iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005882

Ensembl Protein ID

scaffold_603522.1

UniProt Accession

D7LZI0; D7LZI0_ARALL

Genbank Protein ID

EFH48828.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

GL348718

Gene Name

ARALYDRAFT_911465

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_603522.1	scaffold_603522.1	scaffold_603522.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.80e-06	27.0	549	594

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..........sd.tllvsGsdDgtikvWDlrtgvl 35
           gHt+sv cla           s+ + l+sGs D+ti++WDl +g++
   Q: 549  GHTGSVLCLAAhrmfgdangcSSsHVLISGSMDCTIRIWDLESGNV 594
           8*******9655777***99855588***************99976 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MKCRSVACLW SRAPPSHRVT ATASLTNPPT LYTGGSDGSI IWWSISSSSE SNSVTRLSSS 60
EIKPIAMLCG HTAPIVDLAV CDPTTVSGNG VTSDCSDNGN ADPFVNCCAL ISACSDGVLC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTGGTGCTTG ATTCGTGCCG ATGAAGTGCC GATCCGTGGC CTGCCTCTGG TCTCGAGCTC 60
CTCCATCTCA TCGAGTCACC GCCACAGCCT CTCTAACAAA TCCACCGACT CTCTATACCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR016024--ARM-type_fold
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

aly:ARALYDRAFT_911465

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001481	Ailuropoda melanoleuca	22.36	5.00e-10	60.50
IUUC-Atr-002981	Amborella trichopoda	45.47	0.00e+00	1164.00
IUUC-Apl-003943	Anas platyrhynchos	21.88	1.00e-10	61.60
IUUC-Ath-006797	Arabidopsis thaliana	91.56	0.00e+00	2608.00
IUUC-Bta-012912	Bos taurus	22.66	7.00e-11	63.20
IUUC-Bol-016538	Brassica oleracea	83.57	0.00e+00	2268.00
IUUC-Bra-018098	Brassica rapa	80.69	0.00e+00	1488.00
IUUC-Cja-019970	Callithrix jacchus	22.25	6.00e-10	60.10
IUUC-Cfa-020677	Canis familiaris	22.36	4.00e-10	60.80
IUUC-Csa-023786	Chlorocebus sabaeus	22.36	5.00e-10	60.50
IUUC-Cho-024612	Choloepus hoffmanni	22.36	3.00e-10	61.20
IUUC-Cne-026981	Cryptococcus neoformans	21.48	2.00e-15	78.20
IUUC-Dno-029072	Dasypus novemcinctus	22.36	3.00e-10	60.80
IUUC-Dme-031768	Drosophila melanogaster	31.06	2.00e-08	55.10
IUUC-Eca-033496	Equus caballus	22.36	3.00e-10	60.80
IUUC-Fca-035530	Felis catus	22.36	2.00e-10	61.60
IUUC-Gga-041043	Gallus gallus	21.71	8.00e-11	62.40
IUUC-Gma-043201	Glycine max	52.05	0.00e+00	1397.00
IUUC-Ggo-045112	Gorilla gorilla	22.36	7.00e-10	59.70
IUUC-Hsa-046732	Homo sapiens	22.36	6.00e-10	60.10
IUUC-Lch-049569	Latimeria chalumnae	26.97	2.00e-10	61.20
IUUC-Lpe-051544	Leersia perrieri	44.53	0.00e+00	1036.00
IUUC-Mcc-055800	Macaca mulatta	22.36	6.00e-10	60.10
IUUC-Mtr-058676	Medicago truncatula	52.98	0.00e+00	1443.00
IUUC-Mga-059629	Meleagris gallopavo	21.20	2.00e-08	54.70
IUUC-Mmr-061271	Microcebus murinus	22.36	4.00e-10	60.50
IUUC-Mdo-062622	Monodelphis domestica	21.88	1.00e-09	58.90
IUUC-Mmu-063262	Mus musculus	22.51	9.00e-10	59.30
IUUC-Mac-065659	Musa acuminata	47.10	0.00e+00	1066.00
IUUC-Mlu-067288	Myotis lucifugus	21.85	4.00e-10	60.50
IUUC-Nle-069610	Nomascus leucogenys	22.25	3.00e-10	60.80
IUUC-Oan-073095	Ornithorhynchus anatinus	22.14	4.00e-11	63.50
IUUC-Ocu-074257	Oryctolagus cuniculus	22.49	8.00e-10	59.70
IUUC-Oba-075713	Oryza barthii	45.16	0.00e+00	1026.00
IUUC-Obr-076894	Oryza brachyantha	44.48	0.00e+00	1026.00
IUUC-Ogl-077521	Oryza glaberrima	45.24	0.00e+00	1031.00
IUUC-Ogu-078103	Oryza glumaepatula	44.67	0.00e+00	1045.00
IUUC-Oin-080169	Oryza indica	45.05	0.00e+00	1033.00
IUUC-Olo-080818	Oryza longistaminata	41.18	0.00e+00	860.00
IUUC-Ome-081902	Oryza meridionalis	44.97	0.00e+00	1053.00
IUUC-Oni-082333	Oryza nivara	45.05	0.00e+00	1033.00
IUUC-Opu-083952	Oryza punctata	46.00	0.00e+00	1043.00
IUUC-Oru-085112	Oryza rufipogon	44.96	0.00e+00	1028.00
IUUC-Osa-085615	Oryza sativa	39.74	1.00e-139	489.00
IUUC-Oga-088290	Otolemur garnettii	21.84	2.00e-09	58.50
IUUC-Oar-089575	Ovis aries	22.38	1.00e-11	65.90
IUUC-Ptr-091041	Pan troglodytes	22.36	6.00e-10	60.10
IUUC-Pan-092048	Papio anubis	22.36	6.00e-10	60.10
IUUC-Pma-094117	Petromyzon marinus	29.29	4.00e-06	45.80
IUUC-Pab-098194	Pongo abelii	22.36	6.00e-10	60.10
IUUC-Pop-099546	Populus trichocarpa	56.62	0.00e+00	1628.00
IUUC-Ppe-101653	Prunus persica	56.21	0.00e+00	1582.00
IUUC-Pva-102803	Pteropus vampyrus	22.73	1.00e-10	62.40
IUUC-Smo-108766	Selaginella moellendorffii	30.85	2.00e-164	572.00
IUUC-Sly-111516	Solanum lycopersicum	48.44	0.00e+00	1239.00
IUUC-Stu-111982	Solanum tuberosum	49.16	0.00e+00	1284.00
IUUC-Ssc-116213	Sus scrofa	21.66	2.00e-10	60.80
IUUC-Tsy-118970	Tarsius syrichta	22.60	1.00e-10	62.40
IUUC-Tca-121391	Theobroma cacao	55.97	0.00e+00	1377.00
IUUC-Tae-123628	Triticum aestivum	44.20	0.00e+00	1032.00
IUUC-Tur-125959	Triticum urartu	37.40	6.00e-130	457.00
IUUC-Ttr-128200	Tursiops truncatus	23.99	3.00e-08	54.70
IUUC-Vpa-130178	Vicugna pacos	22.22	4.00e-10	60.50
IUUC-Xtr-132699	Xenopus tropicalis	21.77	1.00e-08	55.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence