iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Sce-106144

Ensembl Protein ID

YHL038C

UniProt Accession

P03874; D3DKT1; CBP2_YEAST

Genbank Protein ID

AAA63570.1; AAB65050.1; DAA06648.1

Protein Name

Cytochrome B pre-mRNA-processing protein 2

Genbank Nucleotide ID

K00138; U11583; BK006934

Gene Name

CBP2; YHL038C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
YHL038C	YHL038C	YHL038C

Annotation

mRNA Expression
GEO	FFGED
Protein-protein Interaction
IID	HINT	Mentha
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	26.09	8.60e-01	33.50	IUUC-Hsa-046348

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Saccharomyces cerevisiae

Functional Description
(View)

Present with 1360 molecules/cell in log phase SD medium.

Protein Sequence
(Fasta)

MVNWQTLFMV SLRRQGSSSR YRYKFNMENI THQVFPRCKQ AFKKTNLSYE YCDLEGVLYN 60
ISLTDLQKLL LRDINAPREH AFKIVRTDLT QKSSKKRIQH WERIAPMFDH PLSLYEKLFS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGAATT GGCAAACATT GTTCATGGTC TCATTGAGGA GACAGGGCAG TTCCTCTCGT 60
TACAGGTATA AGTTCAACAT GGAGAATATC ACACATCAGG TGTTCCCTCG CTGTAAGCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0496--Mitochondrion
KW-0507--mRNA processing
KW-0508--mRNA splicing
KW-1185--Reference proteome

Interpro

IPR016424--Cbp2

Gene Ontology

GO:0005739--C:mitochondrion
GO:0003723--F:RNA binding
GO:0000372--P:Group I intron splicing
GO:0006397--P:mRNA processing

KEGG

sce:YHL038C

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000166	Aegilops tauschii	25.00	4.50e-01	28.50
IUUC-Csa-023971	Chlorocebus sabaeus	26.37	7.00e-03	33.50
IUUC-Ete-032325	Echinops telfairi	26.67	5.00e-01	27.30
IUUC-Ggo-044544	Gorilla gorilla	26.37	4.00e-03	34.30
IUUC-Hsa-046348	Homo sapiens	26.37	5.00e-03	33.90
IUUC-Loc-052477	Lepisosteus oculatus	25.56	1.10e+00	27.70
IUUC-Nle-069189	Nomascus leucogenys	25.27	1.20e-02	32.70
IUUC-Oga-088696	Otolemur garnettii	34.69	2.90e-02	30.80
IUUC-Ptr-091253	Pan troglodytes	25.27	2.90e-02	31.20
IUUC-Pan-092709	Papio anubis	26.37	3.00e-03	34.70

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence