iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cfa-021090

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAEX03017096

Gene Name

WDR53

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCAFG00000013024.2	ENSCAFT00000020660.2	ENSCAFP00000019176.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-26	91.3	239	276

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gHt +v+ ++f ++  ll++G++Dg+i++WD+++ v  
   Q: 239  GHTLGVSQVCFlPEsYLLLTGGNDGKIMLWDVSSEVEK 276
           8999********88899***************988765 PP

Organism

Canis familiaris

Protein Sequence
(Fasta)

MAVKWTGGHS SPILCLNASQ EGLVASGAEG GDLMAWGEDG TPLGHTRFQG ADDVTSILFS 60
PSCPTKLYAS HGETISLLDV RSLKGSLDHF HVNEEEINCL SLNETENLLA SADDSGAIKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGTCA AGTGGACTGG TGGACATTCT TCTCCTATTC TCTGCCTGAA TGCAAGTCAA 60
GAAGGGCTAG TGGCTTCTGG AGCAGAGGGT GGTGATCTCA TGGCTTGGGG TGAAGATGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000124	Aegilops tauschii	24.62	7.00e-16	78.60
IUUC-Aml-001203	Ailuropoda melanoleuca	96.37	0.00e+00	677.00
IUUC-Atr-002680	Amborella trichopoda	25.97	2.00e-23	103.00
IUUC-Apl-003656	Anas platyrhynchos	59.38	2.00e-109	388.00
IUUC-Aca-004987	Anolis carolinensis	63.79	3.00e-126	444.00
IUUC-Aly-006254	Arabidopsis lyrata	30.79	9.00e-29	120.00
IUUC-Ath-006632	Arabidopsis thaliana	29.61	7.00e-27	114.00
IUUC-Ame-011032	Astyanax mexicanus	47.27	4.00e-94	337.00
IUUC-Bta-012588	Bos taurus	85.75	1.00e-170	592.00
IUUC-Bdi-014532	Brachypodium distachyon	26.04	6.00e-25	108.00
IUUC-Bol-015542	Brassica oleracea	28.15	7.00e-21	95.90
IUUC-Bra-017046	Brassica rapa	30.67	4.00e-28	120.00
IUUC-Cja-019365	Callithrix jacchus	91.06	0.00e+00	678.00
IUUC-Cpo-021517	Cavia porcellus	83.84	2.00e-180	624.00
IUUC-Csa-023041	Chlorocebus sabaeus	89.66	0.00e+00	642.00
IUUC-Cho-024801	Choloepus hoffmanni	88.83	0.00e+00	660.00
IUUC-Dre-028437	Danio rerio	47.73	2.00e-88	319.00
IUUC-Dno-029267	Dasypus novemcinctus	89.11	0.00e+00	664.00
IUUC-Ete-032726	Echinops telfairi	72.63	5.00e-151	526.00
IUUC-Eca-033621	Equus caballus	92.39	3.00e-180	624.00
IUUC-Eeu-034461	Erinaceus europaeus	78.77	8.00e-166	576.00
IUUC-Fca-036410	Felis catus	94.13	0.00e+00	662.00
IUUC-Fal-036676	Ficedula albicollis	67.23	1.00e-133	469.00
IUUC-Gmo-039597	Gadus morhua	35.42	5.00e-18	85.50
IUUC-Gga-040760	Gallus gallus	64.82	5.00e-74	270.00
IUUC-Gac-041905	Gasterosteus aculeatus	49.59	9.00e-92	330.00
IUUC-Gma-043066	Glycine max	30.77	1.00e-17	84.00
IUUC-Ggo-044881	Gorilla gorilla	90.22	0.00e+00	645.00
IUUC-Hsa-046836	Homo sapiens	89.94	0.00e+00	642.00
IUUC-Hvu-047651	Hordeum vulgare	25.19	2.00e-23	103.00
IUUC-Itr-048206	Ictidomys tridecemlineatus	91.04	0.00e+00	641.00
IUUC-Lch-050406	Latimeria chalumnae	55.01	1.00e-95	343.00
IUUC-Loc-052878	Lepisosteus oculatus	54.27	1.00e-101	362.00
IUUC-Laf-053547	Loxodonta africana	87.39	0.00e+00	641.00
IUUC-Mcc-054646	Macaca mulatta	89.66	0.00e+00	641.00
IUUC-Meu-056381	Macropus eugenii	75.98	2.00e-162	564.00
IUUC-Mtr-058656	Medicago truncatula	25.37	1.00e-18	87.40
IUUC-Mmr-061601	Microcebus murinus	88.24	0.00e+00	655.00
IUUC-Mdo-062305	Monodelphis domestica	76.54	3.00e-165	573.00
IUUC-Mmu-063213	Mus musculus	84.36	6.00e-173	599.00
IUUC-Mac-064940	Musa acuminata	25.06	2.00e-29	122.00
IUUC-Mpu-066629	Mustela putorius furo	94.97	0.00e+00	674.00
IUUC-Nle-069860	Nomascus leucogenys	89.94	0.00e+00	642.00
IUUC-Opr-071180	Ochotona princeps	83.10	1.00e-151	529.00
IUUC-Ont-071912	Oreochromis niloticus	47.01	4.00e-98	351.00
IUUC-Ocu-074874	Oryctolagus cuniculus	88.27	0.00e+00	657.00
IUUC-Oba-075815	Oryza barthii	25.34	7.00e-14	71.60
IUUC-Obr-076835	Oryza brachyantha	32.08	8.00e-19	87.40
IUUC-Ogu-077977	Oryza glumaepatula	23.71	5.00e-14	72.00
IUUC-Oin-079206	Oryza indica	25.91	3.00e-24	106.00
IUUC-Olo-080621	Oryza longistaminata	27.60	2.00e-12	66.60
IUUC-Ome-081261	Oryza meridionalis	23.58	9.00e-13	67.80
IUUC-Opu-083256	Oryza punctata	28.93	4.00e-14	72.40
IUUC-Osa-085892	Oryza sativa	25.91	3.00e-24	106.00
IUUC-Ola-086701	Oryzias latipes	48.17	9.00e-93	333.00
IUUC-Olu-087593	Ostreococcus lucimarinus	22.83	2.00e-08	53.50
IUUC-Oga-088152	Otolemur garnettii	89.64	0.00e+00	660.00
IUUC-Oar-089681	Ovis aries	91.06	0.00e+00	635.00
IUUC-Ptr-091142	Pan troglodytes	90.22	0.00e+00	644.00
IUUC-Pan-092435	Papio anubis	89.66	1.00e-177	615.00
IUUC-Psi-093255	Pelodiscus sinensis	69.01	7.00e-147	513.00
IUUC-Ppa-095829	Physcomitrella patens	28.05	1.00e-29	124.00
IUUC-Pfo-097339	Poecilia formosa	45.55	3.00e-87	315.00
IUUC-Pab-098274	Pongo abelii	89.94	0.00e+00	633.00
IUUC-Pop-099705	Populus trichocarpa	25.27	2.00e-26	113.00
IUUC-Pca-100451	Procavia capensis	85.92	0.00e+00	643.00
IUUC-Ppe-101220	Prunus persica	25.44	2.00e-26	113.00
IUUC-Pva-102385	Pteropus vampyrus	93.30	0.00e+00	659.00
IUUC-Rno-105765	Rattus norvegicus	83.80	6.00e-172	596.00
IUUC-Sha-106533	Sarcophilus harrisii	75.14	3.00e-162	564.00
IUUC-Smo-108698	Selaginella moellendorffii	26.39	4.00e-29	122.00
IUUC-Sit-110297	Setaria italica	24.92	2.00e-20	93.20
IUUC-Sly-111617	Solanum lycopersicum	32.20	2.00e-24	106.00
IUUC-Stu-112531	Solanum tuberosum	32.20	4.00e-24	105.00
IUUC-Sar-113647	Sorex araneus	84.08	1.00e-179	622.00
IUUC-Sbi-114621	Sorghum bicolor	26.50	3.00e-26	112.00
IUUC-Tgu-116482	Taeniopygia guttata	67.23	2.00e-128	451.00
IUUC-Tru-118622	Takifugu rubripes	48.64	2.00e-88	318.00
IUUC-Tsy-119474	Tarsius syrichta	87.99	0.00e+00	660.00
IUUC-Tni-120250	Tetraodon nigroviridis	47.03	2.00e-80	292.00
IUUC-Tca-121583	Theobroma cacao	27.86	1.00e-29	123.00
IUUC-Tae-123764	Triticum aestivum	26.23	2.00e-25	110.00
IUUC-Tur-126076	Triticum urartu	23.41	1.00e-13	70.50
IUUC-Tbe-127545	Tupaia belangeri	89.08	2.00e-180	624.00
IUUC-Ttr-128497	Tursiops truncatus	92.46	0.00e+00	648.00
IUUC-Vpa-130772	Vicugna pacos	91.62	0.00e+00	648.00
IUUC-Vvi-131632	Vitis vinifera	25.69	2.00e-31	129.00
IUUC-Xma-133432	Xiphophorus maculatus	46.19	1.00e-90	326.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence