iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Rno-104903

Ensembl Protein ID

ENSRNOP00000023678.7

UniProt Accession

F1M6V0; F1M6V0_RAT

Genbank Protein ID

ENSRNOP00000023678

Protein Name

Neurobeachin-like 1

Genbank Nucleotide ID

AABR07067831

Gene Name

Nbeal1; RGD1311357

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000021525.6	ENSRNOT00000023678.7	ENSRNOP00000023678.7

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
ArrayExpress
DNA & RNA Element
RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-07	32.3	2436	2469

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtl.lvsGsdDgtikvWDlrtg 33
           H d vtcla    + + l+sGs+D t+++W ++++
   Q: 2436 HIDIVTCLATdyCG-IhLISGSRDTTCMIWQITQQ 2469
           88999999874322.249************98765 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MAARERLFEL WMLYCTKKDP DYLRLWLDNF VLSYEQFLDV DFEKLPTRVD DMPPGISLLP 60
DNILQVLRIQ LLHCVQKTAD GLEEQQQALS ILLVKFFIIL CRNLSNVEEI GTCSYINHVI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGCCA GAGAGAGGCT CTTTGAACTT TGGATGCTTT ATTGTACAAA GGTAATTTAC 60
TTTCCTTTTT ATTTCTGTAC TTAAAAATAC TCGCTTATAA AACTTTGTGT CCAGCATTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000409--BEACH_dom
IPR013320--ConA-like_dom
IPR031570--DUF4704
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50197--BEACH
PS51783--PH_BEACH
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02138--Beach
PF15787--DUF4704
PF14844--PH_BEACH
PF00400--WD40

SMART

SM01026--Beach
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001205	Ailuropoda melanoleuca	84.20	0.00e+00	4509.00
IUUC-Apl-004130	Anas platyrhynchos	71.55	0.00e+00	3667.00
IUUC-Aca-005335	Anolis carolinensis	72.21	0.00e+00	3929.00
IUUC-Ath-006607	Arabidopsis thaliana	33.13	6.00e-129	457.00
IUUC-Ame-011863	Astyanax mexicanus	60.31	0.00e+00	2610.00
IUUC-Bta-013018	Bos taurus	83.87	0.00e+00	4510.00
IUUC-Bdi-014211	Brachypodium distachyon	35.96	1.00e-127	452.00
IUUC-Bol-016214	Brassica oleracea	33.33	5.00e-130	460.00
IUUC-Bra-017047	Brassica rapa	32.68	7.00e-136	479.00
IUUC-Cja-019409	Callithrix jacchus	79.85	0.00e+00	3863.00
IUUC-Cfa-021045	Canis familiaris	83.98	0.00e+00	4441.00
IUUC-Cpo-021291	Cavia porcellus	84.92	0.00e+00	2405.00
IUUC-Csa-023251	Chlorocebus sabaeus	84.20	0.00e+00	4551.00
IUUC-Cho-024721	Choloepus hoffmanni	80.36	0.00e+00	1216.00
IUUC-Csv-026337	Ciona savignyi	48.88	0.00e+00	843.00
IUUC-Dre-027616	Danio rerio	61.81	0.00e+00	3197.00
IUUC-Dno-029573	Dasypus novemcinctus	80.83	0.00e+00	3196.00
IUUC-Ete-032803	Echinops telfairi	80.62	0.00e+00	1372.00
IUUC-Eca-034151	Equus caballus	77.09	0.00e+00	3629.00
IUUC-Eeu-034829	Erinaceus europaeus	61.52	0.00e+00	628.00
IUUC-Fca-036558	Felis catus	78.75	0.00e+00	4211.00
IUUC-Fal-037518	Ficedula albicollis	73.08	0.00e+00	3893.00
IUUC-Gga-041228	Gallus gallus	73.27	0.00e+00	3907.00
IUUC-Gac-042518	Gasterosteus aculeatus	61.16	0.00e+00	3201.00
IUUC-Ggo-045255	Gorilla gorilla	88.73	0.00e+00	1734.00
IUUC-Hsa-046316	Homo sapiens	85.14	0.00e+00	4562.00
IUUC-Lch-049963	Latimeria chalumnae	68.24	0.00e+00	3692.00
IUUC-Mcc-054720	Macaca mulatta	85.21	0.00e+00	4547.00
IUUC-Mga-060173	Meleagris gallopavo	65.24	0.00e+00	3308.00
IUUC-Mmr-061257	Microcebus murinus	83.50	0.00e+00	4438.00
IUUC-Mdo-062583	Monodelphis domestica	76.05	0.00e+00	4044.00
IUUC-Mmu-063641	Mus musculus	91.68	0.00e+00	4981.00
IUUC-Mpu-066823	Mustela putorius furo	83.24	0.00e+00	4488.00
IUUC-Mlu-067759	Myotis lucifugus	80.99	0.00e+00	4281.00
IUUC-Nle-069582	Nomascus leucogenys	85.17	0.00e+00	4564.00
IUUC-Ont-071396	Oreochromis niloticus	60.42	0.00e+00	3141.00
IUUC-Oan-073440	Ornithorhynchus anatinus	75.08	7.00e-140	489.00
IUUC-Ocu-074036	Oryctolagus cuniculus	86.97	0.00e+00	2547.00
IUUC-Oin-079301	Oryza indica	35.64	5.00e-127	450.00
IUUC-Osa-085645	Oryza sativa	32.65	9.00e-33	133.00
IUUC-Oga-088899	Otolemur garnettii	80.73	0.00e+00	4290.00
IUUC-Oar-090283	Ovis aries	83.42	0.00e+00	4526.00
IUUC-Psi-093570	Pelodiscus sinensis	72.57	0.00e+00	2835.00
IUUC-Ppa-095295	Physcomitrella patens	33.91	4.00e-143	504.00
IUUC-Pfo-096377	Poecilia formosa	60.56	0.00e+00	3227.00
IUUC-Pab-098101	Pongo abelii	88.57	0.00e+00	3071.00
IUUC-Pva-102558	Pteropus vampyrus	90.83	0.00e+00	1506.00
IUUC-Sar-113411	Sorex araneus	84.00	0.00e+00	1632.00
IUUC-Sbi-113954	Sorghum bicolor	50.25	2.00e-110	394.00
IUUC-Tru-118125	Takifugu rubripes	60.83	0.00e+00	3233.00
IUUC-Tsy-119218	Tarsius syrichta	85.81	0.00e+00	1764.00
IUUC-Tae-124085	Triticum aestivum	34.97	1.00e-123	437.00
IUUC-Tbe-127556	Tupaia belangeri	80.85	0.00e+00	1415.00
IUUC-Ttr-128941	Tursiops truncatus	85.82	0.00e+00	2474.00
IUUC-Vpa-130417	Vicugna pacos	82.70	0.00e+00	1699.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence