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Tag Content
iUUCD ID IUUC-Pop-099614
Ensembl Protein ID POPTR_0014s07420.1
UniProt Accession B9IC87; B9IC87_POPTR
Genbank Protein ID EEE99087.2
Protein Name Ubiquitin-related modifier 1 homolog
Genbank Nucleotide ID CM000350
Gene Name POPTRDRAFT_244323; POPTR_0014s07420g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0014s07420 POPTR_0014s07420.1 POPTR_0014s07420.1
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
ULD/UDP/UBQ/UBQ_Other 44.29 4.00e-13 67.40 IUUC-Sce-106366
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Populus trichocarpa
Functional Description
(View)

Functional Description


     Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxidative stress specifically induces the formation of UBL-protein conjugates.
 Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxidative stress specifically induces the formation of UBL-protein conjugates.
Protein Sequence
(Fasta)
MQLTLEFGGG LELLCDSVKI HNVDVSPNNE VDKFTMKDLL VWVRANLIKE RPEMFMKDDS 60
VRPGVLVLVN DCDWELSGQL DTPLEEKDVV VFISTLHGG 99
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Protein Fasta Sequence


>IUUC-Pop-099614|ULD,UBQ_Other|Populus trichocarpa
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Nucleotide Sequence
(Fasta)
AAGAAAGAAA TCTCTACTAC TACGACTACC ACTCCCTAGG GTTCTTGCAG AAAGATTCGT 60
TGAAGCACCA TGCAACTCAC TCTTGAATTC GGGTATCTTT AAATTCTAAT TTATATCCCC 120
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Nucleotide Fasta Sequence


>IUUC-Pop-099614|ULD,UBQ_Other|Populus trichocarpa
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Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1017--Isopeptide bond
KW-1185--Reference proteome
KW-0819--tRNA processing
KW-0833--Ubl conjugation pathway
Interpro

IPR012675--Beta-grasp_dom
IPR016155--Mopterin_synth/thiamin_S_b
IPR015221--Urm1
Pfam

PF09138--Urm1
Gene Ontology

GO:0005829--C:cytosol
GO:0032447--P:protein urmylation
GO:0034227--P:tRNA thio-modification
GO:0002098--P:tRNA wobble uridine modification
KEGG pop:POPTR_0014s07420g
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002254 Ailuropoda melanoleuca 56.57 1.00e-28 116.00
IUUC-Atr-003089 Amborella trichopoda 69.70 6.00e-38 147.00
IUUC-Apl-003382 Anas platyrhynchos 54.84 3.00e-26 108.00
IUUC-Aca-004981 Anolis carolinensis 56.70 5.00e-28 115.00
IUUC-Aly-005517 Arabidopsis lyrata 81.32 3.00e-39 151.00
IUUC-Ath-006718 Arabidopsis thaliana 81.82 2.00e-36 142.00
IUUC-Ago-007917 Ashbya gossypii 39.60 1.00e-18 83.60
IUUC-Acl-008054 Aspergillus clavatus 54.00 5.00e-13 65.10
IUUC-Afl-008704 Aspergillus flavus 54.84 5.00e-15 71.60
IUUC-Aor-009890 Aspergillus oryzae 43.56 5.00e-19 85.50
IUUC-Bta-012448 Bos taurus 57.58 1.00e-28 116.00
IUUC-Bci-013865 Botrytis cinerea 39.60 6.00e-16 75.10
IUUC-Bdi-014980 Brachypodium distachyon 70.93 2.00e-30 122.00
IUUC-Bol-016055 Brassica oleracea 75.29 1.00e-33 134.00
IUUC-Bra-016845 Brassica rapa 75.29 1.00e-33 134.00
IUUC-Cel-018485 Caenorhabditis elegans 37.62 1.00e-12 63.50
IUUC-Cja-019587 Callithrix jacchus 56.57 1.00e-28 116.00
IUUC-Cfa-020653 Canis familiaris 56.57 2.00e-28 116.00
IUUC-Cpo-021622 Cavia porcellus 56.57 1.00e-28 116.00
IUUC-Cre-023015 Chlamydomonas reinhardtii 53.54 9.00e-28 114.00
IUUC-Csa-023756 Chlorocebus sabaeus 50.57 2.00e-20 90.90
IUUC-Cgl-026518 Colletotrichum gloeosporioides 37.62 4.00e-15 72.40
IUUC-Cne-026953 Cryptococcus neoformans 46.60 3.00e-22 97.10
IUUC-Cme-027314 Cyanidioschyzon merolae 47.96 1.00e-19 86.70
IUUC-Dre-027884 Danio rerio 59.60 2.00e-30 123.00
IUUC-Dno-029262 Dasypus novemcinctus 53.16 5.00e-20 89.70
IUUC-Dor-030601 Dipodomys ordii 56.25 2.00e-15 72.80
IUUC-Dme-031893 Drosophila melanogaster 48.48 4.00e-24 101.00
IUUC-Ete-032773 Echinops telfairi 55.67 5.00e-27 111.00
IUUC-Eca-034187 Equus caballus 55.56 2.00e-28 116.00
IUUC-Eeu-034808 Erinaceus europaeus 53.54 1.00e-27 113.00
IUUC-Fca-036107 Felis catus 55.56 3.00e-28 115.00
IUUC-Fal-036607 Ficedula albicollis 54.84 2.00e-25 105.00
IUUC-Fox-037698 Fusarium oxysporum 34.65 6.00e-14 68.60
IUUC-Gmo-039492 Gadus morhua 60.61 2.00e-29 119.00
IUUC-Ggr-039965 Gaeumannomyces graminis 36.27 1.00e-13 68.20
IUUC-Gga-041268 Gallus gallus 55.67 3.00e-28 115.00
IUUC-Gac-042111 Gasterosteus aculeatus 57.58 2.00e-29 119.00
IUUC-Gma-043240 Glycine max 78.82 2.00e-35 139.00
IUUC-Ggo-045176 Gorilla gorilla 52.63 9.00e-14 68.60
IUUC-Hsa-046077 Homo sapiens 54.55 6.00e-22 94.70
IUUC-Itr-048111 Ictidomys tridecemlineatus 57.14 5.00e-20 88.20
IUUC-Kpa-049157 Komagataella pastoris 39.60 7.00e-17 77.80
IUUC-Lch-049889 Latimeria chalumnae 53.54 7.00e-27 110.00
IUUC-Lpe-050783 Leersia perrieri 73.17 9.00e-31 124.00
IUUC-Loc-052400 Lepisosteus oculatus 57.58 1.00e-29 120.00
IUUC-Lma-053259 Leptosphaeria maculans 39.39 1.00e-15 74.30
IUUC-Laf-053596 Loxodonta africana 54.46 6.00e-27 111.00
IUUC-Mcc-054845 Macaca mulatta 56.67 1.00e-25 107.00
IUUC-Meu-055968 Macropus eugenii 56.70 5.00e-29 118.00
IUUC-Mor-057126 Magnaporthe oryzae 35.64 1.00e-12 64.70
IUUC-Mpo-057311 Magnaporthe poae 34.65 8.00e-14 68.90
IUUC-Mtr-058266 Medicago truncatula 80.46 3.00e-35 139.00
IUUC-Mla-058847 Melampsora laricipopulina 33.02 2.00e-07 47.00
IUUC-Mga-059468 Meleagris gallopavo 54.84 4.00e-26 108.00
IUUC-Mvi-060235 Microbotryum violaceum 29.05 2.00e-14 70.90
IUUC-Mdo-061948 Monodelphis domestica 54.55 3.00e-29 119.00
IUUC-Mmu-063946 Mus musculus 56.70 4.00e-28 115.00
IUUC-Mac-064812 Musa acuminata 78.82 1.00e-34 137.00
IUUC-Mpu-066763 Mustela putorius furo 56.57 3.00e-29 119.00
IUUC-Mlu-066970 Myotis lucifugus 55.26 3.00e-20 89.00
IUUC-Ncr-068824 Neurospora crassa 35.64 1.00e-13 67.40
IUUC-Nle-069849 Nomascus leucogenys 53.95 3.00e-20 90.50
IUUC-Opr-070227 Ochotona princeps 56.57 1.00e-28 116.00
IUUC-Ont-072530 Oreochromis niloticus 58.59 4.00e-29 118.00
IUUC-Oan-073191 Ornithorhynchus anatinus 54.95 2.00e-25 106.00
IUUC-Ocu-074460 Oryctolagus cuniculus 56.57 3.00e-28 115.00
IUUC-Oba-075499 Oryza barthii 73.49 2.00e-31 127.00
IUUC-Obr-076896 Oryza brachyantha 72.29 1.00e-30 125.00
IUUC-Ogl-077834 Oryza glaberrima 73.49 9.00e-32 127.00
IUUC-Ogu-078622 Oryza glumaepatula 73.49 9.00e-32 127.00
IUUC-Oin-079358 Oryza indica 73.49 2.00e-31 127.00
IUUC-Olo-081035 Oryza longistaminata 70.71 3.00e-34 137.00
IUUC-Oni-082425 Oryza nivara 73.49 9.00e-32 127.00
IUUC-Opu-083461 Oryza punctata 74.39 4.00e-31 126.00
IUUC-Oru-084875 Oryza rufipogon 74.65 4.00e-25 105.00
IUUC-Oga-089128 Otolemur garnettii 55.56 1.00e-28 117.00
IUUC-Oar-089896 Ovis aries 57.58 1.00e-28 116.00
IUUC-Ptr-091618 Pan troglodytes 52.63 9.00e-14 68.60
IUUC-Pan-092238 Papio anubis 50.57 2.00e-20 90.90
IUUC-Psi-093879 Pelodiscus sinensis 55.56 6.00e-28 114.00
IUUC-Pma-094484 Petromyzon marinus 56.79 8.00e-23 97.40
IUUC-Ppa-095801 Physcomitrella patens 65.66 2.00e-26 109.00
IUUC-Pfo-097192 Poecilia formosa 60.00 1.00e-28 117.00
IUUC-Pab-098203 Pongo abelii 54.55 7.00e-22 94.70
IUUC-Pca-100507 Procavia capensis 56.58 2.00e-20 89.40
IUUC-Ppe-101174 Prunus persica 80.81 8.00e-44 167.00
IUUC-Pva-102735 Pteropus vampyrus 55.56 1.00e-25 107.00
IUUC-Pgr-103510 Puccinia graminis 34.91 9.00e-08 48.10
IUUC-Ptt-103918 Puccinia triticina 34.95 1.00e-08 51.20
IUUC-Pte-104173 Pyrenophora teres 39.39 1.00e-16 77.80
IUUC-Pyt-104806 Pyrenophora triticirepentis 40.40 4.00e-17 79.00
IUUC-Rno-105820 Rattus norvegicus 57.89 3.00e-28 115.00
IUUC-Sce-106366 Saccharomyces cerevisiae 36.63 5.00e-16 75.10
IUUC-Sja-107727 Schizosaccharomyces japonicus 41.58 2.00e-13 67.00
IUUC-Spo-108074 Schizosaccharomyces pombe 39.22 1.00e-09 53.90
IUUC-Smo-108944 Selaginella moellendorffii 62.64 7.00e-28 114.00
IUUC-Sit-110277 Setaria italica 72.62 2.00e-30 122.00
IUUC-Sly-111505 Solanum lycopersicum 76.47 1.00e-33 133.00
IUUC-Stu-112076 Solanum tuberosum 76.47 6.00e-34 134.00
IUUC-Sbi-114274 Sorghum bicolor 65.26 1.00e-29 120.00
IUUC-Sre-114953 Sporisorium reilianum 47.06 1.00e-19 87.40
IUUC-Ssc-115418 Sus scrofa 54.55 2.00e-28 116.00
IUUC-Tgu-117311 Taeniopygia guttata 53.76 6.00e-25 104.00
IUUC-Tru-118598 Takifugu rubripes 57.14 1.00e-25 107.00
IUUC-Tni-120109 Tetraodon nigroviridis 56.25 3.00e-25 105.00
IUUC-Tca-120942 Theobroma cacao 77.11 3.00e-33 132.00
IUUC-Tre-122099 Trichoderma reesei 38.71 1.00e-10 57.00
IUUC-Tvi-122285 Trichoderma virens 38.61 1.00e-12 64.30
IUUC-Tae-125193 Triticum aestivum 74.70 1.00e-32 130.00
IUUC-Tur-126677 Triticum urartu 66.32 3.00e-30 122.00
IUUC-Tme-127120 Tuber melanosporum 37.62 5.00e-16 75.50
IUUC-Tbe-128050 Tupaia belangeri 41.41 1.00e-14 70.50
IUUC-Ttr-129019 Tursiops truncatus 54.55 2.00e-28 115.00
IUUC-Uma-129483 Ustilago maydis 47.06 1.00e-19 87.00
IUUC-Vda-129690 Verticillium dahliae 31.25 5.00e-09 52.40
IUUC-Vvi-131174 Vitis vinifera 84.34 3.00e-36 142.00
IUUC-Xma-133862 Xiphophorus maculatus 60.00 1.00e-28 117.00
IUUC-Yli-134398 Yarrowia lipolytica 44.44 5.00e-19 85.10
IUUC-Zma-134964 Zea mays 71.76 5.00e-30 121.00
Created Date 25-Jun-2017

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