iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ont-071248

Ensembl Protein ID

ENSONIP00000011889.1

UniProt Accession

I3JSP4; I3JSP4_ORENI

Genbank Protein ID

ENSONIP00000011889

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AERX01008301

Gene Name

rab40c

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000009462.1	ENSONIT00000011898.1	ENSONIP00000011889.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	1.30e-16	60.6	180	227

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box

   S: 1    lsklwllrseprSLqhLCRlaIrrclgsqrlkaidkLPLPksLkdYLlyedy 52
           ++k+w ++++++SLq+LC++aI++c++ + +   dkLPLP ++k++L+++++
   Q: 180  MEKFW-RPNRVFSLQDLCCRAIVSCTPVHLI---DKLPLPVAIKSHLKSFSM 227
           67899.**********************888...***************976 PP

Organism

Oreochromis niloticus

Protein Sequence
(Fasta)

MGSQGSPVKS YDYLLKFLLV GDSDVGKGEI LDSLQDGSAE SPYAYSSGID YKTTTILLDG 60
RRVKLELWDT SGQGRFCTIF RSYSRGAQGI LLVYDITNRW SFDGIDRWIR EIDEHAPGVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCACTCTTTA ACCTAATTTC GTTCATATTC ATTTTCTTAT TTATTCTTCA TACTGCCATC 60
TACACACGGA AAAGAACACA GAAGTATACC ATTTATGCTT ATATTTATTT CTCATCCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027417--P-loop_NTPase
IPR005225--Small_GTP-bd_dom
IPR001806--Small_GTPase
IPR001496--SOCS_box

PROSITE

PS50225--SOCS

Pfam

PF00071--Ras
PF07525--SOCS_box

SMART

SM00253--SOCS
SM00969--SOCS_box

Gene Ontology

GO:0005622--C:intracellular
GO:0005525--F:GTP binding
GO:0016567--P:protein ubiquitination
GO:0007264--P:small GTPase mediated signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001616	Ailuropoda melanoleuca	92.19	1.00e-139	489.00
IUUC-Apl-003799	Anas platyrhynchos	89.71	7.00e-129	452.00
IUUC-Ame-011203	Astyanax mexicanus	98.57	2.00e-164	570.00
IUUC-Bta-013490	Bos taurus	92.88	3.00e-146	510.00
IUUC-Cja-019990	Callithrix jacchus	92.91	7.00e-145	506.00
IUUC-Cpo-022437	Cavia porcellus	91.91	6.00e-138	483.00
IUUC-Csa-024147	Chlorocebus sabaeus	93.24	2.00e-146	511.00
IUUC-Cho-024716	Choloepus hoffmanni	75.76	2.00e-75	274.00
IUUC-Dre-027427	Danio rerio	98.92	2.00e-166	577.00
IUUC-Dno-029998	Dasypus novemcinctus	89.41	1.00e-113	404.00
IUUC-Dor-030584	Dipodomys ordii	82.83	4.00e-106	377.00
IUUC-Dme-031810	Drosophila melanogaster	63.49	1.00e-94	339.00
IUUC-Ete-033080	Echinops telfairi	91.46	3.00e-138	484.00
IUUC-Eca-033423	Equus caballus	92.77	2.00e-123	434.00
IUUC-Eeu-034590	Erinaceus europaeus	86.21	1.00e-109	388.00
IUUC-Fca-035697	Felis catus	93.16	2.00e-120	424.00
IUUC-Fal-037070	Ficedula albicollis	91.46	3.00e-145	507.00
IUUC-Gmo-039605	Gadus morhua	96.42	2.00e-162	564.00
IUUC-Gga-040343	Gallus gallus	91.46	3.00e-145	507.00
IUUC-Ggo-045131	Gorilla gorilla	85.77	4.00e-129	453.00
IUUC-Hsa-046237	Homo sapiens	93.24	2.00e-146	511.00
IUUC-Itr-048902	Ictidomys tridecemlineatus	92.17	3.00e-146	510.00
IUUC-Lch-050193	Latimeria chalumnae	95.34	1.00e-160	558.00
IUUC-Loc-052243	Lepisosteus oculatus	98.57	7.00e-166	575.00
IUUC-Laf-054435	Loxodonta africana	91.10	6.00e-145	506.00
IUUC-Mcc-055337	Macaca mulatta	92.88	3.00e-145	507.00
IUUC-Meu-056731	Macropus eugenii	89.82	4.00e-77	281.00
IUUC-Mmr-061380	Microcebus murinus	92.47	5.00e-145	506.00
IUUC-Mdo-062438	Monodelphis domestica	91.46	3.00e-145	507.00
IUUC-Mmu-064046	Mus musculus	92.53	3.00e-146	510.00
IUUC-Mpu-066029	Mustela putorius furo	91.56	5.00e-123	433.00
IUUC-Mlu-067741	Myotis lucifugus	92.53	1.00e-145	508.00
IUUC-Nle-069240	Nomascus leucogenys	87.19	2.00e-133	468.00
IUUC-Oan-073432	Ornithorhynchus anatinus	91.91	7.00e-119	419.00
IUUC-Ola-086486	Oryzias latipes	89.16	1.00e-146	512.00
IUUC-Oga-088293	Otolemur garnettii	92.53	3.00e-146	510.00
IUUC-Oar-089702	Ovis aries	76.19	6.00e-110	389.00
IUUC-Ptr-090720	Pan troglodytes	93.24	2.00e-146	511.00
IUUC-Pan-091732	Papio anubis	93.24	2.00e-146	511.00
IUUC-Pma-094679	Petromyzon marinus	78.06	4.00e-111	394.00
IUUC-Pfo-097105	Poecilia formosa	98.92	2.00e-166	578.00
IUUC-Pab-098054	Pongo abelii	93.24	2.00e-146	511.00
IUUC-Pca-100775	Procavia capensis	90.67	2.00e-86	311.00
IUUC-Pva-102658	Pteropus vampyrus	92.17	4.00e-145	506.00
IUUC-Rno-105303	Rattus norvegicus	92.53	3.00e-146	510.00
IUUC-Sha-106536	Sarcophilus harrisii	91.46	3.00e-145	507.00
IUUC-Tgu-116858	Taeniopygia guttata	95.85	3.00e-110	390.00
IUUC-Tru-118264	Takifugu rubripes	81.74	2.00e-153	535.00
IUUC-Tsy-119011	Tarsius syrichta	76.96	8.00e-92	329.00
IUUC-Tni-120350	Tetraodon nigroviridis	98.92	2.00e-166	577.00
IUUC-Ttr-129236	Tursiops truncatus	93.59	2.00e-147	514.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence