iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-115604

Ensembl Protein ID

ENSSSCP00000016213.2

UniProt Accession

F1S359; F1S359_PIG

Genbank Protein ID

ENSSSCP00000016213

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

FP103014

Gene Name

RBBP5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000015288.2	ENSSSCT00000016659.2	ENSSSCP00000016213.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-11	44.5	70	107

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H  +v++l++  d + lvs+s D+ +  WD+ +g++ +
   Q: 70   HIHPVCSLCWsRDgHKLVSASTDNIVSQWDVLSGDCDQ 107
           889********88799*******************976 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

VCYINFLCFV AESFGQNYPE EADGTLDCIS MALTCTFNRW GTLLAVGCND GRIVIWDFLT 60
RGIAKIISAH IHPVCSLCWS RDGHKLVSAS TDNIVSQWDV LSGDCDQRFR FPSPILKVQY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTATGCTACA TTAACTTTCT TTGCTTTGTT GCAGAGTCCT TTGGGCAGAA TTATCCAGAG 60
GTAAGAGTAT AGTCATGAGA TTTTAGAAAC AGTAACTTAC TAGCTTTTCT ATTTTAGTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0071339--C:MLL1 complex
GO:0044666--C:MLL3/4 complex
GO:0005730--C:nucleolus
GO:0048188--C:Set1C/COMPASS complex
GO:0042800--F:histone methyltransferase activity (H3-K4 specific)
GO:0044212--F:transcription regulatory region DNA binding
GO:0006974--P:cellular response to DNA damage stimulus
GO:0043627--P:response to estrogen

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000616	Aegilops tauschii	35.95	1.00e-63	237.00
IUUC-Aml-002118	Ailuropoda melanoleuca	98.90	0.00e+00	1050.00
IUUC-Atr-002777	Amborella trichopoda	36.90	6.00e-60	224.00
IUUC-Apl-004056	Anas platyrhynchos	96.29	0.00e+00	999.00
IUUC-Aca-004999	Anolis carolinensis	94.14	0.00e+00	969.00
IUUC-Aly-006092	Arabidopsis lyrata	36.16	2.00e-55	210.00
IUUC-Ath-006947	Arabidopsis thaliana	33.77	1.00e-57	217.00
IUUC-Ago-007753	Ashbya gossypii	31.47	8.00e-39	154.00
IUUC-Acl-008105	Aspergillus clavatus	32.49	8.00e-46	177.00
IUUC-Afl-008633	Aspergillus flavus	32.08	2.00e-44	173.00
IUUC-Afu-009075	Aspergillus fumigatus	35.98	1.00e-30	127.00
IUUC-Ani-009233	Aspergillus nidulans	33.41	3.00e-55	209.00
IUUC-Ang-009695	Aspergillus niger	32.71	4.00e-45	175.00
IUUC-Aor-009988	Aspergillus oryzae	32.08	2.00e-44	173.00
IUUC-Ate-010313	Aspergillus terreus	31.58	2.00e-44	172.00
IUUC-Ame-011134	Astyanax mexicanus	78.55	0.00e+00	800.00
IUUC-Bgr-012302	Blumeria graminis	32.02	1.00e-45	176.00
IUUC-Bta-012946	Bos taurus	98.32	0.00e+00	1019.00
IUUC-Bci-013968	Botrytis cinerea	34.84	2.00e-53	202.00
IUUC-Bdi-014387	Brachypodium distachyon	36.78	3.00e-71	262.00
IUUC-Bra-017414	Brassica rapa	37.75	1.00e-57	217.00
IUUC-Cel-018610	Caenorhabditis elegans	42.15	1.00e-82	300.00
IUUC-Cja-019938	Callithrix jacchus	98.71	0.00e+00	1031.00
IUUC-Cfa-020726	Canis familiaris	99.44	0.00e+00	1037.00
IUUC-Cpo-021560	Cavia porcellus	100.00	0.00e+00	648.00
IUUC-Cre-022588	Chlamydomonas reinhardtii	50.43	3.00e-29	122.00
IUUC-Csa-024192	Chlorocebus sabaeus	98.32	0.00e+00	1019.00
IUUC-Cho-024355	Choloepus hoffmanni	99.57	0.00e+00	889.00
IUUC-Cin-025285	Ciona intestinalis	66.88	1.00e-178	619.00
IUUC-Csv-026366	Ciona savignyi	65.88	2.00e-169	588.00
IUUC-Cgl-026450	Colletotrichum gloeosporioides	30.95	8.00e-43	167.00
IUUC-Cne-027092	Cryptococcus neoformans	31.15	2.00e-46	179.00
IUUC-Cme-027137	Cyanidioschyzon merolae	31.32	4.00e-26	112.00
IUUC-Dre-027374	Danio rerio	89.94	0.00e+00	848.00
IUUC-Dno-030003	Dasypus novemcinctus	93.94	0.00e+00	957.00
IUUC-Dor-030355	Dipodomys ordii	97.02	0.00e+00	1007.00
IUUC-Dse-031442	Dothistroma septosporum	32.89	8.00e-50	191.00
IUUC-Dme-031932	Drosophila melanogaster	66.74	0.00e+00	669.00
IUUC-Ete-032858	Echinops telfairi	91.32	0.00e+00	770.00
IUUC-Eca-034217	Equus caballus	98.13	0.00e+00	1015.00
IUUC-Eeu-035024	Erinaceus europaeus	95.16	0.00e+00	979.00
IUUC-Fca-035370	Felis catus	100.00	0.00e+00	1051.00
IUUC-Fal-036628	Ficedula albicollis	91.81	0.00e+00	811.00
IUUC-Fox-037739	Fusarium oxysporum	31.47	4.00e-46	178.00
IUUC-Fso-038094	Fusarium solani	31.50	2.00e-44	172.00
IUUC-Gmo-039088	Gadus morhua	89.13	0.00e+00	860.00
IUUC-Ggr-040063	Gaeumannomyces graminis	33.16	3.00e-54	205.00
IUUC-Gga-041160	Gallus gallus	96.08	0.00e+00	974.00
IUUC-Gac-041333	Gasterosteus aculeatus	90.22	0.00e+00	879.00
IUUC-Gma-043909	Glycine max	37.61	1.00e-63	237.00
IUUC-Ggo-044657	Gorilla gorilla	98.32	0.00e+00	1019.00
IUUC-Hsa-045894	Homo sapiens	98.32	0.00e+00	1019.00
IUUC-Hvu-047662	Hordeum vulgare	32.01	6.00e-64	238.00
IUUC-Itr-048125	Ictidomys tridecemlineatus	98.06	0.00e+00	972.00
IUUC-Kpa-049095	Komagataella pastoris	28.78	3.00e-35	142.00
IUUC-Lch-049495	Latimeria chalumnae	67.92	4.00e-176	610.00
IUUC-Lpe-051038	Leersia perrieri	34.91	5.00e-59	221.00
IUUC-Loc-052680	Lepisosteus oculatus	91.70	0.00e+00	937.00
IUUC-Laf-053717	Loxodonta africana	99.26	0.00e+00	1045.00
IUUC-Mcc-055007	Macaca mulatta	100.00	0.00e+00	986.00
IUUC-Meu-056494	Macropus eugenii	96.76	1.00e-132	466.00
IUUC-Mor-057173	Magnaporthe oryzae	33.43	3.00e-54	206.00
IUUC-Mpo-057622	Magnaporthe poae	32.01	3.00e-54	205.00
IUUC-Mtr-058687	Medicago truncatula	37.75	2.00e-68	253.00
IUUC-Mla-059057	Melampsora laricipopulina	33.86	4.00e-45	175.00
IUUC-Mga-060037	Meleagris gallopavo	95.93	0.00e+00	993.00
IUUC-Mvi-060321	Microbotryum violaceum	32.65	8.00e-48	184.00
IUUC-Mmr-060755	Microcebus murinus	98.68	0.00e+00	1009.00
IUUC-Mdo-061859	Monodelphis domestica	96.83	0.00e+00	991.00
IUUC-Mmu-063755	Mus musculus	97.39	0.00e+00	1008.00
IUUC-Mac-065292	Musa acuminata	35.25	2.00e-72	266.00
IUUC-Mpu-065896	Mustela putorius furo	99.79	0.00e+00	942.00
IUUC-Mlu-067927	Myotis lucifugus	98.51	0.00e+00	1021.00
IUUC-Nfi-068429	Neosartorya fischeri	32.27	1.00e-46	180.00
IUUC-Ncr-068738	Neurospora crassa	30.89	3.00e-47	182.00
IUUC-Nle-069608	Nomascus leucogenys	98.32	0.00e+00	1019.00
IUUC-Opr-070319	Ochotona princeps	97.75	0.00e+00	1008.00
IUUC-Ont-071451	Oreochromis niloticus	90.93	0.00e+00	888.00
IUUC-Oan-073445	Ornithorhynchus anatinus	97.83	0.00e+00	849.00
IUUC-Ocu-074341	Oryctolagus cuniculus	98.14	0.00e+00	1017.00
IUUC-Oba-075664	Oryza barthii	35.53	8.00e-64	238.00
IUUC-Obr-076630	Oryza brachyantha	34.85	6.00e-60	224.00
IUUC-Ogl-077847	Oryza glaberrima	35.40	1.00e-63	237.00
IUUC-Ogu-077970	Oryza glumaepatula	36.02	3.00e-63	235.00
IUUC-Oin-079374	Oryza indica	35.35	1.00e-63	237.00
IUUC-Olo-080992	Oryza longistaminata	35.35	2.00e-63	236.00
IUUC-Ome-081683	Oryza meridionalis	37.30	1.00e-60	227.00
IUUC-Oni-082594	Oryza nivara	35.35	1.00e-63	237.00
IUUC-Opu-083907	Oryza punctata	35.95	9.00e-65	241.00
IUUC-Oru-084400	Oryza rufipogon	35.35	1.00e-63	237.00
IUUC-Osa-085442	Oryza sativa	35.35	1.00e-63	237.00
IUUC-Ola-086569	Oryzias latipes	90.79	0.00e+00	811.00
IUUC-Oga-088947	Otolemur garnettii	93.68	0.00e+00	964.00
IUUC-Oar-090358	Ovis aries	99.45	0.00e+00	1046.00
IUUC-Ptr-091601	Pan troglodytes	100.00	0.00e+00	1016.00
IUUC-Pan-092466	Papio anubis	98.32	0.00e+00	1019.00
IUUC-Psi-093614	Pelodiscus sinensis	96.65	0.00e+00	1000.00
IUUC-Pma-094450	Petromyzon marinus	87.85	0.00e+00	770.00
IUUC-Pno-094819	Phaeosphaeria nodorum	34.47	2.00e-47	183.00
IUUC-Ppa-095157	Physcomitrella patens	34.15	1.00e-24	106.00
IUUC-Pfo-096312	Poecilia formosa	89.60	0.00e+00	859.00
IUUC-Pab-098058	Pongo abelii	98.32	0.00e+00	1019.00
IUUC-Pop-099039	Populus trichocarpa	38.37	5.00e-62	231.00
IUUC-Pca-100623	Procavia capensis	93.48	0.00e+00	960.00
IUUC-Ppe-102053	Prunus persica	38.88	6.00e-70	258.00
IUUC-Pva-102779	Pteropus vampyrus	94.79	0.00e+00	956.00
IUUC-Pgr-103398	Puccinia graminis	34.83	8.00e-50	191.00
IUUC-Ptt-103912	Puccinia triticina	35.00	3.00e-49	189.00
IUUC-Pte-104246	Pyrenophora teres	32.87	1.00e-47	184.00
IUUC-Pyt-104582	Pyrenophora triticirepentis	33.18	9.00e-48	184.00
IUUC-Rno-104838	Rattus norvegicus	97.58	0.00e+00	1010.00
IUUC-Sce-106229	Saccharomyces cerevisiae	30.89	1.00e-33	137.00
IUUC-Sha-106527	Sarcophilus harrisii	97.01	0.00e+00	989.00
IUUC-Sja-107862	Schizosaccharomyces japonicus	34.24	1.00e-56	213.00
IUUC-Spo-108025	Schizosaccharomyces pombe	36.39	4.00e-53	201.00
IUUC-Ssl-108544	Sclerotinia sclerotiorum	34.34	4.00e-52	198.00
IUUC-Smo-109474	Selaginella moellendorffii	34.62	2.00e-52	199.00
IUUC-Sit-110687	Setaria italica	35.79	3.00e-57	216.00
IUUC-Sly-111597	Solanum lycopersicum	37.16	1.00e-62	234.00
IUUC-Stu-112389	Solanum tuberosum	36.49	4.00e-62	231.00
IUUC-Sar-113284	Sorex araneus	84.67	0.00e+00	834.00
IUUC-Sbi-114362	Sorghum bicolor	32.16	7.00e-56	211.00
IUUC-Sre-115146	Sporisorium reilianum	29.18	8.00e-34	138.00
IUUC-Tgu-117010	Taeniopygia guttata	80.30	3.00e-73	267.00
IUUC-Tru-118258	Takifugu rubripes	89.33	0.00e+00	877.00
IUUC-Tsy-119169	Tarsius syrichta	89.28	0.00e+00	631.00
IUUC-Tni-119668	Tetraodon nigroviridis	88.74	0.00e+00	857.00
IUUC-Tca-121010	Theobroma cacao	38.83	2.00e-69	256.00
IUUC-Tre-121944	Trichoderma reesei	31.99	1.00e-45	177.00
IUUC-Tvi-122283	Trichoderma virens	32.32	5.00e-44	171.00
IUUC-Tur-126395	Triticum urartu	36.49	5.00e-65	242.00
IUUC-Tme-127150	Tuber melanosporum	36.03	1.00e-62	233.00
IUUC-Tbe-127745	Tupaia belangeri	83.28	1.00e-138	486.00
IUUC-Ttr-129187	Tursiops truncatus	92.55	0.00e+00	916.00
IUUC-Uma-129654	Ustilago maydis	28.33	1.00e-30	127.00
IUUC-Vda-129788	Verticillium dahliae	28.93	1.00e-46	180.00
IUUC-Vpa-130182	Vicugna pacos	99.50	0.00e+00	756.00
IUUC-Vvi-131557	Vitis vinifera	38.29	2.00e-69	256.00
IUUC-Xtr-132007	Xenopus tropicalis	91.40	0.00e+00	904.00
IUUC-Xma-133909	Xiphophorus maculatus	89.57	0.00e+00	875.00
IUUC-Yli-134524	Yarrowia lipolytica	36.19	3.00e-56	211.00
IUUC-Zma-134821	Zea mays	32.75	5.00e-58	218.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence