iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-113954

Ensembl Protein ID

Sb06g024850.1

UniProt Accession

A0A1B6PMG7; A0A1B6PMG7_SORBI

Genbank Protein ID

KXG26859.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000765

Gene Name

SORBI_006G173200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g024850	Sb06g024850.1	Sb06g024850.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.50e-11	42.5	572	604

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH ++vtcla+ +d ++lv+Gs+D t+ +W+++
   Q: 572  GHIAPVTCLALsPDsNYLVTGSRDTTVILWRIH 604
           899*********999***************976 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSTCPLLSSS PLACPLLSSS PSPTLAVTSK RINFIIDEHS NDSNIDDAAS TSGQCDQQDK 60
DRSWLISSLH QIYSRRYLLR RSALELFMVD RSNFFFDFGD IDARKNAYRA IVHTKPPNLN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCACCT GCCCCCTTCT CTCTTCCTCT CCCCTTGCCT GCCCCCTCCT CTCTTCCTCT 60
CCCTCGCCCA CACTCGCGGT AAAAGCCTCG AGCGGGAGAT TTCGCGCACG AAGAGCAGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR000409--BEACH_dom
IPR013320--ConA-like_dom
IPR031570--DUF4704
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50197--BEACH
PS51783--PH_BEACH
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02138--Beach
PF15787--DUF4704
PF14844--PH_BEACH
PF00400--WD40

SMART

SM01026--Beach
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000509	Aegilops tauschii	81.55	0.00e+00	1363.00
IUUC-Aml-001205	Ailuropoda melanoleuca	37.41	5.00e-131	462.00
IUUC-Atr-002854	Amborella trichopoda	66.63	0.00e+00	1176.00
IUUC-Apl-004130	Anas platyrhynchos	36.62	8.00e-131	462.00
IUUC-Aca-005335	Anolis carolinensis	38.59	9.00e-138	485.00
IUUC-Aly-006298	Arabidopsis lyrata	66.98	0.00e+00	1119.00
IUUC-Ath-006607	Arabidopsis thaliana	66.90	0.00e+00	1105.00
IUUC-Ame-010605	Astyanax mexicanus	40.37	1.00e-133	471.00
IUUC-Bta-013018	Bos taurus	37.16	1.00e-128	455.00
IUUC-Bdi-014211	Brachypodium distachyon	85.35	0.00e+00	1397.00
IUUC-Bol-016214	Brassica oleracea	66.71	0.00e+00	1111.00
IUUC-Bra-017047	Brassica rapa	67.13	0.00e+00	1126.00
IUUC-Cja-018744	Callithrix jacchus	39.20	2.00e-133	469.00
IUUC-Cfa-020786	Canis familiaris	38.24	3.00e-133	470.00
IUUC-Cpo-021636	Cavia porcellus	37.89	2.00e-130	461.00
IUUC-Csa-023251	Chlorocebus sabaeus	36.82	7.00e-128	452.00
IUUC-Cho-024721	Choloepus hoffmanni	52.58	2.00e-98	353.00
IUUC-Csv-026337	Ciona savignyi	34.41	1.00e-110	393.00
IUUC-Dre-028627	Danio rerio	41.59	7.00e-138	485.00
IUUC-Dno-029573	Dasypus novemcinctus	37.36	4.00e-129	456.00
IUUC-Dme-031593	Drosophila melanogaster	37.54	2.00e-125	444.00
IUUC-Ete-032803	Echinops telfairi	49.18	8.00e-104	371.00
IUUC-Eca-033893	Equus caballus	38.02	4.00e-133	469.00
IUUC-Fca-036558	Felis catus	37.20	6.00e-125	442.00
IUUC-Fal-037533	Ficedula albicollis	38.30	4.00e-134	473.00
IUUC-Gmo-039339	Gadus morhua	38.01	1.00e-123	438.00
IUUC-Gga-040180	Gallus gallus	38.38	1.00e-132	468.00
IUUC-Gac-041466	Gasterosteus aculeatus	38.15	2.00e-132	467.00
IUUC-Gma-042851	Glycine max	67.18	0.00e+00	1163.00
IUUC-Ggo-045191	Gorilla gorilla	52.15	3.00e-111	396.00
IUUC-Hsa-046316	Homo sapiens	37.01	2.00e-128	454.00
IUUC-Hvu-047804	Hordeum vulgare	78.27	0.00e+00	780.00
IUUC-Itr-048852	Ictidomys tridecemlineatus	38.00	5.00e-132	466.00
IUUC-Lch-049963	Latimeria chalumnae	38.05	3.00e-134	473.00
IUUC-Lpe-051515	Leersia perrieri	85.40	0.00e+00	1365.00
IUUC-Loc-052386	Lepisosteus oculatus	39.15	5.00e-139	489.00
IUUC-Laf-053724	Loxodonta africana	38.31	6.00e-133	469.00
IUUC-Mcc-055200	Macaca mulatta	39.75	1.00e-133	469.00
IUUC-Meu-056286	Macropus eugenii	37.10	4.00e-129	456.00
IUUC-Mtr-057650	Medicago truncatula	65.60	0.00e+00	1102.00
IUUC-Mga-059907	Meleagris gallopavo	37.43	6.00e-131	462.00
IUUC-Mmr-061112	Microcebus murinus	37.86	6.00e-132	466.00
IUUC-Mdo-062727	Monodelphis domestica	37.86	2.00e-133	470.00
IUUC-Mmu-063641	Mus musculus	35.93	2.00e-129	457.00
IUUC-Mac-065578	Musa acuminata	72.40	0.00e+00	1316.00
IUUC-Mpu-066823	Mustela putorius furo	37.28	3.00e-131	463.00
IUUC-Mlu-067308	Myotis lucifugus	38.79	1.00e-132	468.00
IUUC-Nle-069582	Nomascus leucogenys	36.06	1.00e-126	448.00
IUUC-Opr-070275	Ochotona princeps	47.30	5.00e-110	392.00
IUUC-Ont-072584	Oreochromis niloticus	37.30	8.00e-121	429.00
IUUC-Oan-073413	Ornithorhynchus anatinus	38.20	2.00e-129	455.00
IUUC-Ocu-074036	Oryctolagus cuniculus	37.64	2.00e-130	459.00
IUUC-Oba-075324	Oryza barthii	86.13	0.00e+00	1465.00
IUUC-Obr-076283	Oryza brachyantha	85.58	0.00e+00	1464.00
IUUC-Ogl-077738	Oryza glaberrima	70.20	0.00e+00	1157.00
IUUC-Ogu-078046	Oryza glumaepatula	85.90	0.00e+00	1454.00
IUUC-Oin-079301	Oryza indica	87.43	0.00e+00	1463.00
IUUC-Olo-080322	Oryza longistaminata	81.76	0.00e+00	1368.00
IUUC-Ome-081680	Oryza meridionalis	86.13	0.00e+00	1461.00
IUUC-Oni-082114	Oryza nivara	86.13	0.00e+00	1431.00
IUUC-Opu-083624	Oryza punctata	85.61	0.00e+00	1475.00
IUUC-Oru-084853	Oryza rufipogon	86.02	0.00e+00	1465.00
IUUC-Osa-085878	Oryza sativa	82.11	0.00e+00	728.00
IUUC-Ola-086673	Oryzias latipes	39.09	2.00e-130	461.00
IUUC-Oga-088409	Otolemur garnettii	37.87	2.00e-132	466.00
IUUC-Oar-090283	Ovis aries	37.30	1.00e-129	458.00
IUUC-Ptr-091015	Pan troglodytes	37.55	6.00e-129	456.00
IUUC-Psi-093570	Pelodiscus sinensis	36.69	2.00e-129	457.00
IUUC-Pfo-096377	Poecilia formosa	37.10	4.00e-130	459.00
IUUC-Pab-098101	Pongo abelii	36.06	7.00e-126	445.00
IUUC-Pop-099812	Populus trichocarpa	67.13	0.00e+00	1132.00
IUUC-Pca-100386	Procavia capensis	36.10	7.00e-124	438.00
IUUC-Ppe-102010	Prunus persica	68.26	0.00e+00	1102.00
IUUC-Pva-102558	Pteropus vampyrus	37.22	3.00e-129	456.00
IUUC-Rno-104903	Rattus norvegicus	36.96	1.00e-131	464.00
IUUC-Sha-107387	Sarcophilus harrisii	37.86	9.00e-133	468.00
IUUC-Sit-110476	Setaria italica	92.03	0.00e+00	1540.00
IUUC-Sly-111319	Solanum lycopersicum	67.73	0.00e+00	1167.00
IUUC-Sar-113411	Sorex araneus	51.69	4.00e-109	389.00
IUUC-Tgu-117304	Taeniopygia guttata	37.39	1.00e-129	458.00
IUUC-Tru-118404	Takifugu rubripes	39.88	7.00e-135	475.00
IUUC-Tsy-119218	Tarsius syrichta	48.85	6.00e-108	385.00
IUUC-Tni-120641	Tetraodon nigroviridis	39.88	3.00e-134	473.00
IUUC-Tca-121575	Theobroma cacao	67.72	0.00e+00	1133.00
IUUC-Tae-123719	Triticum aestivum	84.06	0.00e+00	1446.00
IUUC-Tur-126576	Triticum urartu	79.98	0.00e+00	1304.00
IUUC-Tbe-127556	Tupaia belangeri	50.45	2.00e-98	353.00
IUUC-Ttr-128452	Tursiops truncatus	38.02	2.00e-132	468.00
IUUC-Vpa-130417	Vicugna pacos	51.21	2.00e-111	396.00
IUUC-Vvi-131542	Vitis vinifera	68.74	0.00e+00	1208.00
IUUC-Xtr-132038	Xenopus tropicalis	36.64	4.00e-125	443.00
IUUC-Xma-133685	Xiphophorus maculatus	40.28	1.00e-132	468.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence