iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-116255

Ensembl Protein ID

ENSSSCP00000020668.1

UniProt Accession

I3L9F6; I3L9F6_PIG

Protein Name

Uncharacterized protein

Gene Name

TRIM52

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000029597.1	ENSSSCT00000032260.1	ENSSSCP00000019761.1
ENSSSCG00000029597.1	ENSSSCT00000026696.1	ENSSSCP00000020668.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.60e-09	36.2	20	48

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkw 29
           CaiCl+ fkd p++ +CgH f++ C+ q w
   Q: 20   CAICLDYFKD-PVSIGCGHNFCRGCVtQLW 48
           **********.**************98989 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MAGCAATPSP MQTLQEEAVC AICLDYFKDP VSIGCGHNFC RGCVTQLWGK EDEQDRDEEE 60
DEWEEDDEAV GAIGGWDNSI RQVLYQGNAD EELFQDQEDD ELWVGDAGVR NWDNMDYVWD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGTGGTCCTC CATCACTTCA GCCCGTCCCC TCAAGTCTAT GAGTTAGCGC GCCTACGTCA 60
TTTTCGATCG CCTCGGACGG GGTGAGGAGT GCCGGCTTCT GAGGAGGAAG CAGCAGGGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding
GO:0051092--P:positive regulation of NF-kappaB transcription factor activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bta-013348	Bos taurus	73.63	3.00e-95	341.00
IUUC-Cfa-020624	Canis familiaris	72.51	1.00e-108	385.00
IUUC-Csa-023996	Chlorocebus sabaeus	73.90	3.00e-91	327.00
IUUC-Dno-029560	Dasypus novemcinctus	75.84	1.00e-101	362.00
IUUC-Eeu-035330	Erinaceus europaeus	57.53	1.00e-33	136.00
IUUC-Fca-035760	Felis catus	73.06	7.00e-97	346.00
IUUC-Ggo-044507	Gorilla gorilla	71.77	2.00e-91	328.00
IUUC-Hsa-046579	Homo sapiens	71.62	3.00e-94	337.00
IUUC-Mcc-055238	Macaca mulatta	72.20	2.00e-100	358.00
IUUC-Oar-090240	Ovis aries	81.41	3.00e-102	363.00
IUUC-Ptr-090708	Pan troglodytes	71.67	4.00e-92	330.00
IUUC-Pan-092603	Papio anubis	77.57	1.00e-101	362.00
IUUC-Pab-097933	Pongo abelii	75.09	1.00e-91	329.00
IUUC-Ttr-128855	Tursiops truncatus	66.67	3.00e-68	251.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence