iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gma-043941

Ensembl Protein ID

GLYMA19G34071.1

UniProt Accession

K7MYL5; K7MYL5_SOYBN

Protein Name

tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; WD repeat-containing protein 4 homolog

Gene Name

LOC100786310

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA19G34071	GLYMA19G34071.1	GLYMA19G34071.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.40e-18	65.7	192	233

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf......sdtllvsGsdDgtikvWDlrtgvll 36
           gHt+ v+claf      + +ll+sGs+D t+++W++++g ll
   Q: 192  GHTEFVSCLAFiqaqecPQGLLLSGSGDSTVRLWNIDSGALL 233
           8*************99766****************9999776 PP

Organism

Glycine max

Functional Description
(View)

Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit.

Protein Sequence
(Fasta)

MSMESESKND TEVAPALIAV HPDQSSVAVA VGPHLRVFDL LSGSAASLTD DSDCAPLHKN 60
NIRAIRFGAK GKLFVSAGDD KTVKVWSTQS WRCITTVSSE KRVTAVAISN DGTFVCFADK 120

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Nucleotide Sequence
(Fasta)

GTTTTTGAGT TTTTGGGGTC AGAAGAATTA GTGTATGAGA AGCGGCAAAT CCTAAGACGG 60
AGGTTAGTTT CTGAGTGGCA GCATGAGCAT GGAATCCGAA TCCAAGAACG ACACCGAAGT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0819--tRNA processing
KW-0853--WD repeat

Interpro

IPR028884--Trm82
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0043527--C:tRNA methyltransferase complex
GO:0036265--P:RNA (guanine-N7)-methylation
GO:0030488--P:tRNA methylation

KEGG

gmx:100786310

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bgr-012067	Blumeria graminis	33.94	1.00e-10	61.20
IUUC-Csa-024148	Chlorocebus sabaeus	36.23	9.00e-17	81.30
IUUC-Dor-030522	Dipodomys ordii	28.39	3.00e-23	102.00
IUUC-Ggo-045340	Gorilla gorilla	35.02	1.00e-15	77.40
IUUC-Hsa-046403	Homo sapiens	35.48	5.00e-17	82.00
IUUC-Mcc-054747	Macaca mulatta	36.23	1.00e-16	80.90
IUUC-Nle-069914	Nomascus leucogenys	34.78	3.00e-13	69.30
IUUC-Ptr-090851	Pan troglodytes	35.02	1.00e-15	77.40
IUUC-Pan-092558	Papio anubis	36.23	1.00e-16	81.30
IUUC-Pab-097722	Pongo abelii	35.75	1.00e-16	80.90
IUUC-Pca-100753	Procavia capensis	47.87	4.00e-15	75.90

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence