iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114489

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G526300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g048980	Sb01g048980.1	Sb01g048980.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-26	91.8	332	364
E3 adaptor/Cullin RING/APC_C/CDC20	4.10e-144	480.3	198	499

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlr 31
           gH+++v++l++  +++ l+sG++D+ + vW+++
   Q: 332  GHKSEVCGLKWsyDNRQLASGGNDNRLFVWNPH 364
           8**********964499**************76 PP

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 1    pekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladleekdlvtsvswieegtllavGtkkgeveiyDveekkkvrtltghs 96
           p+kvldap l+ddfylnL+dWss+nvlav+Lg++vylw+a++++v+kl+dl  +d v+sv w ++gt+lavGt++g+v+i+D++++k++rt+++h 
   Q: 198  PYKVLDAPALQDDFYLNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGVDDNVCSVGWAQRGTHLAVGTNQGKVQIWDATRCKRIRTMESHR 293
           79********************************************************************************************** PP
   S: 97   arvgaLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdasssePlkkfkehkaavkaiawsPwqk 192
            rvgaL+W + +lssGsrd++ilh+d+r++e  +s+l++h++evCGlkw+ d+++LasGGnDn + vw+ +s +P+ k++eh+aavkaiawsP+ +
   Q: 294  MRVGALAWSSSLLSSGSRDKSILHHDIRAQEDYVSKLTGHKSEVCGLKWSYDNRQLASGGNDNRLFVWNPHSVQPVLKYTEHTAAVKAIAWSPHLH 389
           ************************************************************************************************ PP
   S: 193  slLasGGGtaDrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvlslalspdgeaivtaagD 288
           +lLasGGGtaDrci+fwnt+t + l+++dtgsqvc+l+wsk+ +elvsthG+++n+i++w+yp++sk+a+l+gh++Rvl+la+spdg++ivt+agD
   Q: 390  GLLASGGGTADRCIRFWNTTTNTNLSCVDTGSQVCNLAWSKNVNELVSTHGYSQNQIIVWRYPTMSKLATLTGHTYRVLYLAISPDGQTIVTGAGD 485
           ************************************************************************************************ PP
   S: 289  etlrfwklfdkkka 302
           etlrfw++f + k+
   Q: 486  ETLRFWNVFPSPKS 499
           *********87665 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDHHLTPSPP SPMENSAAGP SSKPPTPAST PNSRLASAPS SRHSATTSHA SAPSSAPTPA 60
SRTVYSDRFI PSRTGSNLAL FDLAPSPSAA SSSHEGGPAV SSGSATAASP YCALLRAALF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGCCTTAGT TATCCACCCA CCCCGTCGCA CTCGCACCGC ATCTCCCCCG ATCCCCAATT 60
CCTCCCATTC TCCACGACCC TCGCCGCCCA TGGATCACCA CCTCACGCCG TCGCCGCCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

KEGG

sbi:SORBI_01g048980

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000670	Aegilops tauschii	84.68	3.00e-171	594.00
IUUC-Aml-002003	Ailuropoda melanoleuca	53.05	2.00e-129	455.00
IUUC-Atr-002753	Amborella trichopoda	73.39	1.00e-177	615.00
IUUC-Apl-003212	Anas platyrhynchos	52.49	5.00e-132	463.00
IUUC-Aly-005442	Arabidopsis lyrata	73.26	0.00e+00	657.00
IUUC-Ath-006938	Arabidopsis thaliana	72.75	0.00e+00	644.00
IUUC-Ago-007784	Ashbya gossypii	51.72	3.00e-94	338.00
IUUC-Ang-009711	Aspergillus niger	65.06	3.00e-125	441.00
IUUC-Ame-011773	Astyanax mexicanus	54.61	4.00e-129	454.00
IUUC-Bta-012586	Bos taurus	51.72	3.00e-131	461.00
IUUC-Bdi-014981	Brachypodium distachyon	88.18	0.00e+00	720.00
IUUC-Bol-016301	Brassica oleracea	72.63	0.00e+00	647.00
IUUC-Bra-017453	Brassica rapa	72.63	0.00e+00	648.00
IUUC-Cel-018472	Caenorhabditis elegans	64.17	3.00e-117	414.00
IUUC-Cja-019929	Callithrix jacchus	53.04	1.00e-131	462.00
IUUC-Cfa-020977	Canis familiaris	52.83	5.00e-131	460.00
IUUC-Cpo-021537	Cavia porcellus	51.52	4.00e-131	460.00
IUUC-Csa-023389	Chlorocebus sabaeus	51.93	5.00e-132	463.00
IUUC-Csv-025921	Ciona savignyi	66.56	7.00e-124	436.00
IUUC-Cme-027143	Cyanidioschyzon merolae	65.25	1.00e-120	427.00
IUUC-Dre-027470	Danio rerio	52.78	7.00e-130	456.00
IUUC-Dno-029629	Dasypus novemcinctus	67.82	2.00e-114	405.00
IUUC-Dse-031502	Dothistroma septosporum	47.06	2.00e-114	405.00
IUUC-Eca-034210	Equus caballus	51.72	2.00e-131	461.00
IUUC-Fca-035839	Felis catus	66.77	1.00e-127	449.00
IUUC-Fal-036895	Ficedula albicollis	52.49	4.00e-132	463.00
IUUC-Gmo-039544	Gadus morhua	52.82	1.00e-130	459.00
IUUC-Gga-041025	Gallus gallus	52.70	1.00e-132	465.00
IUUC-Gac-041596	Gasterosteus aculeatus	52.72	9.00e-131	459.00
IUUC-Gma-042657	Glycine max	70.73	0.00e+00	651.00
IUUC-Ggo-045599	Gorilla gorilla	53.08	3.00e-131	461.00
IUUC-Hsa-046695	Homo sapiens	53.04	1.00e-131	462.00
IUUC-Itr-048192	Ictidomys tridecemlineatus	52.33	2.00e-132	464.00
IUUC-Lch-049827	Latimeria chalumnae	52.71	1.00e-132	466.00
IUUC-Loc-052856	Lepisosteus oculatus	52.60	2.00e-131	461.00
IUUC-Mcc-055601	Macaca mulatta	51.93	5.00e-132	463.00
IUUC-Mtr-057689	Medicago truncatula	73.59	0.00e+00	654.00
IUUC-Mvi-060465	Microbotryum violaceum	49.29	2.00e-122	431.00
IUUC-Mdo-063062	Monodelphis domestica	52.50	4.00e-132	463.00
IUUC-Mac-065208	Musa acuminata	75.27	0.00e+00	643.00
IUUC-Ncr-068734	Neurospora crassa	66.35	4.00e-122	431.00
IUUC-Nle-070163	Nomascus leucogenys	51.93	9.00e-132	462.00
IUUC-Opr-070974	Ochotona princeps	67.14	1.00e-104	371.00
IUUC-Ont-072272	Oreochromis niloticus	53.08	1.00e-130	458.00
IUUC-Oan-073634	Ornithorhynchus anatinus	68.68	3.00e-112	397.00
IUUC-Obr-076123	Oryza brachyantha	92.60	0.00e+00	676.00
IUUC-Ogl-077294	Oryza glaberrima	86.96	0.00e+00	731.00
IUUC-Ogu-077996	Oryza glumaepatula	86.74	0.00e+00	727.00
IUUC-Oin-080172	Oryza indica	92.14	0.00e+00	680.00
IUUC-Olo-081068	Oryza longistaminata	92.01	0.00e+00	667.00
IUUC-Ome-081250	Oryza meridionalis	87.77	0.00e+00	732.00
IUUC-Oni-083048	Oryza nivara	86.96	0.00e+00	731.00
IUUC-Opu-083333	Oryza punctata	88.43	0.00e+00	728.00
IUUC-Oru-085001	Oryza rufipogon	86.96	0.00e+00	731.00
IUUC-Osa-086243	Oryza sativa	86.96	0.00e+00	731.00
IUUC-Ola-087094	Oryzias latipes	69.87	1.00e-127	448.00
IUUC-Oga-088911	Otolemur garnettii	51.72	3.00e-131	461.00
IUUC-Oar-089508	Ovis aries	51.72	3.00e-131	461.00
IUUC-Pan-092147	Papio anubis	53.04	1.00e-131	462.00
IUUC-Psi-093702	Pelodiscus sinensis	52.16	3.00e-132	464.00
IUUC-Pma-094581	Petromyzon marinus	60.87	3.00e-121	427.00
IUUC-Pno-095139	Phaeosphaeria nodorum	59.24	4.00e-116	410.00
IUUC-Pfo-096309	Poecilia formosa	52.72	4.00e-130	457.00
IUUC-Pop-098924	Populus trichocarpa	73.70	0.00e+00	637.00
IUUC-Ppe-101924	Prunus persica	71.06	0.00e+00	659.00
IUUC-Sce-106240	Saccharomyces cerevisiae	48.88	1.00e-90	326.00
IUUC-Sit-110563	Setaria italica	89.53	0.00e+00	759.00
IUUC-Sly-111446	Solanum lycopersicum	68.44	0.00e+00	643.00
IUUC-Stu-112491	Solanum tuberosum	73.00	0.00e+00	639.00
IUUC-Ssc-116171	Sus scrofa	51.72	3.00e-131	461.00
IUUC-Tgu-116878	Taeniopygia guttata	45.87	3.00e-108	384.00
IUUC-Tru-118222	Takifugu rubripes	53.90	8.00e-131	459.00
IUUC-Tni-119863	Tetraodon nigroviridis	52.83	4.00e-131	460.00
IUUC-Tca-121599	Theobroma cacao	76.03	0.00e+00	667.00
IUUC-Tae-123489	Triticum aestivum	79.55	0.00e+00	737.00
IUUC-Tme-127151	Tuber melanosporum	52.18	6.00e-134	469.00
IUUC-Vvi-131749	Vitis vinifera	73.62	0.00e+00	660.00
IUUC-Xma-133183	Xiphophorus maculatus	52.72	4.00e-130	457.00
IUUC-Zma-135717	Zea mays	91.72	0.00e+00	764.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence