iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Kpa-049283

Ensembl Protein ID

CAY67390

UniProt Accession

C4QVW7; C4QVW7_KOMPG

Genbank Protein ID

CAY67390.1

Protein Name

tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82; Transfer RNA methyltransferase 82

Genbank Nucleotide ID

FN392319

Gene Name

TRM82; PAS_chr1-1_0467

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PAS_chr1-1_0467	CAY67390	CAY67390

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-06	25.8	222	260

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgvll 36
           gH+  v+cl++   ++++l+sG++D  i +W+++tg+ll
   Q: 222  GHSQFVSCLKLcpwNEDILISGGGDDFINIWNWTTGDLL 260
           79999***98887677********************986 PP

Organism

Komagataella pastoris

Functional Description
(View)

Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit.

Protein Sequence
(Fasta)

MKHPFQLILA NREGSLLFAS TKNVVQVFST ENGQLIAKWI DPIDTFHTLK KQQKEKIQAL 60
KEKTEGPVKI PKIPVPGKGA PPIFNYIRNM HLTGDESKLI VTTDSDKAVV ILELNLDNSD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGCATC CTTTCCAATT GATATTGGCC AATAGAGAAG GATCACTACT ATTTGCGTCT 60
ACCAAGAATG TGGTGCAAGT TTTTTCTACG GAGAATGGGC AACTCATTGC GAAATGGATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0819--tRNA processing
KW-0853--WD repeat

Interpro

IPR028884--Trm82
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0043527--C:tRNA methyltransferase complex
GO:0008176--F:tRNA (guanine-N7-)-methyltransferase activity

KEGG

ppa:PAS_chr1-1_0467

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002431	Amborella trichopoda	35.48	4.00e-06	42.00
IUUC-Apl-003975	Anas platyrhynchos	30.30	2.00e-19	88.20
IUUC-Aca-005170	Anolis carolinensis	28.00	3.00e-12	64.30
IUUC-Aly-005769	Arabidopsis lyrata	31.48	1.00e-16	78.60
IUUC-Ath-006733	Arabidopsis thaliana	34.06	3.00e-16	77.40
IUUC-Acl-008151	Aspergillus clavatus	23.62	3.00e-33	134.00
IUUC-Afl-008518	Aspergillus flavus	34.04	1.00e-26	111.00
IUUC-Afu-009102	Aspergillus fumigatus	25.84	1.00e-29	122.00
IUUC-Ani-009442	Aspergillus nidulans	26.13	1.00e-28	118.00
IUUC-Aor-010133	Aspergillus oryzae	30.28	6.00e-33	133.00
IUUC-Ate-010465	Aspergillus terreus	24.30	3.00e-29	120.00
IUUC-Ame-010613	Astyanax mexicanus	27.97	2.00e-18	84.30
IUUC-Bgr-012067	Blumeria graminis	31.49	4.00e-31	127.00
IUUC-Bta-012788	Bos taurus	31.03	1.00e-18	85.10
IUUC-Bdi-014458	Brachypodium distachyon	36.11	3.00e-10	57.40
IUUC-Bol-015373	Brassica oleracea	28.57	1.00e-16	80.10
IUUC-Bra-017059	Brassica rapa	31.41	1.00e-17	82.00
IUUC-Cpo-021963	Cavia porcellus	33.99	1.00e-20	92.00
IUUC-Csa-024148	Chlorocebus sabaeus	34.59	4.00e-14	70.10
IUUC-Cne-026834	Cryptococcus neoformans	37.16	6.00e-27	113.00
IUUC-Dre-028427	Danio rerio	33.53	3.00e-20	90.50
IUUC-Dno-028881	Dasypus novemcinctus	28.48	9.00e-10	55.80
IUUC-Dor-030522	Dipodomys ordii	31.12	1.00e-21	95.10
IUUC-Dme-032136	Drosophila melanogaster	37.06	6.00e-20	89.70
IUUC-Fca-035833	Felis catus	30.35	6.00e-21	92.80
IUUC-Fal-037497	Ficedula albicollis	30.81	7.00e-18	82.80
IUUC-Gga-040547	Gallus gallus	35.92	2.00e-19	87.80
IUUC-Gac-041761	Gasterosteus aculeatus	31.58	3.00e-16	77.00
IUUC-Gma-043722	Glycine max	32.82	5.00e-14	70.10
IUUC-Ggo-045340	Gorilla gorilla	34.59	3.00e-14	70.50
IUUC-Hsa-046403	Homo sapiens	33.96	4.00e-14	70.50
IUUC-Hvu-047643	Hordeum vulgare	35.19	1.00e-08	52.00
IUUC-Itr-048103	Ictidomys tridecemlineatus	33.33	1.00e-19	88.20
IUUC-Lch-050682	Latimeria chalumnae	26.61	8.00e-22	95.90
IUUC-Lpe-050712	Leersia perrieri	34.64	4.00e-18	83.60
IUUC-Loc-052599	Lepisosteus oculatus	37.59	4.00e-20	90.10
IUUC-Laf-054390	Loxodonta africana	30.09	5.00e-20	89.70
IUUC-Mcc-054747	Macaca mulatta	33.96	1.00e-13	68.90
IUUC-Mtr-058600	Medicago truncatula	32.24	3.00e-19	87.00
IUUC-Mla-059129	Melampsora laricipopulina	30.61	1.00e-22	97.80
IUUC-Mga-059876	Meleagris gallopavo	35.66	3.00e-19	87.00
IUUC-Mvi-060359	Microbotryum violaceum	34.32	2.00e-21	94.70
IUUC-Mmr-061518	Microcebus murinus	30.54	5.00e-20	89.70
IUUC-Mac-065625	Musa acuminata	29.86	3.00e-15	74.30
IUUC-Nfi-068402	Neosartorya fischeri	24.40	5.00e-27	113.00
IUUC-Nle-069914	Nomascus leucogenys	35.71	4.00e-12	63.50
IUUC-Ont-071555	Oreochromis niloticus	32.16	4.00e-18	83.60
IUUC-Oan-072951	Ornithorhynchus anatinus	34.69	1.00e-19	89.00
IUUC-Ocu-074679	Oryctolagus cuniculus	31.37	7.00e-13	66.20
IUUC-Obr-076769	Oryza brachyantha	34.78	2.00e-16	78.20
IUUC-Ogl-077168	Oryza glaberrima	35.04	6.00e-16	76.60
IUUC-Oin-079207	Oryza indica	35.04	6.00e-16	76.60
IUUC-Opu-084031	Oryza punctata	35.77	5.00e-16	77.00
IUUC-Osa-085327	Oryza sativa	35.04	6.00e-16	76.60
IUUC-Ola-086716	Oryzias latipes	33.71	1.00e-19	88.60
IUUC-Olu-087708	Ostreococcus lucimarinus	25.62	3.00e-10	57.40
IUUC-Oar-090239	Ovis aries	31.03	2.00e-18	84.30
IUUC-Ptr-090851	Pan troglodytes	34.59	3.00e-14	70.50
IUUC-Pan-092558	Papio anubis	34.59	4.00e-14	70.10
IUUC-Psi-093792	Pelodiscus sinensis	28.43	2.00e-16	77.80
IUUC-Ppa-095757	Physcomitrella patens	33.57	4.00e-10	57.00
IUUC-Pfo-096465	Poecilia formosa	31.49	4.00e-20	90.50
IUUC-Pab-097722	Pongo abelii	35.22	5.00e-15	73.20
IUUC-Pop-098979	Populus trichocarpa	31.41	1.00e-15	75.10
IUUC-Pca-100753	Procavia capensis	35.59	2.00e-15	74.30
IUUC-Ppe-101515	Prunus persica	31.25	2.00e-15	74.70
IUUC-Sja-107780	Schizosaccharomyces japonicus	27.59	5.00e-21	93.20
IUUC-Spo-108251	Schizosaccharomyces pombe	34.58	2.00e-21	95.10
IUUC-Smo-108938	Selaginella moellendorffii	31.68	4.00e-16	77.00
IUUC-Sit-110020	Setaria italica	38.85	4.00e-17	80.50
IUUC-Sly-111543	Solanum lycopersicum	34.47	9.00e-19	85.90
IUUC-Stu-111925	Solanum tuberosum	33.82	2.00e-18	84.30
IUUC-Sbi-114061	Sorghum bicolor	38.13	2.00e-17	81.30
IUUC-Tgu-117321	Taeniopygia guttata	35.86	4.00e-15	73.20
IUUC-Tru-118454	Takifugu rubripes	33.71	2.00e-20	90.90
IUUC-Tni-119894	Tetraodon nigroviridis	33.33	4.00e-20	89.70
IUUC-Tca-121746	Theobroma cacao	31.58	2.00e-15	74.70
IUUC-Tbe-127683	Tupaia belangeri	36.84	3.00e-10	57.40
IUUC-Ttr-129056	Tursiops truncatus	33.33	2.00e-18	84.70
IUUC-Vvi-131428	Vitis vinifera	34.07	7.00e-18	82.80
IUUC-Xma-133605	Xiphophorus maculatus	31.49	2.00e-18	84.70

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence