iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112241

Ensembl Protein ID

PGSC0003DMT400056966

UniProt Accession

M1C059; M1C059_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400022149	PGSC0003DMT400056966	PGSC0003DMT400056966
PGSC0003DMG400022149	PGSC0003DMT400056967	PGSC0003DMT400056967

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.60e-30	103.9	63	102
UBD/Beta-Prp	1.70e-43	150.2	113	295

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHtdsv  l++      l++++s+D+t+++WD r+g++ +
   Q: 63   GHTDSVDQLCWdpKHaELIATASGDKTVRLWDARSGKCSQ 102
           8**********9533799*******************987 PP

UBD/Beta-Prp

   S: 58   vkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvh 146
           ++++pdg  ++ g +D+ + + d++++k++h+ k  +++v  ++++  gd +  ++   t++v   ++ q ++ tl+ h++   c++++
   Q: 113  ITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRK-FNYEVNEIAWNTGGDMFFLTTGNGTVEVLAYPSLQAVN-TLNAHTAGCYCIAID 199
           789*******************************.************99**************999*******.*************** PP
   S: 147  pdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnde 235
           p g++++ Gs+D+ v lW++k + +lrt+t+  + +v+ +sf+++g +++s+s+d  + +  +qtg+ v++    ++ ++sv+  p+++
   Q: 200  PLGRYFAVGSADSLVSLWSIKEMLCLRTFTK-LEWPVRTISFNHTGDYIASASEDLFIDIAYVQTGRSVHQIP-CRAAMNSVEWNPKQN 286
           ******************************9.**********************************9666555.57899********** PP
   S: 236  rlvsgssDg 244
           +l+ +++D+
   Q: 287  LLAFAGDDK 295
           ******997 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MAETIPFKNL HSREYQGHKK KVHSVAWNCS GTKLASGSVD QTARIWQIEP HGHGKVKDVE 60
LKGHTDSVDQ LCWDPKHAEL IATASGDKTV RLWDARSGKC SQQVELSGEN INITYKPDGT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAACATTGTG TGTCGTTTTA TCGTCTTCTA AACAAGAAAA ATATTCAGAG AAGTAAACGG 60
AGCGAACAAG CAGAGTAATG GCGGAAACAA TACCCTTCAA AAACCTCCAT AGCAGAGAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000347--C:THO complex
GO:0010267--P:production of ta-siRNAs involved in RNA interference

KEGG

sot:102597071

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000099	Aegilops tauschii	79.05	7.00e-146	508.00
IUUC-Aml-001264	Ailuropoda melanoleuca	51.32	1.00e-93	335.00
IUUC-Atr-003050	Amborella trichopoda	88.75	1.00e-171	593.00
IUUC-Apl-003426	Anas platyrhynchos	44.66	1.00e-65	241.00
IUUC-Aca-004931	Anolis carolinensis	49.54	4.00e-65	239.00
IUUC-Aly-006237	Arabidopsis lyrata	86.82	3.00e-167	579.00
IUUC-Ath-007581	Arabidopsis thaliana	87.14	3.00e-167	579.00
IUUC-Acl-008253	Aspergillus clavatus	29.61	6.00e-43	166.00
IUUC-Afl-008519	Aspergillus flavus	34.60	7.00e-46	176.00
IUUC-Afu-008886	Aspergillus fumigatus	29.24	8.00e-39	153.00
IUUC-Ani-009275	Aspergillus nidulans	30.58	2.00e-42	165.00
IUUC-Ang-009862	Aspergillus niger	32.25	8.00e-44	169.00
IUUC-Ate-010247	Aspergillus terreus	31.02	3.00e-42	164.00
IUUC-Ame-010828	Astyanax mexicanus	51.48	3.00e-95	340.00
IUUC-Bgr-012163	Blumeria graminis	33.06	2.00e-35	141.00
IUUC-Bta-013514	Bos taurus	44.70	3.00e-78	283.00
IUUC-Bci-013639	Botrytis cinerea	30.39	1.00e-43	168.00
IUUC-Bdi-015049	Brachypodium distachyon	78.91	3.00e-151	526.00
IUUC-Bol-015401	Brassica oleracea	82.87	3.00e-161	559.00
IUUC-Bra-017867	Brassica rapa	83.18	1.00e-161	561.00
IUUC-Cel-018699	Caenorhabditis elegans	28.93	1.00e-34	139.00
IUUC-Cja-019591	Callithrix jacchus	51.32	6.00e-94	336.00
IUUC-Cfa-020692	Canis familiaris	51.32	6.00e-94	336.00
IUUC-Cpo-022135	Cavia porcellus	44.59	1.00e-73	268.00
IUUC-Cre-022572	Chlamydomonas reinhardtii	34.20	3.00e-47	181.00
IUUC-Csa-023408	Chlorocebus sabaeus	51.32	7.00e-94	335.00
IUUC-Cho-024340	Choloepus hoffmanni	49.75	5.00e-58	215.00
IUUC-Cin-025418	Ciona intestinalis	51.13	2.00e-41	159.00
IUUC-Csv-026130	Ciona savignyi	52.48	2.00e-98	350.00
IUUC-Cgl-026744	Colletotrichum gloeosporioides	31.07	6.00e-46	176.00
IUUC-Cne-026775	Cryptococcus neoformans	41.18	1.00e-20	93.60
IUUC-Dre-028634	Danio rerio	51.80	6.00e-96	342.00
IUUC-Dno-029449	Dasypus novemcinctus	51.32	7.00e-94	335.00
IUUC-Dor-030301	Dipodomys ordii	55.48	7.00e-53	199.00
IUUC-Dse-031341	Dothistroma septosporum	29.62	4.00e-36	144.00
IUUC-Dme-031674	Drosophila melanogaster	51.51	2.00e-84	304.00
IUUC-Ete-033136	Echinops telfairi	51.32	5.00e-93	333.00
IUUC-Eca-034432	Equus caballus	46.23	9.00e-84	302.00
IUUC-Fca-035694	Felis catus	51.32	6.00e-94	336.00
IUUC-Fal-037328	Ficedula albicollis	51.15	8.00e-95	338.00
IUUC-Fox-037894	Fusarium oxysporum	31.60	1.00e-48	185.00
IUUC-Fso-038266	Fusarium solani	30.12	8.00e-45	172.00
IUUC-Gmo-039617	Gadus morhua	51.15	3.00e-93	333.00
IUUC-Ggr-039819	Gaeumannomyces graminis	29.58	2.00e-37	148.00
IUUC-Gga-041164	Gallus gallus	51.15	2.00e-94	338.00
IUUC-Gac-042407	Gasterosteus aculeatus	51.48	1.00e-94	338.00
IUUC-Gma-043718	Glycine max	88.50	1.00e-171	594.00
IUUC-Ggo-044989	Gorilla gorilla	51.32	8.00e-94	335.00
IUUC-Hsa-046784	Homo sapiens	51.32	7.00e-94	335.00
IUUC-Hvu-047633	Hordeum vulgare	80.00	2.00e-104	370.00
IUUC-Itr-048184	Ictidomys tridecemlineatus	38.49	1.00e-54	205.00
IUUC-Kpa-049182	Komagataella pastoris	23.73	7.00e-15	73.60
IUUC-Lch-049894	Latimeria chalumnae	51.15	5.00e-94	336.00
IUUC-Lpe-051061	Leersia perrieri	69.35	5.00e-126	442.00
IUUC-Loc-052424	Lepisosteus oculatus	51.15	1.00e-94	338.00
IUUC-Lma-053127	Leptosphaeria maculans	32.12	9.00e-48	184.00
IUUC-Laf-053396	Loxodonta africana	51.66	2.00e-94	337.00
IUUC-Mcc-055517	Macaca mulatta	51.32	7.00e-94	335.00
IUUC-Meu-056034	Macropus eugenii	51.32	1.00e-93	335.00
IUUC-Mor-057011	Magnaporthe oryzae	29.02	3.00e-25	108.00
IUUC-Mpo-057490	Magnaporthe poae	29.49	2.00e-37	148.00
IUUC-Mtr-057927	Medicago truncatula	86.90	2.00e-168	583.00
IUUC-Mla-058945	Melampsora laricipopulina	36.52	2.00e-48	184.00
IUUC-Mga-060155	Meleagris gallopavo	52.70	1.00e-78	285.00
IUUC-Mvi-060344	Microbotryum violaceum	32.05	8.00e-45	172.00
IUUC-Mmr-060834	Microcebus murinus	51.66	6.00e-94	336.00
IUUC-Mdo-062587	Monodelphis domestica	51.32	9.00e-94	335.00
IUUC-Mmu-063395	Mus musculus	51.32	6.00e-94	336.00
IUUC-Mac-064579	Musa acuminata	85.44	1.00e-165	573.00
IUUC-Mpu-066688	Mustela putorius furo	54.15	2.00e-84	305.00
IUUC-Mlu-067299	Myotis lucifugus	51.32	2.00e-93	334.00
IUUC-Nfi-068562	Neosartorya fischeri	30.24	4.00e-41	160.00
IUUC-Ncr-068654	Neurospora crassa	32.03	8.00e-40	156.00
IUUC-Nle-069736	Nomascus leucogenys	50.66	2.00e-91	328.00
IUUC-Ont-071763	Oreochromis niloticus	51.15	2.00e-94	337.00
IUUC-Ocu-074909	Oryctolagus cuniculus	51.32	4.00e-94	336.00
IUUC-Oba-075902	Oryza barthii	70.00	2.00e-126	443.00
IUUC-Obr-076613	Oryza brachyantha	78.06	7.00e-147	511.00
IUUC-Ogl-077009	Oryza glaberrima	77.74	6.00e-147	511.00
IUUC-Ogu-078344	Oryza glumaepatula	70.00	2.00e-126	443.00
IUUC-Oin-079773	Oryza indica	77.74	6.00e-147	511.00
IUUC-Olo-080474	Oryza longistaminata	73.63	4.00e-86	309.00
IUUC-Ome-081837	Oryza meridionalis	66.46	4.00e-59	218.00
IUUC-Oni-082263	Oryza nivara	70.00	2.00e-126	443.00
IUUC-Opu-083813	Oryza punctata	78.06	1.00e-147	514.00
IUUC-Oru-084610	Oryza rufipogon	70.00	2.00e-126	443.00
IUUC-Osa-085415	Oryza sativa	77.42	2.00e-146	510.00
IUUC-Ola-086659	Oryzias latipes	51.48	1.00e-94	338.00
IUUC-Olu-087649	Ostreococcus lucimarinus	40.89	3.00e-62	230.00
IUUC-Oga-087923	Otolemur garnettii	50.99	1.00e-93	334.00
IUUC-Oar-089688	Ovis aries	51.32	2.00e-93	334.00
IUUC-Ptr-091628	Pan troglodytes	51.32	7.00e-94	335.00
IUUC-Pan-092586	Papio anubis	50.82	3.00e-92	330.00
IUUC-Psi-093701	Pelodiscus sinensis	52.33	2.00e-62	230.00
IUUC-Pma-094465	Petromyzon marinus	51.48	1.00e-92	331.00
IUUC-Pno-094767	Phaeosphaeria nodorum	32.22	5.00e-44	171.00
IUUC-Ppa-095195	Physcomitrella patens	86.23	9.00e-163	564.00
IUUC-Pfo-097383	Poecilia formosa	50.82	2.00e-93	334.00
IUUC-Pab-098669	Pongo abelii	51.32	6.00e-94	336.00
IUUC-Pop-099409	Populus trichocarpa	88.82	7.00e-173	598.00
IUUC-Pca-100769	Procavia capensis	44.77	2.00e-72	264.00
IUUC-Ppe-101321	Prunus persica	87.38	8.00e-170	588.00
IUUC-Pva-102759	Pteropus vampyrus	51.32	5.00e-94	336.00
IUUC-Pgr-103535	Puccinia graminis	38.78	2.00e-55	207.00
IUUC-Ptt-103820	Puccinia triticina	38.46	1.00e-55	208.00
IUUC-Pte-104271	Pyrenophora teres	32.12	2.00e-41	161.00
IUUC-Pyt-104500	Pyrenophora triticirepentis	33.33	2.00e-39	155.00
IUUC-Rno-106126	Rattus norvegicus	51.32	4.00e-94	336.00
IUUC-Sce-106455	Saccharomyces cerevisiae	22.76	9.00e-12	63.50
IUUC-Sha-107146	Sarcophilus harrisii	50.33	5.00e-91	326.00
IUUC-Sja-107865	Schizosaccharomyces japonicus	34.80	8.00e-55	206.00
IUUC-Spo-108324	Schizosaccharomyces pombe	35.05	1.00e-54	205.00
IUUC-Smo-108990	Selaginella moellendorffii	79.94	8.00e-156	541.00
IUUC-Sit-110773	Setaria italica	77.12	2.00e-144	504.00
IUUC-Sly-111619	Solanum lycopersicum	99.04	0.00e+00	651.00
IUUC-Sbi-114842	Sorghum bicolor	76.14	2.00e-142	497.00
IUUC-Sre-115070	Sporisorium reilianum	33.73	1.00e-50	192.00
IUUC-Ssc-115581	Sus scrofa	51.32	5.00e-94	336.00
IUUC-Tgu-117354	Taeniopygia guttata	51.54	4.00e-91	326.00
IUUC-Tru-117745	Takifugu rubripes	50.00	8.00e-93	332.00
IUUC-Tni-120050	Tetraodon nigroviridis	49.68	4.00e-91	327.00
IUUC-Tca-121279	Theobroma cacao	89.78	1.00e-173	600.00
IUUC-Tre-121952	Trichoderma reesei	32.92	1.00e-49	189.00
IUUC-Tvi-122581	Trichoderma virens	32.62	3.00e-50	191.00
IUUC-Tae-125697	Triticum aestivum	77.96	5.00e-150	522.00
IUUC-Tur-126279	Triticum urartu	75.56	2.00e-144	503.00
IUUC-Tme-127000	Tuber melanosporum	32.58	5.00e-42	163.00
IUUC-Ttr-128405	Tursiops truncatus	51.94	3.00e-82	296.00
IUUC-Uma-129547	Ustilago maydis	34.42	2.00e-49	188.00
IUUC-Vda-129689	Verticillium dahliae	29.83	2.00e-39	154.00
IUUC-Vvi-131345	Vitis vinifera	90.42	4.00e-175	605.00
IUUC-Xtr-132136	Xenopus tropicalis	50.00	9.00e-92	328.00
IUUC-Xma-133767	Xiphophorus maculatus	50.82	2.00e-93	334.00
IUUC-Yli-134522	Yarrowia lipolytica	27.65	5.00e-30	124.00
IUUC-Zma-135816	Zea mays	74.84	4.00e-140	489.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence