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Tag Content
iUUCD ID IUUC-Bra-016634
Ensembl Protein ID Bra020400.1-P
UniProt Accession M4DV57; M4DV57_BRARP
Protein Name Uncharacterized protein
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra020400 Bra020400.1 Bra020400.1-P
Status Unreviewed
Classification
Family E-Value Score Start End
DUB/USP 1.80e-80 271.7 48 349
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEfl 96
    Gl+NlgNtC++NSv+QcL+ +++l+ +l + + ++++ + l+++qk ++ ++ + k v+p+ l++ l+ ++++f++ +q+Da+E++
   Q: 48 GLENLGNTCFLNSVVQCLTYTEPLAAYLQDvGHGRRCHM-----AGFCALCAMQKHVRLALQASGKIVAPKYLVSNLRCVSRNFRNCRQEDAHEYM 138
    9*****************************544455543.....456999********************************************** PP
   S: 97 aflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLe 192
    ll+ +++ + s +e+ + +sl++++F+g+l+s++kc +c + s +++pfldlsl++++ + slq +L+
   Q: 139 INLLECMHRCC-----------------LPSGVPSESSDAYRSSLVHKIFGGSLRSRVKCAQCSHCSDKFDPFLDLSLDISKAD-----SLQRALS 212
    ***********.................122334557788899*****************************************.....9****** PP
   S: 193 sftkeeelegenk.yycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHs 287
    ft+ e l++ k y+ce+ck+k++aek+++++k P vL++hLkRf e +++eki+kkv+f +d++pf++ p + + kY L++v+vH+
   Q: 213 RFTAVELLDDGAKiYQCERCKQKVRAEKQMTVSKAPYVLTVHLKRF----EAHRSEKIDKKVQFASAVDMKPFVSGPYAG---NLKYTLYGVLVHY 301
    ********9888779*******************************....447789********************9988...79*********** PP
   S: 288 G.slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
    G s++sGHY ++v+ ++g W+ +dD++V++v+e++v + ++aY+lfY r
   Q: 302 GrSSHSGHYACFVRTSSGMWYSLDDNRVSKVSEKTVFN---QKAYMLFYVR 349
    **************************************...********87 PP
   

Organism Brassica rapa
Protein Sequence
(Fasta)
METLNPSSAN KRAFSSPSSK RSDGSDPLEH GLDRELTFNR TIRKIGAGLE NLGNTCFLNS 60
VVQCLTYTEP LAAYLQDVGH GRRCHMAGFC ALCAMQKHVR LALQASGKIV APKYLVSNLR 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Bra-016634|DUB,USP|Brassica rapa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGAGACTT TGAATCCCTC CTCAGCTAAC AAGCGAGCTT TCTCCTCTCC CTCATCTAAA 60
AGGTCTGATG GGTCTGATCC GTTGGAACAT GGGTTGGATC GGGAGCTTAC TTTTAACAGA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Bra-016634|DUB,USP|Brassica rapa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002092 Ailuropoda melanoleuca 44.90 2.00e-75 277.00
IUUC-Aca-004440 Anolis carolinensis 45.45 1.00e-86 315.00
IUUC-Ath-006710 Arabidopsis thaliana 60.77 0.00e+00 953.00
IUUC-Ago-007836 Ashbya gossypii 27.88 1.00e-34 141.00
IUUC-Ame-011358 Astyanax mexicanus 45.54 6.00e-85 308.00
IUUC-Bta-013047 Bos taurus 45.54 1.00e-82 301.00
IUUC-Bol-015996 Brassica oleracea 84.13 0.00e+00 1392.00
IUUC-Cja-019203 Callithrix jacchus 44.27 7.00e-82 298.00
IUUC-Cfa-020597 Canis familiaris 43.31 9.00e-82 298.00
IUUC-Cpo-021804 Cavia porcellus 44.27 1.00e-75 277.00
IUUC-Cre-022988 Chlamydomonas reinhardtii 45.33 2.00e-54 205.00
IUUC-Csa-023485 Chlorocebus sabaeus 43.31 3.00e-82 300.00
IUUC-Cho-024575 Choloepus hoffmanni 38.87 2.00e-56 214.00
IUUC-Cne-027049 Cryptococcus neoformans 33.87 4.00e-38 152.00
IUUC-Cme-027339 Cyanidioschyzon merolae 41.37 2.00e-61 229.00
IUUC-Dre-028442 Danio rerio 45.54 7.00e-84 305.00
IUUC-Dor-030836 Dipodomys ordii 36.94 2.00e-59 224.00
IUUC-Ete-033088 Echinops telfairi 39.62 3.00e-73 270.00
IUUC-Fca-035792 Felis catus 43.31 2.00e-81 297.00
IUUC-Gmo-039033 Gadus morhua 43.84 5.00e-83 302.00
IUUC-Ggo-045437 Gorilla gorilla 44.27 8.00e-76 278.00
IUUC-Hsa-046072 Homo sapiens 43.31 4.00e-82 300.00
IUUC-Hvu-047306 Hordeum vulgare 68.24 2.00e-102 364.00
IUUC-Itr-048655 Ictidomys tridecemlineatus 44.90 7.00e-83 302.00
IUUC-Lch-049867 Latimeria chalumnae 44.81 5.00e-84 306.00
IUUC-Loc-052621 Lepisosteus oculatus 44.59 6.00e-82 299.00
IUUC-Laf-054330 Loxodonta africana 43.04 5.00e-83 301.00
IUUC-Mcc-055762 Macaca mulatta 44.27 5.00e-82 299.00
IUUC-Meu-056697 Macropus eugenii 44.51 2.00e-76 280.00
IUUC-Mla-059049 Melampsora laricipopulina 37.54 6.00e-53 202.00
IUUC-Mvi-060547 Microbotryum violaceum 38.95 5.00e-69 255.00
IUUC-Mdo-062733 Monodelphis domestica 45.13 2.00e-76 281.00
IUUC-Mmu-064331 Mus musculus 44.90 1.00e-76 281.00
IUUC-Mpu-065822 Mustela putorius furo 43.31 7.00e-82 299.00
IUUC-Mlu-067091 Myotis lucifugus 43.31 4.00e-82 300.00
IUUC-Nle-069004 Nomascus leucogenys 43.31 2.00e-82 300.00
IUUC-Opr-070729 Ochotona princeps 39.49 9.00e-70 258.00
IUUC-Oan-073711 Ornithorhynchus anatinus 44.27 7.00e-82 299.00
IUUC-Ocu-074596 Oryctolagus cuniculus 43.32 2.00e-81 296.00
IUUC-Oar-089410 Ovis aries 45.37 4.00e-82 299.00
IUUC-Ptr-091445 Pan troglodytes 43.31 3.00e-82 300.00
IUUC-Pan-092484 Papio anubis 43.31 4.00e-82 300.00
IUUC-Psi-093277 Pelodiscus sinensis 41.71 2.00e-84 307.00
IUUC-Pab-098724 Pongo abelii 44.27 5.00e-82 299.00
IUUC-Pop-099067 Populus trichocarpa 43.38 2.00e-166 579.00
IUUC-Pva-103238 Pteropus vampyrus 38.22 8.00e-70 259.00
IUUC-Rno-105068 Rattus norvegicus 43.65 3.00e-83 303.00
IUUC-Sar-113340 Sorex araneus 43.31 1.00e-81 298.00
IUUC-Sre-114924 Sporisorium reilianum 42.25 1.00e-66 248.00
IUUC-Ssc-116022 Sus scrofa 45.86 3.00e-76 280.00
IUUC-Tsy-118974 Tarsius syrichta 43.63 1.00e-82 301.00
IUUC-Tni-120064 Tetraodon nigroviridis 45.54 2.00e-84 307.00
IUUC-Ttr-129259 Tursiops truncatus 40.45 6.00e-60 226.00
IUUC-Uma-129416 Ustilago maydis 41.94 2.00e-67 249.00
Created Date 25-Jun-2017

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