iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000004648.1	ENSONIT00000005857.1	ENSONIP00000005853.1
ENSONIG00000004648.1	ENSONIT00000005858.1	ENSONIP00000005854.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.90e-07	31.5	60	126
E3 activity/RING/RING	2.40e-07	31.6	64	107

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggk....tcPvtrqplteedlvPnltlrrliq 66
           +e+ C+I l+ ++dPv+l++G+ + r +I  + +++g     +cP +r+ + +++++ n+ +++l+ 
   Q: 60   KELTCAICLDFFKDPVILKCGHNFCRFCICMHWDENGGdygyQCPQCRTVFNKRTFTKNYLVQNLVA 126
           7899*************************9999877777999******************9999876 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           CaiCl+ fkd p++l CgH f++ C+  +w    n      +CP Cr
   Q: 64   CAICLDFFKD-PVILKCGHNFCRFCIcMHW--DENGGDYGYQCPQCR 107
           **********.999****************..6666777778****8 PP

Organism

Oreochromis niloticus

Protein Sequence
(Fasta)

MQLNREKVKS DWLRAKATLH KCAHFPPSIL FLHFLQWQFS AAGWFVNMAT AGTSGDDLRK 60
ELTCAICLDF FKDPVILKCG HNFCRFCICM HWDENGGDYG YQCPQCRTVF NKRTFTKNYL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGCCAGTA TTCTCGCTGG GTTGTTGGGG ATCAAATACT TATTTCACTC AGTGACATGA 60
AAATCAATTT TTATATAATG TGTTTTGGTT CTAGATTCCT GGTTGATATT CTGTCTCTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13765--PRY
PF00622--SPRY
PF00643--zf-B_box

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00589--PRY
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011001	Astyanax mexicanus	68.48	2.00e-96	345.00
IUUC-Dre-028391	Danio rerio	72.77	0.00e+00	700.00
IUUC-Gmo-039179	Gadus morhua	78.08	0.00e+00	731.00
IUUC-Gac-042093	Gasterosteus aculeatus	85.98	0.00e+00	780.00
IUUC-Pfo-097051	Poecilia formosa	88.28	0.00e+00	832.00
IUUC-Tru-117564	Takifugu rubripes	73.42	0.00e+00	677.00
IUUC-Tni-120905	Tetraodon nigroviridis	76.53	0.00e+00	680.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence