iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113833

UUCD1 version

UUC-SoB-01724

Ensembl Protein ID

Sb08g014950.1

UniProt Accession

A0A1B6PCR6; A0A1B6PCR6_SORBI

Genbank Protein ID

KXG23461.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000767

Gene Name

SORBI_008G0983002

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb08g014950	Sb08g014950.1	Sb08g014950.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	7.20e-70	236.6	25	302

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEfla 97
           Gl+Nlg+tCY NS+LQcL++  ++r  +++ + e l+       k ++l++l +lf++l +sk   ++   ++kal+      ++  qqD++Efl+
   Q: 25   GLTNLGATCYANSILQCLYMNISFRTGIFSLELEVLK-------KHPVLDQLSRLFAQLHSSKMAFIDSAPFIKALEL-----DNGVQQDSHEFLT 108
           9*****************************5555444.......569*****************************95.....5567********* PP
   S: 98   flldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvs...sreepfldlslpvpgkeetkkeslqdc 190
            +l+ le++l                       + +k    ++++++lF g++++ ++c +c++ s   s+ e+f++l+l+++g +     +l+++
   Q: 109  LFLSLLEQSL-----------------------SHSKVPGARTIVQHLFCGRVSHVTRCSSCGKDSaasSKMEDFYELELNIKGLN-----TLEES 176
           **********.......................457889999*********************98877799***************.....9**** PP
   S: 191  LesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvH 286
           L+++++ee l+gen+y+ce+c+k+++a++ +kl++lP+v  ++LkR+ f  ++  ++ki++ ++fp++Ldl + +++p++    +++Y+L a++vH
   Q: 177  LNDYFSEEALDGENQYFCESCQKRVDATRCIKLRSLPPVVNFQLKRYVFLPKTTTKKKISSTFSFPRQLDLGKRLSNPSS----SCTYDLAAILVH 268
           ****************************************************************************9886....68********** PP
   S: 287  sG.slssGHYvayvknekgk.WllfdDskVtevk 318
           +G +++sGHYva++k+e+++ W++fdD++V+++ 
   Q: 269  KGtGANSGHYVAHIKDESNGqWWEFDDETVSKLG 302
           ****************65555*********9875 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MQEIIRALGS NPSRDLRDST DTPAGLTNLG ATCYANSILQ CLYMNISFRT GIFSLELEVL 60
KKHPVLDQLS RLFAQLHSSK MAFIDSAPFI KALELDNGVQ QDSHEFLTLF LSLLEQSLSH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAGGAAA TTATCCGCGC TCTTGGCTCT AATCCATCCA GGGACCTCCG TGATTCCACT 60
GATACGCCTG CTGGATTGAC TAACCTGGGT GCAACCTGTT ATGCAAATAG CATACTTCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR033841--USP48
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000130	Aegilops tauschii	82.58	6.00e-131	461.00
IUUC-Aml-001357	Ailuropoda melanoleuca	42.14	1.00e-68	254.00
IUUC-Atr-002976	Amborella trichopoda	73.93	3.00e-126	445.00
IUUC-Apl-003773	Anas platyrhynchos	43.34	4.00e-68	252.00
IUUC-Aca-004466	Anolis carolinensis	43.24	2.00e-69	255.00
IUUC-Aly-006249	Arabidopsis lyrata	65.35	3.00e-106	379.00
IUUC-Ath-006700	Arabidopsis thaliana	70.07	2.00e-121	429.00
IUUC-Ame-011554	Astyanax mexicanus	43.67	1.00e-71	264.00
IUUC-Bta-012573	Bos taurus	42.14	1.00e-68	254.00
IUUC-Bdi-014149	Brachypodium distachyon	84.84	7.00e-144	504.00
IUUC-Bol-016289	Brassica oleracea	68.42	1.00e-114	406.00
IUUC-Bra-017494	Brassica rapa	68.42	4.00e-121	428.00
IUUC-Cel-018662	Caenorhabditis elegans	31.60	5.00e-32	132.00
IUUC-Cja-019991	Callithrix jacchus	42.14	2.00e-68	253.00
IUUC-Cfa-020294	Canis familiaris	42.14	1.00e-68	254.00
IUUC-Cpo-021706	Cavia porcellus	39.80	7.00e-66	244.00
IUUC-Cre-022636	Chlamydomonas reinhardtii	42.95	9.00e-59	222.00
IUUC-Csa-023931	Chlorocebus sabaeus	42.14	1.00e-68	254.00
IUUC-Cin-025307	Ciona intestinalis	40.49	3.00e-40	157.00
IUUC-Csv-026006	Ciona savignyi	40.07	3.00e-55	209.00
IUUC-Cne-027065	Cryptococcus neoformans	36.77	1.00e-49	191.00
IUUC-Dre-027624	Danio rerio	43.67	1.00e-72	267.00
IUUC-Dno-029633	Dasypus novemcinctus	45.57	9.00e-61	227.00
IUUC-Dor-030809	Dipodomys ordii	42.04	3.00e-51	196.00
IUUC-Ete-032818	Echinops telfairi	39.13	4.00e-58	219.00
IUUC-Eca-033692	Equus caballus	42.14	1.00e-68	254.00
IUUC-Eeu-035185	Erinaceus europaeus	34.29	2.00e-35	144.00
IUUC-Fca-035676	Felis catus	42.47	1.00e-68	254.00
IUUC-Fal-036913	Ficedula albicollis	42.86	2.00e-68	253.00
IUUC-Gmo-038532	Gadus morhua	44.55	4.00e-70	259.00
IUUC-Gga-041041	Gallus gallus	43.10	3.00e-68	253.00
IUUC-Gac-042570	Gasterosteus aculeatus	44.74	2.00e-73	270.00
IUUC-Gma-044176	Glycine max	71.57	2.00e-124	439.00
IUUC-Ggo-045367	Gorilla gorilla	41.01	4.00e-65	242.00
IUUC-Hsa-046019	Homo sapiens	42.14	1.00e-68	254.00
IUUC-Hvu-047303	Hordeum vulgare	82.26	8.00e-131	459.00
IUUC-Itr-048319	Ictidomys tridecemlineatus	42.14	2.00e-68	253.00
IUUC-Lch-049989	Latimeria chalumnae	44.07	6.00e-72	265.00
IUUC-Lpe-051612	Leersia perrieri	86.77	3.00e-140	492.00
IUUC-Loc-052756	Lepisosteus oculatus	43.00	9.00e-71	261.00
IUUC-Laf-054043	Loxodonta africana	41.81	3.00e-68	253.00
IUUC-Mcc-054986	Macaca mulatta	42.14	1.00e-68	254.00
IUUC-Meu-056228	Macropus eugenii	41.14	2.00e-65	243.00
IUUC-Mtr-058762	Medicago truncatula	71.24	1.00e-121	430.00
IUUC-Mga-059896	Meleagris gallopavo	41.95	1.00e-66	247.00
IUUC-Mvi-060269	Microbotryum violaceum	38.39	4.00e-56	213.00
IUUC-Mmr-060887	Microcebus murinus	42.14	1.00e-68	254.00
IUUC-Mdo-062506	Monodelphis domestica	41.81	4.00e-68	252.00
IUUC-Mmu-063642	Mus musculus	41.47	6.00e-68	251.00
IUUC-Mac-064896	Musa acuminata	80.07	4.00e-132	465.00
IUUC-Mpu-066194	Mustela putorius furo	42.14	1.00e-68	254.00
IUUC-Mlu-067233	Myotis lucifugus	42.19	2.00e-68	253.00
IUUC-Nle-069052	Nomascus leucogenys	42.14	1.00e-68	254.00
IUUC-Opr-070890	Ochotona princeps	41.67	1.00e-64	240.00
IUUC-Ont-071450	Oreochromis niloticus	45.51	6.00e-75	275.00
IUUC-Ocu-073796	Oryctolagus cuniculus	45.57	4.00e-61	229.00
IUUC-Oba-075563	Oryza barthii	87.10	2.00e-148	519.00
IUUC-Obr-076394	Oryza brachyantha	86.45	3.00e-147	515.00
IUUC-Ogl-077339	Oryza glaberrima	90.31	5.00e-108	383.00
IUUC-Ogu-079007	Oryza glumaepatula	87.42	2.00e-149	522.00
IUUC-Oin-079997	Oryza indica	87.42	3.00e-149	522.00
IUUC-Olo-080364	Oryza longistaminata	87.10	1.00e-148	520.00
IUUC-Ome-081165	Oryza meridionalis	87.42	1.00e-149	523.00
IUUC-Oni-083026	Oryza nivara	87.42	2.00e-149	522.00
IUUC-Opu-083284	Oryza punctata	87.10	1.00e-148	520.00
IUUC-Oru-084797	Oryza rufipogon	87.42	2.00e-149	522.00
IUUC-Osa-086221	Oryza sativa	90.31	5.00e-108	383.00
IUUC-Ola-086568	Oryzias latipes	44.59	1.00e-71	264.00
IUUC-Oga-088687	Otolemur garnettii	42.14	2.00e-68	253.00
IUUC-Oar-090345	Ovis aries	42.33	4.00e-69	255.00
IUUC-Ptr-090734	Pan troglodytes	42.14	1.00e-68	254.00
IUUC-Pan-091704	Papio anubis	42.14	1.00e-68	254.00
IUUC-Psi-092937	Pelodiscus sinensis	45.57	2.00e-60	226.00
IUUC-Ppa-095808	Physcomitrella patens	60.19	2.00e-92	333.00
IUUC-Pab-098129	Pongo abelii	42.14	1.00e-68	254.00
IUUC-Pop-099738	Populus trichocarpa	69.28	5.00e-118	418.00
IUUC-Pca-100647	Procavia capensis	41.70	2.00e-51	197.00
IUUC-Ppe-102091	Prunus persica	74.34	4.00e-125	441.00
IUUC-Pva-102719	Pteropus vampyrus	42.14	8.00e-69	254.00
IUUC-Rno-105363	Rattus norvegicus	41.81	4.00e-68	252.00
IUUC-Sha-107620	Sarcophilus harrisii	41.81	7.00e-68	251.00
IUUC-Smo-109579	Selaginella moellendorffii	59.75	5.00e-101	361.00
IUUC-Sit-110683	Setaria italica	91.37	3.00e-151	528.00
IUUC-Sly-111377	Solanum lycopersicum	71.05	7.00e-121	427.00
IUUC-Stu-111969	Solanum tuberosum	70.72	4.00e-126	444.00
IUUC-Sar-113099	Sorex araneus	45.99	2.00e-61	230.00
IUUC-Tgu-117519	Taeniopygia guttata	39.00	1.00e-58	221.00
IUUC-Tru-117651	Takifugu rubripes	44.12	9.00e-72	264.00
IUUC-Tsy-119201	Tarsius syrichta	37.25	1.00e-56	214.00
IUUC-Tni-120840	Tetraodon nigroviridis	44.41	9.00e-74	271.00
IUUC-Tca-121674	Theobroma cacao	74.18	4.00e-133	468.00
IUUC-Tae-125814	Triticum aestivum	82.58	5.00e-131	461.00
IUUC-Tur-126599	Triticum urartu	81.94	1.00e-129	456.00
IUUC-Ttr-128312	Tursiops truncatus	40.13	1.00e-63	237.00
IUUC-Vpa-130348	Vicugna pacos	41.14	2.00e-65	243.00
IUUC-Vvi-131353	Vitis vinifera	72.96	2.00e-122	432.00
IUUC-Xtr-132172	Xenopus tropicalis	40.00	2.00e-46	180.00
IUUC-Xma-133263	Xiphophorus maculatus	44.44	2.00e-63	236.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence