavia capensis	86.11	7.00e-30	121.00
IUUC-Pva-102194	Pteropus vampyrus	90.23	1.00e-57	214.00
IUUC-Pte-104130	Pyrenophora teres	62.30	2.00e-10	56.60
IUUC-Rno-105044	Rattus norvegicus	89.23	8.00e-64	234.00
IUUC-Sha-107302	Sarcophilus harrisii	88.72	1.00e-55	207.00
IUUC-Sar-113467	Sorex araneus	88.72	6.00e-57	212.00
IUUC-Ssc-116430	Sus scrofa	90.98	3.00e-58	216.00
IUUC-Tgu-116647	Taeniopygia guttata	69.17	8.00e-36	142.00
IUUC-Tru-117990	Takifugu rubripes	74.44	4.00e-46	176.00
IUUC-Tsy-119146	Tarsius syrichta	87.22	6.00e-55	205.00
IUUC-Tni-120055	Tetraodon nigroviridis	72.09	1.00e-41	161.00
IUUC-Tae-124773	Triticum aestivum	72.88	5.00e-18	87.00
IUUC-Tur-126604	Triticum urartu	72.88	2.00e-18	83.60
IUUC-Tbe-128044	Tupaia belangeri	89.47	2.00e-57	213.00
IUUC-Ttr-128487	Tursiops truncatus	90.23	4.00e-57	213.00
IUUC-Vpa-130497	Vicugna pacos	78.95	7.00e-47	178.00
IUUC-Xtr-132086	Xenopus tropicalis	74.44	4.00e-46	176.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence