iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-132923

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING finger and transmembrane domain-containing protein 1

Genbank Nucleotide ID

CR761344

Gene Name

rnft1; TEgg046i15.1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000026210.2	ENSXETT00000055374.2	ENSXETP00000055374.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.70e-10	40.0	356	394

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC+ +f + p+vl C+Hvf+++C+  w       +ke +CPlCr
   Q: 356  CAICQAEFIK-PIVLVCQHVFCEECISLW------FNKEKTCPLCR 394
           **********.999***************......**********8 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MKHRPVHERQ CSTETKNWKE NTQLIMQSSS GHTHHQPGSN DSPSVCMSLP VPQLSAEGSC 60
TAGDVTIDLS SPESHHGARS SSRRVRPGNG RSLSRHGHTH SHDANGPEDA NDADSREQSN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGGTCTTGA GCACCCGGAA CTTGCTTGGG TCACTCAAAT TAGAGCATTC TGATTGACCT 60
TTCCTCCAAT TAAAACTATC TGCTACCTTT TTCCAGAGAG ATGGGCTATA ATTTCTGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

xtr:549103

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001586	Ailuropoda melanoleuca	58.60	1.00e-109	389.00
IUUC-Apl-003875	Anas platyrhynchos	58.78	9.00e-106	376.00
IUUC-Aca-004325	Anolis carolinensis	50.12	2.00e-87	315.00
IUUC-Ame-010748	Astyanax mexicanus	54.05	3.00e-86	311.00
IUUC-Bta-013167	Bos taurus	56.70	4.00e-114	404.00
IUUC-Cja-019669	Callithrix jacchus	58.65	1.00e-116	412.00
IUUC-Cfa-020610	Canis familiaris	55.89	5.00e-113	400.00
IUUC-Cpo-021979	Cavia porcellus	56.75	2.00e-103	369.00
IUUC-Cre-022592	Chlamydomonas reinhardtii	42.19	4.00e-11	62.40
IUUC-Csa-023752	Chlorocebus sabaeus	57.62	2.00e-119	422.00
IUUC-Cho-024880	Choloepus hoffmanni	52.51	2.00e-97	348.00
IUUC-Dre-028522	Danio rerio	44.24	2.00e-76	279.00
IUUC-Dno-029312	Dasypus novemcinctus	60.33	2.00e-111	395.00
IUUC-Dor-030524	Dipodomys ordii	50.92	2.00e-76	279.00
IUUC-Ete-032456	Echinops telfairi	51.13	4.00e-100	358.00
IUUC-Eeu-034649	Erinaceus europaeus	50.51	1.00e-36	147.00
IUUC-Fca-036321	Felis catus	53.90	8.00e-106	376.00
IUUC-Fal-036873	Ficedula albicollis	58.88	2.00e-106	379.00
IUUC-Gmo-038501	Gadus morhua	47.65	6.00e-71	261.00
IUUC-Gga-040583	Gallus gallus	64.45	1.00e-99	356.00
IUUC-Gac-042530	Gasterosteus aculeatus	50.97	3.00e-77	281.00
IUUC-Ggo-045577	Gorilla gorilla	55.34	1.00e-113	402.00
IUUC-Hsa-046395	Homo sapiens	56.90	4.00e-118	417.00
IUUC-Itr-048888	Ictidomys tridecemlineatus	57.21	4.00e-116	411.00
IUUC-Lch-049516	Latimeria chalumnae	54.33	5.00e-109	387.00
IUUC-Loc-052692	Lepisosteus oculatus	46.97	1.00e-86	313.00
IUUC-Laf-054478	Loxodonta africana	58.75	4.00e-117	414.00
IUUC-Mcc-055064	Macaca mulatta	55.17	5.00e-96	344.00
IUUC-Meu-056056	Macropus eugenii	52.33	6.00e-92	330.00
IUUC-Mga-059908	Meleagris gallopavo	64.82	1.00e-82	299.00
IUUC-Mdo-063071	Monodelphis domestica	56.50	4.00e-113	401.00
IUUC-Mmu-063446	Mus musculus	56.61	1.00e-109	389.00
IUUC-Mpu-065810	Mustela putorius furo	55.68	5.00e-95	341.00
IUUC-Nle-069009	Nomascus leucogenys	56.67	2.00e-118	418.00
IUUC-Ont-071863	Oreochromis niloticus	52.29	3.00e-78	285.00
IUUC-Oan-073490	Ornithorhynchus anatinus	62.57	4.00e-115	407.00
IUUC-Ocu-074346	Oryctolagus cuniculus	56.72	2.00e-111	395.00
IUUC-Ola-086809	Oryzias latipes	51.21	1.00e-72	266.00
IUUC-Oga-087950	Otolemur garnettii	57.64	8.00e-114	403.00
IUUC-Oar-089816	Ovis aries	57.01	2.00e-114	405.00
IUUC-Ptr-090736	Pan troglodytes	56.67	3.00e-117	415.00
IUUC-Psi-093766	Pelodiscus sinensis	63.38	2.00e-97	348.00
IUUC-Pfo-097090	Poecilia formosa	52.70	8.00e-70	257.00
IUUC-Pab-098474	Pongo abelii	57.52	8.00e-120	423.00
IUUC-Rno-105126	Rattus norvegicus	57.14	6.00e-112	397.00
IUUC-Sha-107537	Sarcophilus harrisii	56.50	5.00e-113	400.00
IUUC-Sar-113494	Sorex araneus	65.62	2.00e-32	132.00
IUUC-Ssc-116039	Sus scrofa	53.91	3.00e-80	291.00
IUUC-Tgu-117409	Taeniopygia guttata	65.32	1.00e-101	362.00
IUUC-Tru-117926	Takifugu rubripes	51.56	2.00e-71	262.00
IUUC-Tsy-118995	Tarsius syrichta	55.10	2.00e-108	385.00
IUUC-Tni-120361	Tetraodon nigroviridis	50.49	1.00e-77	283.00
IUUC-Tbe-128158	Tupaia belangeri	42.64	1.00e-63	236.00
IUUC-Ttr-128496	Tursiops truncatus	56.19	2.00e-110	392.00
IUUC-Vpa-130045	Vicugna pacos	49.16	2.00e-56	212.00
IUUC-Xma-134146	Xiphophorus maculatus	53.04	8.00e-75	273.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence