iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114778

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G186700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g025180	Sb03g025180.1	Sb03g025180.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.50e-61	209.3	105	470
ULD/UDP/UBQ/UBQ_Other	1.90e-10	41.3	17	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefs.....gyeqqDa 92
           Gl NlgNtCYmNS+LQcL+++pel+++ll+ ++ +++ +  ++ + +l+ + ++ f  l +++ + v+p ++l++l+k+ ++f       y+qqDa
   Q: 105  GLYNLGNTCYMNSTLQCLHSVPELKSALLS-YSDTVRGNGIDQASHNLTLATRNTFGDL-DQSVRPVAPLQFLQTLRKKYPQFAqqhnnVYMQQDA 198
           9*****************************.****************************.99999******************9899989****** PP
   S: 93   qEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslq 188
           +E++++l+ +l+++l                        ++  ++   ++++lF++ l s++ c e +++s+++e+ ++l+++++++ +     l+
   Q: 199  EECWTQLVYTLSQTL-----------------------TSDSSESAVLPMKQLFGIDLVSRVHCAESGEESTETESVYSLKCHISQDVNH----LH 267
           ***************.......................2356678889***************************************975....77 PP
   S: 189  dcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts.....peekqke..... 274
           + +++  k+e le+     +++  +    +++ ++++lP++L++++ Rf +++e +++ ki +kv++pleLd+ +fc++           +     
   Q: 268  EGIKHGLKTE-LEK----ASPTLGRTAVYTRESRINELPRYLTVQFVRFFWKRESNQKAKILRKVDYPLELDVYEFCSDelkqkL-----Qaprqm 353
           7776666655.553....67889999999**************************************************555550.....355555 PP
   S: 275  .................................................kkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkee 320
                                                            +  Y+L+av+ H+G s++sGHYv +vk+++gkW++fdD++ +  kee
   Q: 354  lrdaenakfglkahgkassskeneesssagesssmdidkaesslpkkqlTGVYDLVAVLTHKGrSADSGHYVGWVKQDDGKWIEFDDDNPNIRKEE 449
           55555555555555555556666667777788888888888888888889********************************************** PP
   S: 321  evleetg....staYvlfYkr 337
           ++l+ +g    + aY+++Yk 
   Q: 450  DILKLSGggdwHMAYICLYKA 470
           ****988************97 PP

ULD/UDP/UBQ/UBQ_Other

   S: 16   kvnpsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllek 72
           +++ s +  ++K ++++++g+ppe+q++++kG iL+dd +++ +g+kdg++++++ +
   Q: 17   EIDTSQPPIVFKSQLYTLTGVPPERQKIMVKGGILKDDADWSTLGVKDGQKLMMIGT 73
           56666777789*******************************************976 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MPTVSVKWQK EVFPGIEIDT SQPPIVFKSQ LYTLTGVPPE RQKIMVKGGI LKDDADWSTL 60
GVKDGQKLMM IGTADEIVKA PEKGPVFVED LPEEEQVVAL GHSAGLYNLG NTCYMNSTLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCATAAAACA TGCGCTCTCC CCGTGCGCTC TCGACTCTTC TCATTGCCTT TTTGCCTGTG 60
CTTGCCCCCG TTCCTTTCTC CTCCAGCAAG TAAACCCCGT TTCCGCAGCG TCACGCACCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS50053--UBIQUITIN_2
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00240--ubiquitin
PF00443--UCH

SMART

SM00213--UBQ

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_03g025180

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000893	Aegilops tauschii	67.30	1.00e-104	372.00
IUUC-Aml-002053	Ailuropoda melanoleuca	43.18	2.00e-110	392.00
IUUC-Atr-002725	Amborella trichopoda	70.46	0.00e+00	666.00
IUUC-Apl-004031	Anas platyrhynchos	43.56	1.00e-110	392.00
IUUC-Aca-004361	Anolis carolinensis	41.94	2.00e-110	391.00
IUUC-Aly-006078	Arabidopsis lyrata	68.48	0.00e+00	649.00
IUUC-Ath-007658	Arabidopsis thaliana	68.34	0.00e+00	648.00
IUUC-Ago-007796	Ashbya gossypii	33.13	7.00e-63	233.00
IUUC-Acl-008258	Aspergillus clavatus	43.67	5.00e-72	264.00
IUUC-Afl-008732	Aspergillus flavus	38.70	7.00e-82	297.00
IUUC-Afu-008755	Aspergillus fumigatus	45.31	5.00e-73	267.00
IUUC-Ani-009148	Aspergillus nidulans	44.35	1.00e-75	276.00
IUUC-Ang-009878	Aspergillus niger	43.90	1.00e-72	266.00
IUUC-Aor-010239	Aspergillus oryzae	38.70	6.00e-82	297.00
IUUC-Ate-010243	Aspergillus terreus	38.67	1.00e-82	300.00
IUUC-Ame-011327	Astyanax mexicanus	61.11	4.00e-24	105.00
IUUC-Bgr-012231	Blumeria graminis	34.31	7.00e-73	267.00
IUUC-Bta-012553	Bos taurus	44.24	2.00e-112	398.00
IUUC-Bci-013606	Botrytis cinerea	38.53	5.00e-84	304.00
IUUC-Bdi-014567	Brachypodium distachyon	90.45	0.00e+00	852.00
IUUC-Bol-015565	Brassica oleracea	68.83	0.00e+00	654.00
IUUC-Bra-017297	Brassica rapa	68.12	0.00e+00	649.00
IUUC-Cel-018140	Caenorhabditis elegans	38.43	2.00e-81	295.00
IUUC-Cja-019516	Callithrix jacchus	42.77	2.00e-109	388.00
IUUC-Cfa-020808	Canis familiaris	44.65	7.00e-114	403.00
IUUC-Cpo-021688	Cavia porcellus	44.08	8.00e-112	396.00
IUUC-Cre-022663	Chlamydomonas reinhardtii	45.24	8.00e-106	376.00
IUUC-Csa-023429	Chlorocebus sabaeus	42.83	2.00e-110	391.00
IUUC-Cho-024347	Choloepus hoffmanni	44.04	1.00e-111	395.00
IUUC-Cin-025198	Ciona intestinalis	39.92	2.00e-88	318.00
IUUC-Csv-026007	Ciona savignyi	38.83	4.00e-89	320.00
IUUC-Cgl-026757	Colletotrichum gloeosporioides	45.11	2.00e-70	258.00
IUUC-Cne-026963	Cryptococcus neoformans	37.91	3.00e-79	288.00
IUUC-Cme-027240	Cyanidioschyzon merolae	36.96	3.00e-70	258.00
IUUC-Dre-027647	Danio rerio	42.66	2.00e-111	395.00
IUUC-Dno-029967	Dasypus novemcinctus	42.83	3.00e-109	387.00
IUUC-Dor-030886	Dipodomys ordii	36.59	3.00e-75	275.00
IUUC-Dse-031466	Dothistroma septosporum	39.84	1.00e-64	239.00
IUUC-Dme-032079	Drosophila melanogaster	39.14	6.00e-94	337.00
IUUC-Ete-032351	Echinops telfairi	41.93	1.00e-102	365.00
IUUC-Eca-033461	Equus caballus	44.60	3.00e-115	407.00
IUUC-Eeu-035220	Erinaceus europaeus	34.32	1.00e-48	186.00
IUUC-Fca-036210	Felis catus	44.44	1.00e-113	402.00
IUUC-Fal-037528	Ficedula albicollis	42.94	1.00e-109	389.00
IUUC-Fox-037805	Fusarium oxysporum	44.99	6.00e-78	284.00
IUUC-Fso-038177	Fusarium solani	45.98	8.00e-77	280.00
IUUC-Gmo-038953	Gadus morhua	41.85	6.00e-104	370.00
IUUC-Ggr-039972	Gaeumannomyces graminis	42.70	6.00e-69	254.00
IUUC-Gga-040462	Gallus gallus	43.61	8.00e-111	393.00
IUUC-Gac-041312	Gasterosteus aculeatus	42.05	1.00e-107	382.00
IUUC-Gma-043255	Glycine max	72.18	0.00e+00	692.00
IUUC-Ggo-045458	Gorilla gorilla	39.19	4.00e-86	311.00
IUUC-Hsa-045706	Homo sapiens	42.83	3.00e-110	390.00
IUUC-Hvu-047821	Hordeum vulgare	86.97	2.00e-125	440.00
IUUC-Itr-048654	Ictidomys tridecemlineatus	42.42	5.00e-111	393.00
IUUC-Lch-050464	Latimeria chalumnae	41.89	1.00e-108	385.00
IUUC-Lpe-051419	Leersia perrieri	86.65	0.00e+00	798.00
IUUC-Loc-052732	Lepisosteus oculatus	42.14	5.00e-112	397.00
IUUC-Lma-053177	Leptosphaeria maculans	41.67	1.00e-72	266.00
IUUC-Laf-053822	Loxodonta africana	44.40	3.00e-113	401.00
IUUC-Mcc-055893	Macaca mulatta	42.83	3.00e-110	391.00
IUUC-Meu-056307	Macropus eugenii	40.41	9.00e-103	366.00
IUUC-Mor-057171	Magnaporthe oryzae	42.30	7.00e-69	253.00
IUUC-Mpo-057415	Magnaporthe poae	44.82	6.00e-73	267.00
IUUC-Mtr-057901	Medicago truncatula	72.36	0.00e+00	680.00
IUUC-Mla-058897	Melampsora laricipopulina	35.77	6.00e-79	287.00
IUUC-Mga-060016	Meleagris gallopavo	43.15	2.00e-109	388.00
IUUC-Mvi-060562	Microbotryum violaceum	37.18	3.00e-59	222.00
IUUC-Mmr-060624	Microcebus murinus	44.04	4.00e-115	407.00
IUUC-Mdo-061809	Monodelphis domestica	42.86	6.00e-110	390.00
IUUC-Mmu-063869	Mus musculus	43.64	5.00e-111	394.00
IUUC-Mac-064876	Musa acuminata	73.64	0.00e+00	686.00
IUUC-Mpu-066480	Mustela putorius furo	44.65	7.00e-114	403.00
IUUC-Mlu-067866	Myotis lucifugus	44.40	4.00e-113	400.00
IUUC-Nfi-068393	Neosartorya fischeri	46.67	2.00e-13	69.70
IUUC-Ncr-068815	Neurospora crassa	43.78	4.00e-72	265.00
IUUC-Nle-070121	Nomascus leucogenys	47.09	1.00e-58	218.00
IUUC-Opr-070712	Ochotona princeps	33.18	1.00e-55	210.00
IUUC-Ont-071544	Oreochromis niloticus	43.12	4.00e-103	367.00
IUUC-Oan-073635	Ornithorhynchus anatinus	40.94	6.00e-83	300.00
IUUC-Ocu-074926	Oryctolagus cuniculus	42.71	5.00e-110	390.00
IUUC-Oba-075633	Oryza barthii	85.81	0.00e+00	795.00
IUUC-Obr-076423	Oryza brachyantha	90.70	0.00e+00	834.00
IUUC-Ogl-077913	Oryza glaberrima	90.70	0.00e+00	833.00
IUUC-Ogu-078435	Oryza glumaepatula	85.81	0.00e+00	795.00
IUUC-Oin-080072	Oryza indica	85.38	0.00e+00	790.00
IUUC-Olo-080535	Oryza longistaminata	78.87	0.00e+00	712.00
IUUC-Ome-081309	Oryza meridionalis	85.81	0.00e+00	795.00
IUUC-Oni-083113	Oryza nivara	85.81	0.00e+00	795.00
IUUC-Opu-083168	Oryza punctata	83.26	0.00e+00	760.00
IUUC-Oru-084253	Oryza rufipogon	85.81	0.00e+00	795.00
IUUC-Osa-085554	Oryza sativa	90.49	0.00e+00	832.00
IUUC-Ola-086998	Oryzias latipes	42.68	2.00e-105	375.00
IUUC-Olu-087818	Ostreococcus lucimarinus	44.05	1.00e-94	339.00
IUUC-Oga-088571	Otolemur garnettii	44.13	8.00e-113	399.00
IUUC-Oar-089526	Ovis aries	44.20	3.00e-112	398.00
IUUC-Ptr-091433	Pan troglodytes	42.83	3.00e-110	391.00
IUUC-Pan-091966	Papio anubis	42.83	2.00e-110	391.00
IUUC-Psi-093458	Pelodiscus sinensis	41.97	4.00e-102	363.00
IUUC-Pma-094343	Petromyzon marinus	42.71	3.00e-58	217.00
IUUC-Pno-095109	Phaeosphaeria nodorum	44.54	7.00e-73	267.00
IUUC-Ppa-095756	Physcomitrella patens	63.60	1.00e-172	598.00
IUUC-Pfo-096514	Poecilia formosa	42.39	4.00e-102	363.00
IUUC-Pab-098477	Pongo abelii	38.14	1.00e-78	285.00
IUUC-Pop-099221	Populus trichocarpa	73.28	0.00e+00	669.00
IUUC-Pca-100791	Procavia capensis	34.46	3.00e-58	218.00
IUUC-Ppe-101812	Prunus persica	72.78	0.00e+00	677.00
IUUC-Pva-102462	Pteropus vampyrus	41.03	4.00e-84	304.00
IUUC-Pgr-103623	Puccinia graminis	44.85	7.00e-74	270.00
IUUC-Ptt-103767	Puccinia triticina	42.95	3.00e-68	251.00
IUUC-Pte-104109	Pyrenophora teres	43.01	5.00e-73	267.00
IUUC-Pyt-104766	Pyrenophora triticirepentis	43.72	1.00e-73	270.00
IUUC-Rno-105351	Rattus norvegicus	42.42	1.00e-108	385.00
IUUC-Sce-106168	Saccharomyces cerevisiae	33.67	7.00e-65	240.00
IUUC-Sha-107491	Sarcophilus harrisii	43.75	4.00e-111	394.00
IUUC-Sja-107769	Schizosaccharomyces japonicus	35.93	2.00e-78	285.00
IUUC-Spo-108174	Schizosaccharomyces pombe	39.09	2.00e-79	288.00
IUUC-Ssl-108659	Sclerotinia sclerotiorum	43.54	1.00e-72	266.00
IUUC-Smo-108805	Selaginella moellendorffii	66.81	3.00e-180	623.00
IUUC-Sit-110361	Setaria italica	93.31	0.00e+00	888.00
IUUC-Sly-110965	Solanum lycopersicum	71.52	0.00e+00	692.00
IUUC-Sar-113355	Sorex araneus	36.07	4.00e-69	254.00
IUUC-Sre-115011	Sporisorium reilianum	42.27	1.00e-71	263.00
IUUC-Ssc-116273	Sus scrofa	44.20	7.00e-111	393.00
IUUC-Tgu-117063	Taeniopygia guttata	42.36	2.00e-109	389.00
IUUC-Tru-118381	Takifugu rubripes	42.66	1.00e-102	365.00
IUUC-Tsy-119076	Tarsius syrichta	40.37	1.00e-41	163.00
IUUC-Tni-119941	Tetraodon nigroviridis	42.91	5.00e-100	357.00
IUUC-Tca-121246	Theobroma cacao	73.49	0.00e+00	702.00
IUUC-Tre-121969	Trichoderma reesei	43.90	5.00e-69	254.00
IUUC-Tvi-122543	Trichoderma virens	42.01	4.00e-71	261.00
IUUC-Tae-125484	Triticum aestivum	87.95	0.00e+00	813.00
IUUC-Tur-126128	Triticum urartu	65.32	1.00e-101	362.00
IUUC-Tbe-128030	Tupaia belangeri	39.26	3.00e-94	338.00
IUUC-Ttr-128701	Tursiops truncatus	41.51	3.00e-82	298.00
IUUC-Uma-129657	Ustilago maydis	40.69	7.00e-75	273.00
IUUC-Vda-129723	Verticillium dahliae	41.55	4.00e-65	241.00
IUUC-Vpa-130284	Vicugna pacos	30.28	2.00e-35	142.00
IUUC-Vvi-131037	Vitis vinifera	73.05	0.00e+00	706.00
IUUC-Xtr-132235	Xenopus tropicalis	43.55	9.00e-111	392.00
IUUC-Xma-133840	Xiphophorus maculatus	42.60	6.00e-107	380.00
IUUC-Yli-134453	Yarrowia lipolytica	38.73	4.00e-84	304.00
IUUC-Zma-135669	Zea mays	75.41	0.00e+00	774.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence