iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tru-118491

Ensembl Protein ID

ENSTRUP00000000751.1

UniProt Accession

H2RKT8; H2RKT8_TAKRU

Protein Name

Uncharacterized protein

Gene Name

gemin5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000000329.1	ENSTRUT00000000754.1	ENSTRUP00000000751.1
ENSTRUG00000000329.1	ENSTRUT00000000755.1	ENSTRUP00000000752.1
ENSTRUG00000000329.1	ENSTRUT00000000756.1	ENSTRUP00000000753.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-34	116.9	632	664
UBD/Beta-Prp	1.10e-59	203.3	40	260

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDl 30
           gHt+++t++a+   +d +lv+ s+Dgt +vWD+
   Q: 632  GHTSKITGMAWsphHDARLVTVSYDGTAQVWDV 664
           8**********97655779*************8 PP

UBD/Beta-Prp

   S: 38   dvttgkl..lrslsgheaevtavkfspdgk...ilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp.sgdklvsGshdrtirv 120
           dv+  ++  + +l gh + v+  +fs+++    i v++s+D+ ++ wd  +++ ++ + +h+  v+++++sp + + +vsG++  ++ +
   Q: 40   DVSASSCrvVGELVGHRDLVSGFSFSHHAGqshICVSSSSDGSLRFWDAAARSLIREYAAHQTAVTAVHWSPvDCNLVVSGDEKGVVVC 128
           55555555599*****************98999***************************************555************** PP
   S: 121  .wdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdl.ktgkllrtltgghtdsvyslsfdsng.............. 192
            w  +tg   + +  ++ +++ c++ +p + + ++ G +D+++ l d+ k g+++++l+g h+d ++sl+++s                
   Q: 129  hW-YHTGDTAS-C-FPEPRSIFCLSCSPHTwSTVAVGYKDGMIVLIDVsKKGEVMHRLRG-HDDEIHSLAWSSVAgedalcsrpedsee 213
           65.55665555.3.45566688888888888****************9999********9.*********8777677888888888999 PP
   S: 193  .....................kelvsgsldgtvklwdlqtgecvrtl 218
                                 +l+sgs+d+tv++w+  +g+ ++tl
   Q: 214  tnakfhhlkvslgssvgggkgCYLASGSKDQTVRVWSTARGKGLMTL 260
           999999999******************************99988887 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

IAMHERSLPA SPNWYCSRCS DLNSDGLLGF GAKNIIYLID VSASSCRVVG ELVGHRDLVS 60
GFSFSHHAGQ SHICVSSSSD GSLRFWDAAA RSLIREYAAH QTAVTAVHWS PVDCNLVVSG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTGCCATGC ACGAAAGATC CCTTCCTGCG TCGCCAAACT GGTACTGCTC GCGTTGCAGT 60
GACCTTAACA GCGATGGTTT GCTGGGATTT GGAGCCAAAA ACATCATTTA TTTGATTGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001199	Ailuropoda melanoleuca	47.89	0.00e+00	1338.00
IUUC-Apl-003586	Anas platyrhynchos	46.50	0.00e+00	1171.00
IUUC-Aca-004956	Anolis carolinensis	46.02	0.00e+00	1337.00
IUUC-Ame-010753	Astyanax mexicanus	69.01	0.00e+00	1063.00
IUUC-Bta-012315	Bos taurus	47.79	0.00e+00	1335.00
IUUC-Cja-019334	Callithrix jacchus	47.19	0.00e+00	1340.00
IUUC-Cfa-021254	Canis familiaris	47.35	0.00e+00	1354.00
IUUC-Cpo-021984	Cavia porcellus	45.60	0.00e+00	1271.00
IUUC-Csa-023650	Chlorocebus sabaeus	47.43	0.00e+00	1336.00
IUUC-Cho-024860	Choloepus hoffmanni	50.71	0.00e+00	1187.00
IUUC-Cin-025778	Ciona intestinalis	38.92	9.00e-148	518.00
IUUC-Csv-026313	Ciona savignyi	38.54	2.00e-153	536.00
IUUC-Dre-028096	Danio rerio	68.46	0.00e+00	1047.00
IUUC-Dno-029799	Dasypus novemcinctus	50.16	0.00e+00	1256.00
IUUC-Dor-030885	Dipodomys ordii	48.35	0.00e+00	708.00
IUUC-Dme-031744	Drosophila melanogaster	31.93	3.00e-12	68.20
IUUC-Ete-032918	Echinops telfairi	45.48	0.00e+00	1254.00
IUUC-Eca-034144	Equus caballus	46.51	0.00e+00	1324.00
IUUC-Eeu-034843	Erinaceus europaeus	44.99	0.00e+00	922.00
IUUC-Fca-035948	Felis catus	47.13	0.00e+00	1328.00
IUUC-Fal-037303	Ficedula albicollis	47.26	0.00e+00	1328.00
IUUC-Gmo-039591	Gadus morhua	57.13	0.00e+00	1234.00
IUUC-Gga-040570	Gallus gallus	45.72	0.00e+00	1149.00
IUUC-Gac-042646	Gasterosteus aculeatus	67.85	0.00e+00	1900.00
IUUC-Ggo-045605	Gorilla gorilla	44.04	0.00e+00	978.00
IUUC-Hsa-046122	Homo sapiens	47.22	0.00e+00	1331.00
IUUC-Itr-048094	Ictidomys tridecemlineatus	50.11	0.00e+00	1268.00
IUUC-Lch-050489	Latimeria chalumnae	42.65	0.00e+00	732.00
IUUC-Loc-052259	Lepisosteus oculatus	51.66	0.00e+00	1427.00
IUUC-Laf-053338	Loxodonta africana	46.79	0.00e+00	1339.00
IUUC-Mcc-055442	Macaca mulatta	47.49	0.00e+00	1342.00
IUUC-Meu-056245	Macropus eugenii	60.67	0.00e+00	651.00
IUUC-Mga-060202	Meleagris gallopavo	46.19	0.00e+00	1208.00
IUUC-Mmr-061730	Microcebus murinus	46.79	0.00e+00	1324.00
IUUC-Mdo-062880	Monodelphis domestica	46.95	0.00e+00	1358.00
IUUC-Mmu-063930	Mus musculus	59.26	0.00e+00	969.00
IUUC-Mpu-066605	Mustela putorius furo	47.59	0.00e+00	1340.00
IUUC-Mlu-067765	Myotis lucifugus	47.24	0.00e+00	1351.00
IUUC-Nle-069183	Nomascus leucogenys	47.52	0.00e+00	1316.00
IUUC-Opr-070659	Ochotona princeps	35.46	3.00e-120	426.00
IUUC-Ont-072356	Oreochromis niloticus	68.00	0.00e+00	1969.00
IUUC-Oan-073056	Ornithorhynchus anatinus	61.66	0.00e+00	928.00
IUUC-Ocu-073881	Oryctolagus cuniculus	47.32	0.00e+00	1373.00
IUUC-Ola-087120	Oryzias latipes	78.05	8.00e-93	332.00
IUUC-Olu-087648	Ostreococcus lucimarinus	25.08	1.00e-29	125.00
IUUC-Oga-088343	Otolemur garnettii	47.42	0.00e+00	1331.00
IUUC-Oar-089257	Ovis aries	47.05	0.00e+00	1352.00
IUUC-Ptr-090497	Pan troglodytes	47.16	0.00e+00	1333.00
IUUC-Pan-092638	Papio anubis	47.73	0.00e+00	1323.00
IUUC-Psi-093096	Pelodiscus sinensis	46.87	0.00e+00	1154.00
IUUC-Pma-094571	Petromyzon marinus	38.34	1.00e-69	256.00
IUUC-Pfo-096348	Poecilia formosa	66.96	0.00e+00	1850.00
IUUC-Pab-098153	Pongo abelii	47.07	0.00e+00	1338.00
IUUC-Pca-100957	Procavia capensis	44.91	0.00e+00	1261.00
IUUC-Pva-102439	Pteropus vampyrus	47.37	0.00e+00	1355.00
IUUC-Rno-105891	Rattus norvegicus	46.49	0.00e+00	1269.00
IUUC-Sha-107181	Sarcophilus harrisii	47.53	0.00e+00	1321.00
IUUC-Ssc-115413	Sus scrofa	47.36	0.00e+00	1366.00
IUUC-Tgu-117082	Taeniopygia guttata	47.14	0.00e+00	1301.00
IUUC-Tsy-119629	Tarsius syrichta	63.36	9.00e-117	415.00
IUUC-Tni-120240	Tetraodon nigroviridis	75.85	0.00e+00	2126.00
IUUC-Tbe-127673	Tupaia belangeri	40.65	0.00e+00	1039.00
IUUC-Ttr-128562	Tursiops truncatus	45.04	0.00e+00	1255.00
IUUC-Vpa-130596	Vicugna pacos	50.45	0.00e+00	1111.00
IUUC-Xtr-132469	Xenopus tropicalis	47.04	0.00e+00	1284.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence