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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Rno-105734
Ensembl Protein ID ENSRNOP00000017557.3
UniProt Accession Q5U2Y2; Q5U2Y2_RAT
Genbank Protein ID AAH85814.1; EDL83030.1
Protein Name DNA-binding protein SATB; Special AT-rich sequence-binding protein
Genbank Nucleotide ID AABR07066098; CH474081
Gene Name Satb1; rCG_23620
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000012942.6 ENSRNOT00000077417.1 ENSRNOP00000070853.1
ENSRNOG00000012942.6 ENSRNOT00000017556.6 ENSRNOP00000017557.3
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
microRNATRANSFACRAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAFPhosphositePlus
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
ULD/UDP/UBQ/UBQ_Other 5.50e-11 42.6 76 162
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   ULD/UDP/UBQ/UBQ_Other
   S: 1    vqvtvksldgs.eltlkvnpsd.tVaeLKeki.....ekk.lgip.peqqrLiykGkiL...eddktLady.glkdgstihllekksg 75
           v+++v++++++ e+++k ++++ +V+++K+++     e++ l+++ +++++ + kG i+   +++++L+++ +++d++++++l+++++
   Q: 76   VFCVVEHYENAiEYDCK-EEHAeFVLVRKDMLfnqliEMAlLSLGySHSSAAQAKGLIQvgkWNPVPLSYVtDAPDATVADMLQDVYH 162
           689**************.77777*******99999998888*********************************************98 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MDHLNETTQG KEHSEMSNNV SDPKGPPAKI ARLEQNGSPL GRGRLGSTGG KMQGVPLKHS 60
GHLMKTNLRK GTMLPVFCVV EHYENAIEYD CKEEHAEFVL VRKDMLFNQL IEMALLSLGY 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105734|ULD,UBQ_Other|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AAACTGTGGA CGGCTACTGA GAAAAGAACT TACCAGTCAT GGATAATCAA TTATGCATGA 60
ATTCAAATGT AGCAGATGGA ATCTGGTGAG TTAAAGTTTC TCTATGCCTT AGCTTTTTTT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105734|ULD,UBQ_Other|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0238--DNA-binding
KW-0371--Homeobox
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0804--Transcription
KW-0805--Transcription regulation
Interpro

IPR003350--CUT_dom
IPR032355--CUTL
IPR009057--Homeobox-like
IPR001356--Homeobox_dom
IPR010982--Lambda_DNA-bd_dom
IPR032392--ULD
PROSITE

PS51042--CUT
PS50071--HOMEOBOX_2
Pfam

PF02376--CUT
PF16557--CUTL
PF00046--Homeobox
PF16534--ULD
SMART

SM01109--CUT
SM00389--HOX
Gene Ontology

GO:0005720--C:nuclear heterochromatin
GO:0016363--C:nuclear matrix
GO:0005634--C:nucleus
GO:0016605--C:PML body
GO:0003682--F:chromatin binding
GO:0000977--F:RNA polymerase II regulatory region sequence-specific DNA binding
GO:0043565--F:sequence-specific DNA binding
GO:0001227--F:transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding
GO:0050798--P:activated T cell proliferation
GO:0043367--P:CD4-positive, alpha-beta T cell differentiation
GO:0043374--P:CD8-positive, alpha-beta T cell differentiation
GO:0006338--P:chromatin remodeling
GO:0008544--P:epidermis development
GO:0016571--P:histone methylation
GO:0060004--P:reflex
GO:0006357--P:regulation of transcription from RNA polymerase II promoter
GO:0006351--P:transcription, DNA-templated
KEGG rno:316164
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001269 Ailuropoda melanoleuca 98.99 0.00e+00 1224.00
IUUC-Apl-003442 Anas platyrhynchos 92.82 0.00e+00 1413.00
IUUC-Aca-004969 Anolis carolinensis 90.93 0.00e+00 1394.00
IUUC-Ame-010811 Astyanax mexicanus 71.01 0.00e+00 1107.00
IUUC-Bta-012461 Bos taurus 90.65 0.00e+00 1358.00
IUUC-Cel-018701 Caenorhabditis elegans 34.00 1.00e-10 60.80
IUUC-Cja-020003 Callithrix jacchus 98.15 0.00e+00 1213.00
IUUC-Cfa-020082 Canis familiaris 98.82 0.00e+00 1219.00
IUUC-Cpo-021601 Cavia porcellus 97.91 0.00e+00 1430.00
IUUC-Csa-023306 Chlorocebus sabaeus 99.16 0.00e+00 1226.00
IUUC-Cho-025063 Choloepus hoffmanni 92.38 0.00e+00 985.00
IUUC-Dre-028396 Danio rerio 67.31 0.00e+00 1045.00
IUUC-Dno-029755 Dasypus novemcinctus 89.28 0.00e+00 1081.00
IUUC-Dor-030766 Dipodomys ordii 99.23 0.00e+00 1076.00
IUUC-Ete-032547 Echinops telfairi 90.00 1.00e-133 470.00
IUUC-Eca-033394 Equus caballus 99.16 0.00e+00 1224.00
IUUC-Eeu-034706 Erinaceus europaeus 98.66 0.00e+00 1077.00
IUUC-Fca-036482 Felis catus 90.47 0.00e+00 1337.00
IUUC-Fal-037384 Ficedula albicollis 94.37 0.00e+00 1443.00
IUUC-Fso-038109 Fusarium solani 44.74 4.00e-02 33.90
IUUC-Gmo-038956 Gadus morhua 75.64 0.00e+00 686.00
IUUC-Ggr-039906 Gaeumannomyces graminis 33.33 8.00e-04 34.70
IUUC-Gga-040653 Gallus gallus 94.37 0.00e+00 1440.00
IUUC-Gac-041928 Gasterosteus aculeatus 72.27 0.00e+00 841.00
IUUC-Ggo-044842 Gorilla gorilla 98.82 0.00e+00 1224.00
IUUC-Hsa-046800 Homo sapiens 99.16 0.00e+00 1226.00
IUUC-Lch-050515 Latimeria chalumnae 89.66 0.00e+00 1106.00
IUUC-Loc-052600 Lepisosteus oculatus 76.92 0.00e+00 1239.00
IUUC-Laf-054011 Loxodonta africana 98.99 0.00e+00 1228.00
IUUC-Mla-058991 Melampsora laricipopulina 34.15 4.50e+00 26.20
IUUC-Mga-059444 Meleagris gallopavo 94.25 0.00e+00 1413.00
IUUC-Mmr-061285 Microcebus murinus 99.16 0.00e+00 1230.00
IUUC-Mdo-062444 Monodelphis domestica 98.31 0.00e+00 1219.00
IUUC-Mmu-063758 Mus musculus 99.61 0.00e+00 1486.00
IUUC-Mpu-066758 Mustela putorius furo 98.99 0.00e+00 1227.00
IUUC-Mlu-067012 Myotis lucifugus 95.56 0.00e+00 1420.00
IUUC-Nle-069511 Nomascus leucogenys 99.16 0.00e+00 1229.00
IUUC-Opr-070880 Ochotona princeps 82.77 0.00e+00 997.00
IUUC-Ont-072450 Oreochromis niloticus 67.88 0.00e+00 1008.00
IUUC-Oan-073212 Ornithorhynchus anatinus 97.40 3.00e-87 313.00
IUUC-Ocu-074585 Oryctolagus cuniculus 99.16 0.00e+00 1228.00
IUUC-Oba-075370 Oryza barthii 36.96 1.00e-03 36.60
IUUC-Olo-080429 Oryza longistaminata 32.61 1.40e-02 34.30
IUUC-Ome-081450 Oryza meridionalis 34.78 6.00e-03 35.40
IUUC-Oni-082089 Oryza nivara 24.66 3.00e-02 32.30
IUUC-Ola-087463 Oryzias latipes 60.11 0.00e+00 754.00
IUUC-Oga-089020 Otolemur garnettii 98.99 0.00e+00 1227.00
IUUC-Oar-090026 Ovis aries 90.19 0.00e+00 1378.00
IUUC-Ptr-090639 Pan troglodytes 97.25 0.00e+00 1436.00
IUUC-Pan-092418 Papio anubis 99.42 0.00e+00 1073.00
IUUC-Psi-093141 Pelodiscus sinensis 97.23 0.00e+00 1021.00
IUUC-Ppa-095438 Physcomitrella patens 30.77 9.00e-03 35.00
IUUC-Pfo-096325 Poecilia formosa 73.85 0.00e+00 1026.00
IUUC-Pab-098180 Pongo abelii 97.38 0.00e+00 1438.00
IUUC-Pca-100487 Procavia capensis 98.65 0.00e+00 1223.00
IUUC-Pva-102302 Pteropus vampyrus 90.37 0.00e+00 1104.00
IUUC-Sha-106963 Sarcophilus harrisii 98.31 0.00e+00 1219.00
IUUC-Stu-112175 Solanum tuberosum 34.21 5.60e-01 28.10
IUUC-Sar-113384 Sorex araneus 98.82 0.00e+00 1223.00
IUUC-Ssc-115971 Sus scrofa 93.99 0.00e+00 1412.00
IUUC-Tgu-117121 Taeniopygia guttata 91.85 0.00e+00 1435.00
IUUC-Tru-118767 Takifugu rubripes 61.35 0.00e+00 766.00
IUUC-Tni-120223 Tetraodon nigroviridis 75.54 0.00e+00 886.00
IUUC-Ttr-128230 Tursiops truncatus 98.99 0.00e+00 1221.00
IUUC-Vpa-130676 Vicugna pacos 90.48 0.00e+00 966.00
IUUC-Xtr-132122 Xenopus tropicalis 85.23 0.00e+00 1276.00
Created Date 25-Jun-2017

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