iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pab-097892

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABGA01158077

Gene Name

WDR41

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000015577.2	ENSPPYT00000033425.1	ENSPPYP00000024163.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.90e-21	74.0	282	314

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtcla.fsdtllvsGsdDgtikvWDlrtg 33
           H + v  +a ++++ l+s+s Dg++++W+lr+ 
   Q: 282  HDSNVLHIAkLPNRQLISCSEDGSVRIWELREK 314
           666677776567799**************9875 PP

Organism

Pongo abelii

Protein Sequence
(Fasta)

MSPVIFFFLD PFSLTRFASA GDDGIVVVWN AQTGEKLLEL NGHTQKITAI ITFSSLGSCE 60
EKNQLILTAS ADRTVIVWDG DTARQVQRIS CFQSTVKCLT VLQRLDVWLS GGNDLCVWNR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTAATCTTA GTAATTAAAT GTCACCAGTG ATTTTTTTTT TTCTTGACCC TTTCTCCCTA 60
ACCAGATTTG CATCTGCTGG TGATGATGGA ATTGTAGTTG TGTGGAATGC CCAGGTGTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0732--Signal
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0032045--C:guanyl-nucleotide exchange factor complex
GO:0005765--C:lysosomal membrane
GO:0017112--F:Rab guanyl-nucleotide exchange factor activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001900	Ailuropoda melanoleuca	89.88	0.00e+00	768.00
IUUC-Apl-004087	Anas platyrhynchos	76.70	1.00e-179	622.00
IUUC-Aca-005359	Anolis carolinensis	69.32	2.00e-170	592.00
IUUC-Ame-010669	Astyanax mexicanus	51.34	1.00e-68	253.00
IUUC-Bta-013534	Bos taurus	86.75	0.00e+00	748.00
IUUC-Cja-019219	Callithrix jacchus	93.73	0.00e+00	768.00
IUUC-Cfa-020310	Canis familiaris	90.36	0.00e+00	775.00
IUUC-Cpo-021664	Cavia porcellus	89.37	0.00e+00	766.00
IUUC-Csa-024228	Chlorocebus sabaeus	95.42	0.00e+00	810.00
IUUC-Cho-024898	Choloepus hoffmanni	96.36	5.00e-92	331.00
IUUC-Dre-028538	Danio rerio	54.00	2.00e-112	399.00
IUUC-Dno-028861	Dasypus novemcinctus	89.16	0.00e+00	761.00
IUUC-Dor-030111	Dipodomys ordii	88.43	0.00e+00	763.00
IUUC-Ete-032444	Echinops telfairi	91.59	3.00e-169	587.00
IUUC-Eca-033676	Equus caballus	87.95	0.00e+00	749.00
IUUC-Eeu-034571	Erinaceus europaeus	78.31	0.00e+00	660.00
IUUC-Fca-035387	Felis catus	91.33	0.00e+00	778.00
IUUC-Fal-037310	Ficedula albicollis	73.98	0.00e+00	632.00
IUUC-Gmo-039224	Gadus morhua	53.07	9.00e-119	419.00
IUUC-Gga-040957	Gallus gallus	75.30	0.00e+00	638.00
IUUC-Gac-042385	Gasterosteus aculeatus	53.64	1.00e-121	429.00
IUUC-Ggo-044973	Gorilla gorilla	96.39	0.00e+00	816.00
IUUC-Hsa-046842	Homo sapiens	95.90	0.00e+00	816.00
IUUC-Itr-048784	Ictidomys tridecemlineatus	94.72	0.00e+00	638.00
IUUC-Lch-049625	Latimeria chalumnae	62.53	4.00e-152	531.00
IUUC-Loc-052368	Lepisosteus oculatus	58.50	4.00e-137	481.00
IUUC-Laf-053678	Loxodonta africana	89.59	0.00e+00	758.00
IUUC-Mcc-055184	Macaca mulatta	95.66	0.00e+00	810.00
IUUC-Meu-056165	Macropus eugenii	75.12	0.00e+00	634.00
IUUC-Mga-060184	Meleagris gallopavo	67.94	2.00e-44	171.00
IUUC-Mmr-060965	Microcebus murinus	92.53	0.00e+00	786.00
IUUC-Mdo-062702	Monodelphis domestica	84.06	0.00e+00	726.00
IUUC-Mmu-063649	Mus musculus	78.65	2.00e-85	309.00
IUUC-Mpu-065747	Mustela putorius furo	88.43	0.00e+00	759.00
IUUC-Mlu-067873	Myotis lucifugus	91.06	0.00e+00	775.00
IUUC-Nle-069670	Nomascus leucogenys	96.14	0.00e+00	811.00
IUUC-Opr-070266	Ochotona princeps	79.28	0.00e+00	674.00
IUUC-Ont-071242	Oreochromis niloticus	52.73	1.00e-119	422.00
IUUC-Oan-072879	Ornithorhynchus anatinus	83.37	0.00e+00	715.00
IUUC-Ocu-074872	Oryctolagus cuniculus	64.62	4.00e-143	501.00
IUUC-Ola-087211	Oryzias latipes	52.00	8.00e-110	390.00
IUUC-Oga-088852	Otolemur garnettii	90.12	0.00e+00	777.00
IUUC-Oar-089812	Ovis aries	86.75	0.00e+00	745.00
IUUC-Ptr-091067	Pan troglodytes	96.63	0.00e+00	819.00
IUUC-Pan-091778	Papio anubis	95.42	0.00e+00	810.00
IUUC-Psi-093932	Pelodiscus sinensis	76.16	0.00e+00	646.00
IUUC-Pfo-096845	Poecilia formosa	54.00	4.00e-119	421.00
IUUC-Pca-100567	Procavia capensis	63.61	1.00e-141	496.00
IUUC-Pva-102560	Pteropus vampyrus	87.23	0.00e+00	735.00
IUUC-Rno-105662	Rattus norvegicus	84.71	0.00e+00	727.00
IUUC-Sha-107058	Sarcophilus harrisii	84.54	0.00e+00	730.00
IUUC-Sar-113643	Sorex araneus	80.62	0.00e+00	627.00
IUUC-Ssc-115791	Sus scrofa	89.16	0.00e+00	761.00
IUUC-Tgu-117145	Taeniopygia guttata	75.18	1.00e-175	608.00
IUUC-Tru-117875	Takifugu rubripes	54.85	5.00e-125	441.00
IUUC-Tsy-119030	Tarsius syrichta	93.68	0.00e+00	711.00
IUUC-Tni-119761	Tetraodon nigroviridis	52.78	1.00e-118	419.00
IUUC-Tbe-127757	Tupaia belangeri	91.29	0.00e+00	760.00
IUUC-Ttr-128762	Tursiops truncatus	91.81	0.00e+00	781.00
IUUC-Vpa-130360	Vicugna pacos	90.84	0.00e+00	773.00
IUUC-Xtr-131954	Xenopus tropicalis	64.08	1.00e-150	525.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence