iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121712

Ensembl Protein ID

EOY06438

UniProt Accession

A0A061EP54; A0A061EP54_THECC

Genbank Protein ID

EOY06438.1

Protein Name

RING/U-box superfamily protein, putative isoform 1

Genbank Nucleotide ID

CM001882

Gene Name

TCM_021158

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_021158	EOY06439	EOY06439
TCM_021158	EOY06440	EOY06440
TCM_021158	EOY06438	EOY06438

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.90e-07	32.4	32	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl  +       +++ C H++++ C+ kw      s  + +CPlC+
   Q: 32   CPICLRNLdvrGA-AVLTVCSHAYCLGCIRKW------SDLKRKCPLCN 73
           ******9965433.66799*************......**********7 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MDSPSSAKRS EKSRIEKFVR RVISPAVVGK TCPICLRNLD VRGAAVLTVC SHAYCLGCIR 60
KWSDLKRKCP LCNSTFDSWF YKIDLSSRKF FKEQVPALSE GKPVIHRPRS TLIDRRREDI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTTCTCCAA TGGATTCACC GTCTTCAGCA AAACGATCGG AGAAATCGAG AATCGAGAAA 60
TTCGTGCGGA GAGTAATATC GCCGGCAGTC GTCGGCAAAA CGTGTCCGAT ATGCTTGAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002240	Ailuropoda melanoleuca	27.38	1.00e-16	81.30
IUUC-Aca-004984	Anolis carolinensis	29.85	2.00e-15	74.70
IUUC-Aly-005524	Arabidopsis lyrata	43.43	2.00e-38	151.00
IUUC-Ath-007668	Arabidopsis thaliana	51.03	1.00e-66	245.00
IUUC-Bta-012637	Bos taurus	27.39	8.00e-17	82.40
IUUC-Bol-015115	Brassica oleracea	48.68	6.00e-64	236.00
IUUC-Bra-017451	Brassica rapa	52.32	6.00e-39	153.00
IUUC-Cja-019105	Callithrix jacchus	26.58	2.00e-16	80.90
IUUC-Cfa-021203	Canis familiaris	27.38	1.00e-16	81.30
IUUC-Cpo-022335	Cavia porcellus	25.87	2.00e-15	77.40
IUUC-Csa-023870	Chlorocebus sabaeus	27.22	8.00e-16	79.00
IUUC-Cho-024870	Choloepus hoffmanni	27.73	2.00e-17	84.30
IUUC-Cne-026788	Cryptococcus neoformans	38.78	1.00e-06	48.10
IUUC-Dre-027535	Danio rerio	26.40	2.00e-17	84.00
IUUC-Dno-028963	Dasypus novemcinctus	27.39	3.00e-16	80.10
IUUC-Dor-030239	Dipodomys ordii	25.52	3.00e-14	73.20
IUUC-Dme-031941	Drosophila melanogaster	24.57	7.00e-12	65.90
IUUC-Ete-032300	Echinops telfairi	26.60	4.00e-18	86.30
IUUC-Eca-033690	Equus caballus	28.08	4.00e-17	83.20
IUUC-Eeu-035257	Erinaceus europaeus	27.39	1.00e-15	78.20
IUUC-Fca-036383	Felis catus	26.54	5.00e-16	79.70
IUUC-Fal-037209	Ficedula albicollis	27.46	1.00e-15	78.20
IUUC-Gga-041267	Gallus gallus	26.52	4.00e-16	80.10
IUUC-Gac-042227	Gasterosteus aculeatus	26.43	1.00e-17	84.00
IUUC-Ggo-044445	Gorilla gorilla	27.22	8.00e-16	79.00
IUUC-Hsa-045844	Homo sapiens	27.22	9.00e-16	78.60
IUUC-Itr-048818	Ictidomys tridecemlineatus	27.85	1.00e-16	81.30
IUUC-Lch-050031	Latimeria chalumnae	26.03	8.00e-14	72.00
IUUC-Loc-052944	Lepisosteus oculatus	27.01	4.00e-14	72.80
IUUC-Laf-053820	Loxodonta africana	27.62	2.00e-18	87.00
IUUC-Mcc-054800	Macaca mulatta	27.22	8.00e-16	79.00
IUUC-Meu-056806	Macropus eugenii	25.95	9.00e-16	77.80
IUUC-Mvi-060417	Microbotryum violaceum	24.83	2.00e-08	53.50
IUUC-Mmr-061481	Microcebus murinus	26.33	9.00e-17	82.00
IUUC-Mdo-062219	Monodelphis domestica	34.41	1.00e-07	51.60
IUUC-Mmu-064138	Mus musculus	26.81	1.00e-15	78.20
IUUC-Mlu-067088	Myotis lucifugus	27.07	2.00e-16	80.50
IUUC-Nle-069862	Nomascus leucogenys	27.22	1.00e-15	78.60
IUUC-Opr-071076	Ochotona princeps	25.78	1.00e-15	78.60
IUUC-Ont-072225	Oreochromis niloticus	26.60	9.00e-16	78.20
IUUC-Oan-073069	Ornithorhynchus anatinus	29.33	3.00e-20	92.00
IUUC-Ocu-074826	Oryctolagus cuniculus	26.81	4.00e-16	79.70
IUUC-Ola-087377	Oryzias latipes	28.01	4.00e-15	75.10
IUUC-Oga-088059	Otolemur garnettii	26.18	2.00e-16	80.90
IUUC-Oar-089592	Ovis aries	27.53	9.00e-17	82.00
IUUC-Ptr-091233	Pan troglodytes	26.90	1.00e-15	78.20
IUUC-Pan-092743	Papio anubis	27.22	8.00e-16	79.00
IUUC-Psi-093669	Pelodiscus sinensis	27.13	1.00e-17	84.70
IUUC-Ppa-095668	Physcomitrella patens	29.61	1.00e-29	123.00
IUUC-Pop-099119	Populus trichocarpa	52.41	1.00e-76	278.00
IUUC-Pca-100967	Procavia capensis	26.90	1.00e-17	84.30
IUUC-Ppe-101922	Prunus persica	50.96	1.00e-63	235.00
IUUC-Pva-102982	Pteropus vampyrus	26.85	7.00e-17	82.40
IUUC-Pgr-103551	Puccinia graminis	22.06	2.00e-08	52.40
IUUC-Rno-105730	Rattus norvegicus	26.81	2.00e-15	77.40
IUUC-Sha-106588	Sarcophilus harrisii	36.49	2.00e-08	54.30
IUUC-Smo-109039	Selaginella moellendorffii	31.37	2.00e-34	139.00
IUUC-Sar-113622	Sorex araneus	32.26	2.00e-06	47.80
IUUC-Sre-115041	Sporisorium reilianum	44.00	6.00e-05	40.80
IUUC-Ssc-115244	Sus scrofa	26.75	9.00e-16	78.60
IUUC-Tgu-117180	Taeniopygia guttata	28.32	2.00e-18	87.00
IUUC-Tsy-119408	Tarsius syrichta	26.75	3.00e-17	83.60
IUUC-Tni-120664	Tetraodon nigroviridis	26.80	6.00e-14	72.00
IUUC-Tbe-127301	Tupaia belangeri	25.53	5.00e-12	66.20
IUUC-Ttr-128204	Tursiops truncatus	27.76	4.00e-17	83.20
IUUC-Vpa-130297	Vicugna pacos	27.39	1.00e-16	81.60
IUUC-Vvi-131157	Vitis vinifera	54.45	3.00e-83	301.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence