iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cja-019365

UUCD1 version

UUC-CaJ-00601

Ensembl Protein ID

ENSCJAP00000003009.2

UniProt Accession

F7GQ57; F7GQ57_CALJA

Genbank Protein ID

JAB02932.1; JAB12344.1; JAB44620.1

Protein Name

WD repeat-containing protein 53

Genbank Nucleotide ID

ACFV01038490; GAMS01010792; GAMP01008135

Gene Name

WDR53

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000001689.2	ENSCJAT00000003178.2	ENSCJAP00000003009.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.70e-24	84.4	239	269

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gHt +v+ ++f ++  ll++G++Dg+i++WD
   Q: 239  GHTLGVSQVCFlPEsYLLLTGGNDGKIMLWD 269
           8999********88899************** PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MAVKWTGGHS SPILCLNASK EGLVASGAEG GDLTAWGEDG TPLGHTQFPG ADDVTSVLFS 60
PSCPTKLYAS HGETISILDV RSLKGSLDHF HVNEEEINCL SLNQTENLLA SADDSGAIKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGATCATTC AGTTTTTAAA GACTTTGGCC TTTATCTTGT CTGCCACAGT ACAGCTGAGG 60
CAGAGCCTTT CAAGGATCCC ATGTTGTTAT TCTGGTGCTA ATCTAGTCGA GTCACTAAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

KEGG

cjc:100385885

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000124	Aegilops tauschii	26.67	1.00e-13	71.20
IUUC-Aml-001203	Ailuropoda melanoleuca	92.46	0.00e+00	652.00
IUUC-Atr-002680	Amborella trichopoda	25.45	8.00e-22	97.80
IUUC-Apl-003656	Anas platyrhynchos	58.54	1.00e-107	382.00
IUUC-Aca-004987	Anolis carolinensis	63.79	8.00e-126	443.00
IUUC-Aly-006254	Arabidopsis lyrata	31.13	1.00e-28	120.00
IUUC-Ath-006632	Arabidopsis thaliana	29.84	7.00e-27	114.00
IUUC-Ame-011032	Astyanax mexicanus	46.23	3.00e-92	332.00
IUUC-Bta-012588	Bos taurus	83.52	5.00e-165	573.00
IUUC-Bdi-014532	Brachypodium distachyon	27.15	2.00e-25	110.00
IUUC-Bol-015542	Brassica oleracea	28.29	1.00e-20	95.10
IUUC-Bra-017046	Brassica rapa	31.00	6.00e-28	119.00
IUUC-Cfa-021090	Canis familiaris	91.06	0.00e+00	651.00
IUUC-Cpo-021517	Cavia porcellus	85.24	0.00e+00	635.00
IUUC-Csa-023041	Chlorocebus sabaeus	95.53	0.00e+00	678.00
IUUC-Cho-024801	Choloepus hoffmanni	88.83	0.00e+00	655.00
IUUC-Dre-028437	Danio rerio	47.99	7.00e-87	313.00
IUUC-Dno-029267	Dasypus novemcinctus	89.11	0.00e+00	658.00
IUUC-Ete-032726	Echinops telfairi	74.30	2.00e-152	531.00
IUUC-Eca-033621	Equus caballus	91.29	5.00e-180	623.00
IUUC-Eeu-034461	Erinaceus europaeus	77.09	1.00e-162	565.00
IUUC-Fca-036410	Felis catus	91.06	0.00e+00	646.00
IUUC-Fal-036676	Ficedula albicollis	65.55	8.00e-132	462.00
IUUC-Gmo-039597	Gadus morhua	36.30	5.00e-18	85.10
IUUC-Gga-040760	Gallus gallus	64.82	3.00e-73	267.00
IUUC-Gac-041905	Gasterosteus aculeatus	50.14	3.00e-93	335.00
IUUC-Gma-043066	Glycine max	23.65	3.00e-17	82.80
IUUC-Ggo-044881	Gorilla gorilla	95.53	0.00e+00	678.00
IUUC-Hsa-046836	Homo sapiens	95.53	0.00e+00	676.00
IUUC-Hvu-047651	Hordeum vulgare	25.52	1.00e-23	104.00
IUUC-Itr-048206	Ictidomys tridecemlineatus	92.44	0.00e+00	657.00
IUUC-Lch-050406	Latimeria chalumnae	53.74	8.00e-95	340.00
IUUC-Loc-052878	Lepisosteus oculatus	52.73	6.00e-99	353.00
IUUC-Laf-053547	Loxodonta africana	88.24	0.00e+00	647.00
IUUC-Mcc-054646	Macaca mulatta	94.97	0.00e+00	673.00
IUUC-Meu-056381	Macropus eugenii	77.93	1.00e-165	575.00
IUUC-Mtr-058656	Medicago truncatula	26.60	4.00e-18	85.90
IUUC-Mmr-061601	Microcebus murinus	90.48	0.00e+00	667.00
IUUC-Mdo-062305	Monodelphis domestica	78.21	3.00e-167	580.00
IUUC-Mmu-063213	Mus musculus	85.20	6.00e-174	603.00
IUUC-Mac-064940	Musa acuminata	25.87	6.00e-30	124.00
IUUC-Mpu-066629	Mustela putorius furo	91.34	0.00e+00	652.00
IUUC-Nle-069860	Nomascus leucogenys	95.53	0.00e+00	675.00
IUUC-Opr-071180	Ochotona princeps	85.92	8.00e-158	549.00
IUUC-Ont-071912	Oreochromis niloticus	47.67	4.00e-98	351.00
IUUC-Ocu-074874	Oryctolagus cuniculus	89.94	0.00e+00	671.00
IUUC-Oba-075815	Oryza barthii	25.00	3.00e-14	72.80
IUUC-Obr-076835	Oryza brachyantha	33.96	8.00e-20	90.90
IUUC-Ogu-077977	Oryza glumaepatula	30.62	1.00e-13	70.90
IUUC-Oin-079206	Oryza indica	27.20	1.00e-24	107.00
IUUC-Olo-080621	Oryza longistaminata	29.23	4.00e-13	68.90
IUUC-Ome-081261	Oryza meridionalis	24.60	7.00e-13	68.20
IUUC-Opu-083256	Oryza punctata	25.07	7.00e-15	74.70
IUUC-Osa-085892	Oryza sativa	27.20	1.00e-24	107.00
IUUC-Ola-086701	Oryzias latipes	47.69	8.00e-92	330.00
IUUC-Olu-087593	Ostreococcus lucimarinus	21.86	1.00e-07	50.40
IUUC-Oga-088152	Otolemur garnettii	90.76	0.00e+00	666.00
IUUC-Oar-089681	Ovis aries	89.11	2.00e-180	624.00
IUUC-Ptr-091142	Pan troglodytes	95.81	0.00e+00	677.00
IUUC-Pan-092435	Papio anubis	94.97	0.00e+00	648.00
IUUC-Psi-093255	Pelodiscus sinensis	70.22	4.00e-150	524.00
IUUC-Ppa-095829	Physcomitrella patens	29.79	6.00e-30	124.00
IUUC-Pfo-097339	Poecilia formosa	45.91	8.00e-88	317.00
IUUC-Pab-098274	Pongo abelii	94.97	0.00e+00	662.00
IUUC-Pop-099705	Populus trichocarpa	25.75	1.00e-27	117.00
IUUC-Pca-100451	Procavia capensis	87.36	0.00e+00	649.00
IUUC-Ppe-101220	Prunus persica	27.20	2.00e-27	116.00
IUUC-Pva-102385	Pteropus vampyrus	90.50	0.00e+00	649.00
IUUC-Rno-105765	Rattus norvegicus	83.52	8.00e-170	589.00
IUUC-Sha-106533	Sarcophilus harrisii	76.26	8.00e-163	566.00
IUUC-Smo-109248	Selaginella moellendorffii	27.11	3.00e-29	122.00
IUUC-Sit-110297	Setaria italica	26.75	3.00e-21	95.50
IUUC-Sly-111617	Solanum lycopersicum	31.86	8.00e-24	104.00
IUUC-Stu-112531	Solanum tuberosum	31.86	2.00e-23	103.00
IUUC-Sar-113647	Sorex araneus	81.84	1.00e-175	608.00
IUUC-Sbi-114621	Sorghum bicolor	27.08	1.00e-26	114.00
IUUC-Tgu-116482	Taeniopygia guttata	66.39	2.00e-127	448.00
IUUC-Tru-118622	Takifugu rubripes	48.51	1.00e-88	320.00
IUUC-Tsy-119474	Tarsius syrichta	89.39	0.00e+00	662.00
IUUC-Tni-120250	Tetraodon nigroviridis	47.70	1.00e-80	293.00
IUUC-Tca-121583	Theobroma cacao	27.30	1.00e-28	120.00
IUUC-Tae-123764	Triticum aestivum	31.63	1.00e-23	104.00
IUUC-Tur-126076	Triticum urartu	28.48	3.00e-12	66.20
IUUC-Tbe-127545	Tupaia belangeri	89.64	0.00e+00	630.00
IUUC-Ttr-128497	Tursiops truncatus	89.11	0.00e+00	629.00
IUUC-Vpa-130772	Vicugna pacos	89.39	0.00e+00	632.00
IUUC-Vvi-131632	Vitis vinifera	26.37	3.00e-31	129.00
IUUC-Xma-133432	Xiphophorus maculatus	46.46	3.00e-91	328.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence