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Tag Content
iUUCD ID IUUC-Stu-112659
Ensembl Protein ID PGSC0003DMT400041481
UniProt Accession M1BBF7; M1BBF7_SOLTU
Protein Name Uncharacterized protein
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400016078 PGSC0003DMT400041481 PGSC0003DMT400041481
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 8.30e-39 131.1 243 274
UBD/Beta-Prp 9.10e-58 197.0 29 322
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
    gH+++v +++ +d +++Gs D+t+k+WDl
   Q: 243 GHASWVLSVDVsPDgAAVATGSSDKTVKLWDL 274
    8***********997889*************8 PP
   


   UBD/Beta-Prp

   S: 21   dksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsg.dk 108
    + ll+tg+ d+t+++wd t+ ++l++ gh +v +v+ +p++ i +++s D +i+v++++t+ ++ tl++ ++v+ l+fsp+g
   Q: 29 KPALLLTGGLDETVRLWDPTKLTCLHTNTGHCLGVVSVTAHPNRRIAASASLDSFIRVFEVDTNNTIATLEAPPSEVWQLQFSPDGsTL 117
    33599*******************************************************************************99455 PP
   S: 109 lvsGshdrtirvwdletgqclee............tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvys 185
    ++G+ + +++wd+ + q + + +sg +++v +v+++ dg+ll+ Gs D+t+ ++d++++k l+ l+g h +v+s
   Q: 118 AAAGGGSSSVKLWDTTQWQLVATlsiprqggsqpsEKSGSKKFVLSVAWNTDGRLLACGSVDGTISVFDVARAKFLHFLEG-HCMPVRS 205
    567999********999999999*********************************************************9.******* PP
   S: 186 lsfdsng...kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisva 271
    l f+++ + l sgs+dg v ++d + ++ + +l gh ++v+sv++sp++ +++gssD+++++Wdl+ + ++tl++h ++v+sva
   Q: 206 LVFSPSLhdsRILFSGSDDGHVHVYDAEGKTLLTSLSGHASWVLSVDVSPDGAAVATGSSDKTVKLWDLKMRAATQTLTNHTDQVWSVA 294
    **99876777******************************************************************************* PP
   S: 272 v.....lsfgdnvlvlgsedskvniwkl 294
    + +++ +l+++s+d+++ ++++
   Q: 295 FgppsrIDVRSCMLASVSDDKSISFYQY 322
    *999777777888888899******997 PP
   

Organism Solanum tuberosum
Protein Sequence
(Fasta)
MKLAPLDSIQ NAHEDSLWTA AWVRSDGDKP ALLLTGGLDE TVRLWDPTKL TCLHTNTGHC 60
LGVVSVTAHP NRRIAASASL DSFIRVFEVD TNNTIATLEA PPSEVWQLQF SPDGSTLAAA 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Stu-112659|E3,WD_repeat;UBD,Beta-Prp|Solanum tuberosum
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CACTAACTAC GTATCGAACC TGAATATGCC AGCCCGGAGG GTTGCGTAGT GAAAATAGAT 60
TTTACTTTAT AGCAAAGAAA GTGACCAGAG AGACCTTCAA TGTCCTAGGG TTTAACCACA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Stu-112659|E3,WD_repeat;UBD,Beta-Prp|Solanum tuberosum
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000774 Aegilops tauschii 54.73 1.00e-97 348.00
IUUC-Ame-011511 Astyanax mexicanus 40.00 3.00e-57 213.00
IUUC-Bdi-015020 Brachypodium distachyon 62.15 2.00e-97 347.00
IUUC-Cho-024421 Choloepus hoffmanni 33.03 3.00e-19 87.00
IUUC-Cin-025261 Ciona intestinalis 38.34 5.00e-57 213.00
IUUC-Dre-027706 Danio rerio 32.27 2.00e-38 151.00
IUUC-Gmo-039579 Gadus morhua 40.58 9.00e-59 219.00
IUUC-Gac-042100 Gasterosteus aculeatus 40.58 1.00e-59 222.00
IUUC-Gma-044408 Glycine max 69.66 4.00e-132 462.00
IUUC-Hvu-047591 Hordeum vulgare 60.62 1.00e-101 361.00
IUUC-Loc-052540 Lepisosteus oculatus 40.13 2.00e-54 204.00
IUUC-Ont-071981 Oreochromis niloticus 40.58 5.00e-58 216.00
IUUC-Oba-075255 Oryza barthii 63.33 4.00e-87 313.00
IUUC-Obr-076168 Oryza brachyantha 58.68 1.00e-72 265.00
IUUC-Olo-080617 Oryza longistaminata 65.07 5.00e-54 201.00
IUUC-Ola-086696 Oryzias latipes 41.01 4.00e-56 210.00
IUUC-Pte-104236 Pyrenophora teres 32.27 2.00e-23 102.00
IUUC-Sit-110048 Setaria italica 62.15 3.00e-95 340.00
IUUC-Sly-111249 Solanum lycopersicum 97.52 4.00e-180 622.00
IUUC-Sbi-114309 Sorghum bicolor 61.85 2.00e-95 340.00
IUUC-Tru-117933 Takifugu rubripes 39.94 1.00e-58 218.00
IUUC-Tni-120191 Tetraodon nigroviridis 39.06 8.00e-42 162.00
IUUC-Tae-124056 Triticum aestivum 61.85 7.00e-101 358.00
IUUC-Tur-126711 Triticum urartu 60.43 3.00e-97 347.00
IUUC-Xma-134154 Xiphophorus maculatus 39.62 6.00e-55 206.00
Created Date 25-Jun-2017

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