iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111521

Ensembl Protein ID

Solyc03g097160.2.1

UniProt Accession

K4BJD3; K4BJD3_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc03g097160.2	Solyc03g097160.2.1	Solyc03g097160.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.50e-62	203.4	394	431
UBD/Beta-Prp	2.80e-108	362.4	27	296

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf....sd.tllvsGsdDgtikvWDlrtg 33
           gHtd + cl+     s+ tl+v+Gs D+t+++WD  + 
   Q: 394  GHTDVILCLDTclssSGrTLIVTGSKDNTVRLWDCQSK 431
           8*******9755797779****************8665 PP

UBD/Beta-Prp

   S: 18   fspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdk 108
           ++ d+s+l+ ++ d++ik+ d+++ +  ++++g++++vta+ +sp+ +il ++s  r i+vw+lst +c++++kghe  v+ +++++sg  
   Q: 27   VASDESFLVCAC-DEKIKIVDLSNASIKSTIEGDSEAVTALALSPNNNILFSASHSRQIRVWNLSTLECIRSWKGHEGPVMGMASDASGGL 116
           355999999999.****************************************************************************** PP
   S: 109  lvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg..nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvs 197
           lv++++dr + vwd++ g c +  ++gh+gvv+++ +hpd    l++sG++D+ vr+Wdl  +k+l tl++ h+++++s++++++g  l+s
   Q: 117  LVTAGADRKVLVWDVDGGFCTH-YFKGHKGVVTSIMFHPDPnrLLVFSGGDDGSVRVWDLIGKKCLSTLEK-HQSAITSMAISEDGWTLLS 205
           **********************.***************998534678**********************99.******************* PP
   S: 198  gsldgtvklwdlqtgecvrtlnght..................dnvksvrfs....pnderlvsgssDgsiriWdlrsgdllktlqlhnss 266
           +++d+ v+lw+l++  c+ t    +                  +  + +++       +  ++++++ g +riW   s d   +l  ++ss
   Q: 206  AGRDKVVNLWNLHNYGCMTTIPMFEslealciigpespfaaslSSLTYLQTKkrsdVPSINFITVGERGLVRIW---SADRALCLFEQKSS 293
           *************9999666555554555555555555555554444444442111224456788889999999...44444444444433 PP
   S: 267  vis 269
            i+
   Q: 294  DIA 296
           333 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MASVSLKKSY KCMQSLQQFY TGGPYAVASD ESFLVCACDE KIKIVDLSNA SIKSTIEGDS 60
EAVTALALSP NNNILFSASH SRQIRVWNLS TLECIRSWKG HEGPVMGMAS DASGGLLVTA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCCCTTTAA CGCTCTTTCA GAGAACTGGC ACATATTGCT TCACAATTTA CATATAGTGT 60
GTGGTGTTGG AGAATTTCGC TGCCCAAATC AAGAGGAAGA AAGACACTAA AATGGCTTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR011047--Quinoprotein_ADH-like_supfam
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0051301--P:cell division
GO:0009793--P:embryo development ending in seed dormancy
GO:0009880--P:embryonic pattern specification
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

sly:101246325

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	57.64	0.00e+00	954.00
IUUC-Aml-002376	Ailuropoda melanoleuca	36.70	8.00e-152	530.00
IUUC-Atr-002486	Amborella trichopoda	64.33	0.00e+00	1109.00
IUUC-Apl-003519	Anas platyrhynchos	32.28	5.00e-114	404.00
IUUC-Aca-004363	Anolis carolinensis	34.68	1.00e-77	282.00
IUUC-Aly-006152	Arabidopsis lyrata	68.68	0.00e+00	1137.00
IUUC-Ath-006966	Arabidopsis thaliana	67.93	0.00e+00	1131.00
IUUC-Ago-007746	Ashbya gossypii	30.01	4.00e-97	348.00
IUUC-Acl-008009	Aspergillus clavatus	27.37	9.00e-100	357.00
IUUC-Afl-008681	Aspergillus flavus	27.18	1.00e-93	337.00
IUUC-Afu-008798	Aspergillus fumigatus	27.22	2.00e-93	336.00
IUUC-Ani-009278	Aspergillus nidulans	28.26	4.00e-109	388.00
IUUC-Ang-009640	Aspergillus niger	29.04	2.00e-107	383.00
IUUC-Aor-010160	Aspergillus oryzae	27.43	1.00e-93	337.00
IUUC-Ate-010320	Aspergillus terreus	28.35	3.00e-105	375.00
IUUC-Ame-010930	Astyanax mexicanus	38.89	7.00e-41	159.00
IUUC-Bgr-012054	Blumeria graminis	29.75	5.00e-99	355.00
IUUC-Bta-012611	Bos taurus	37.73	1.00e-148	520.00
IUUC-Bci-013797	Botrytis cinerea	28.40	1.00e-103	370.00
IUUC-Bdi-014384	Brachypodium distachyon	63.47	0.00e+00	1077.00
IUUC-Bol-016483	Brassica oleracea	66.08	0.00e+00	1149.00
IUUC-Bra-017798	Brassica rapa	68.02	0.00e+00	1131.00
IUUC-Cel-018664	Caenorhabditis elegans	27.26	5.00e-93	335.00
IUUC-Cja-019092	Callithrix jacchus	36.24	4.00e-151	527.00
IUUC-Cfa-021040	Canis familiaris	36.40	2.00e-152	531.00
IUUC-Cpo-022529	Cavia porcellus	36.69	8.00e-147	513.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	62.04	4.00e-53	198.00
IUUC-Csa-024205	Chlorocebus sabaeus	36.40	7.00e-152	530.00
IUUC-Cin-025560	Ciona intestinalis	35.98	1.00e-153	536.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	29.19	2.00e-107	382.00
IUUC-Cne-027082	Cryptococcus neoformans	29.75	8.00e-116	410.00
IUUC-Cme-027159	Cyanidioschyzon merolae	25.60	5.00e-38	152.00
IUUC-Dre-028138	Danio rerio	36.07	3.00e-149	521.00
IUUC-Dno-029914	Dasypus novemcinctus	34.62	4.00e-107	381.00
IUUC-Dor-030685	Dipodomys ordii	37.70	1.00e-95	343.00
IUUC-Dse-031429	Dothistroma septosporum	28.15	8.00e-104	370.00
IUUC-Dme-031995	Drosophila melanogaster	28.49	8.00e-97	347.00
IUUC-Ete-033086	Echinops telfairi	40.36	6.00e-88	318.00
IUUC-Eca-034354	Equus caballus	36.74	2.00e-145	509.00
IUUC-Eeu-034832	Erinaceus europaeus	39.42	4.00e-88	318.00
IUUC-Fca-036136	Felis catus	32.88	1.00e-123	436.00
IUUC-Fal-036859	Ficedula albicollis	36.80	4.00e-155	541.00
IUUC-Fox-037863	Fusarium oxysporum	28.36	8.00e-95	340.00
IUUC-Fso-038389	Fusarium solani	27.90	2.00e-103	369.00
IUUC-Gmo-038711	Gadus morhua	33.13	1.00e-136	479.00
IUUC-Ggr-039820	Gaeumannomyces graminis	28.23	5.00e-97	348.00
IUUC-Gga-040263	Gallus gallus	36.85	2.00e-158	551.00
IUUC-Gac-041291	Gasterosteus aculeatus	35.97	6.00e-161	560.00
IUUC-Gma-044026	Glycine max	65.81	0.00e+00	1172.00
IUUC-Ggo-044693	Gorilla gorilla	36.39	6.00e-155	540.00
IUUC-Hsa-046048	Homo sapiens	36.27	1.00e-154	539.00
IUUC-Hvu-047608	Hordeum vulgare	61.18	0.00e+00	1063.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	37.32	6.00e-159	553.00
IUUC-Kpa-049209	Komagataella pastoris	31.76	6.00e-116	410.00
IUUC-Lch-050085	Latimeria chalumnae	35.39	2.00e-140	492.00
IUUC-Lpe-050945	Leersia perrieri	60.40	0.00e+00	1042.00
IUUC-Loc-052679	Lepisosteus oculatus	36.33	1.00e-173	603.00
IUUC-Laf-053685	Loxodonta africana	36.10	4.00e-140	491.00
IUUC-Mcc-055861	Macaca mulatta	35.66	1.00e-150	526.00
IUUC-Meu-056820	Macropus eugenii	32.94	6.00e-110	390.00
IUUC-Mor-057234	Magnaporthe oryzae	27.97	1.00e-91	330.00
IUUC-Mpo-057456	Magnaporthe poae	28.99	4.00e-75	275.00
IUUC-Mtr-058122	Medicago truncatula	66.78	0.00e+00	1189.00
IUUC-Mla-058980	Melampsora laricipopulina	28.47	2.00e-88	319.00
IUUC-Mga-060080	Meleagris gallopavo	36.15	8.00e-155	540.00
IUUC-Mvi-060338	Microbotryum violaceum	33.85	4.00e-145	508.00
IUUC-Mmr-060762	Microcebus murinus	36.43	5.00e-147	514.00
IUUC-Mdo-061975	Monodelphis domestica	36.49	3.00e-153	535.00
IUUC-Mmu-064038	Mus musculus	37.44	8.00e-152	530.00
IUUC-Mac-065189	Musa acuminata	61.07	0.00e+00	1108.00
IUUC-Mpu-066526	Mustela putorius furo	37.44	1.00e-148	520.00
IUUC-Mlu-067716	Myotis lucifugus	36.69	6.00e-161	560.00
IUUC-Nfi-068474	Neosartorya fischeri	27.66	8.00e-99	354.00
IUUC-Ncr-068826	Neurospora crassa	27.81	1.00e-96	347.00
IUUC-Nle-069832	Nomascus leucogenys	35.90	1.00e-153	536.00
IUUC-Opr-071183	Ochotona princeps	36.83	7.00e-147	513.00
IUUC-Ont-072371	Oreochromis niloticus	36.21	3.00e-164	571.00
IUUC-Oan-073491	Ornithorhynchus anatinus	36.51	2.00e-133	469.00
IUUC-Ocu-074894	Oryctolagus cuniculus	30.43	5.00e-30	125.00
IUUC-Oba-075963	Oryza barthii	61.64	0.00e+00	1067.00
IUUC-Obr-076173	Oryza brachyantha	62.83	0.00e+00	1058.00
IUUC-Ogl-077692	Oryza glaberrima	61.64	0.00e+00	1068.00
IUUC-Ogu-078965	Oryza glumaepatula	61.64	0.00e+00	1067.00
IUUC-Oin-079708	Oryza indica	61.16	0.00e+00	1061.00
IUUC-Olo-080679	Oryza longistaminata	61.52	0.00e+00	1070.00
IUUC-Oni-082960	Oryza nivara	61.28	0.00e+00	1062.00
IUUC-Opu-083282	Oryza punctata	61.09	0.00e+00	1030.00
IUUC-Oru-085224	Oryza rufipogon	61.40	0.00e+00	1064.00
IUUC-Osa-085320	Oryza sativa	61.40	0.00e+00	1064.00
IUUC-Ola-086370	Oryzias latipes	30.43	5.00e-75	275.00
IUUC-Olu-087814	Ostreococcus lucimarinus	35.51	3.00e-125	442.00
IUUC-Oga-088458	Otolemur garnettii	36.94	1.00e-157	549.00
IUUC-Oar-090032	Ovis aries	36.27	3.00e-108	385.00
IUUC-Ptr-090749	Pan troglodytes	36.02	7.00e-154	536.00
IUUC-Pan-091691	Papio anubis	35.40	3.00e-142	498.00
IUUC-Psi-093200	Pelodiscus sinensis	35.64	7.00e-155	540.00
IUUC-Pma-094165	Petromyzon marinus	35.50	1.00e-106	380.00
IUUC-Pno-095048	Phaeosphaeria nodorum	30.04	7.00e-87	314.00
IUUC-Ppa-095336	Physcomitrella patens	54.61	0.00e+00	924.00
IUUC-Pfo-096132	Poecilia formosa	36.78	6.00e-157	547.00
IUUC-Pab-097855	Pongo abelii	36.52	8.00e-154	536.00
IUUC-Pop-099434	Populus trichocarpa	65.02	0.00e+00	1121.00
IUUC-Pca-100232	Procavia capensis	34.35	9.00e-53	201.00
IUUC-Ppe-101665	Prunus persica	65.96	0.00e+00	1181.00
IUUC-Pva-102178	Pteropus vampyrus	37.30	2.00e-152	532.00
IUUC-Pgr-103288	Puccinia graminis	30.48	2.00e-87	317.00
IUUC-Ptt-103808	Puccinia triticina	30.05	6.00e-83	301.00
IUUC-Pte-104205	Pyrenophora teres	29.41	7.00e-108	384.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	27.96	5.00e-95	341.00
IUUC-Rno-105617	Rattus norvegicus	37.48	7.00e-153	533.00
IUUC-Sce-106281	Saccharomyces cerevisiae	30.09	2.00e-104	372.00
IUUC-Sha-107378	Sarcophilus harrisii	36.95	4.00e-149	521.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	32.10	7.00e-118	417.00
IUUC-Spo-108361	Schizosaccharomyces pombe	32.16	8.00e-115	407.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	28.98	1.00e-107	383.00
IUUC-Smo-109257	Selaginella moellendorffii	54.00	0.00e+00	922.00
IUUC-Sit-110258	Setaria italica	62.36	0.00e+00	1095.00
IUUC-Stu-112718	Solanum tuberosum	87.59	6.00e-66	241.00
IUUC-Sar-113586	Sorex araneus	39.60	2.00e-23	102.00
IUUC-Sbi-114768	Sorghum bicolor	61.46	0.00e+00	1077.00
IUUC-Sre-115159	Sporisorium reilianum	32.42	1.00e-93	337.00
IUUC-Ssc-116342	Sus scrofa	30.98	1.00e-74	273.00
IUUC-Tgu-117320	Taeniopygia guttata	35.83	1.00e-142	499.00
IUUC-Tru-118024	Takifugu rubripes	36.43	8.00e-158	550.00
IUUC-Tni-119971	Tetraodon nigroviridis	36.60	2.00e-158	551.00
IUUC-Tca-121248	Theobroma cacao	70.46	0.00e+00	1189.00
IUUC-Tre-122079	Trichoderma reesei	27.14	2.00e-100	359.00
IUUC-Tvi-122554	Trichoderma virens	27.69	9.00e-102	363.00
IUUC-Tae-123690	Triticum aestivum	63.05	0.00e+00	1075.00
IUUC-Tur-126436	Triticum urartu	58.57	0.00e+00	851.00
IUUC-Tme-126942	Tuber melanosporum	32.34	2.00e-113	402.00
IUUC-Tbe-127418	Tupaia belangeri	30.47	6.00e-30	124.00
IUUC-Ttr-128964	Tursiops truncatus	35.57	7.00e-147	513.00
IUUC-Uma-129473	Ustilago maydis	31.44	7.00e-103	368.00
IUUC-Vda-129749	Verticillium dahliae	28.36	1.00e-93	337.00
IUUC-Vpa-130668	Vicugna pacos	30.47	8.00e-30	124.00
IUUC-Vvi-131511	Vitis vinifera	70.51	0.00e+00	1215.00
IUUC-Xtr-132816	Xenopus tropicalis	32.67	8.00e-131	460.00
IUUC-Xma-133672	Xiphophorus maculatus	36.54	6.00e-161	560.00
IUUC-Yli-134602	Yarrowia lipolytica	34.32	3.00e-137	481.00
IUUC-Zma-135559	Zea mays	60.12	0.00e+00	1056.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence