iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-098921

Ensembl Protein ID

POPTR_0009s09740.1

UniProt Accession

B9HS71; B9HS71_POPTR

Genbank Protein ID

EEE87835.1

Protein Name

UMUC-like DNA repair family protein

Genbank Nucleotide ID

CM000345

Gene Name

POPTRDRAFT_767640; POPTR_0009s09740g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0009s09740	POPTR_0009s09740.1	POPTR_0009s09740.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBM	27.11	3.00e-41	165.00	IUUC-Sce-106236

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSFDSSRSSS ANSSRKSKRG LNNSNSSNNK NSKQKTLGMG RGANSLSSSR PSFRNSPFSN 60
FGSYMVEKNR KLQHQFEAEA STSSHPGSSS GKLIFQGVSI FIDGFTIPSN QELRAYMLKY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTAAAATTT AGAACACACG AACAACAGGG AGTCAAAAAG CTTCTTCCGC ACTCCATTCG 60
GATTCTCTCT GTATATCTAT CACACCTAAA GAAAAAAAGT AAAAACGGAA AGAAAATGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001357--BRCT_dom
IPR017961--DNA_pol_Y-fam_little_finger
IPR024728--PolY_HhH_motif
IPR001126--UmuC

PROSITE

PS50172--BRCT
PS50173--UMUC

Pfam

PF16589--BRCT_2
PF00817--IMS
PF11799--IMS_C
PF11798--IMS_HHH

SMART

SM00292--BRCT

Gene Ontology

GO:0003684--F:damaged DNA binding
GO:0003887--F:DNA-directed DNA polymerase activity
GO:0006281--P:DNA repair
GO:0010224--P:response to UV-B

KEGG

pop:POPTR_0009s09740g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000375	Aegilops tauschii	38.94	7.00e-91	328.00
IUUC-Aml-001185	Ailuropoda melanoleuca	36.19	2.00e-84	306.00
IUUC-Atr-002915	Amborella trichopoda	47.02	0.00e+00	679.00
IUUC-Apl-004054	Anas platyrhynchos	27.90	1.00e-100	361.00
IUUC-Aca-004304	Anolis carolinensis	31.98	8.00e-79	288.00
IUUC-Aly-005696	Arabidopsis lyrata	50.18	0.00e+00	950.00
IUUC-Ath-006893	Arabidopsis thaliana	49.78	0.00e+00	937.00
IUUC-Ago-007722	Ashbya gossypii	31.71	5.00e-47	182.00
IUUC-Acl-008347	Aspergillus clavatus	30.34	5.00e-92	332.00
IUUC-Afl-008444	Aspergillus flavus	33.65	2.00e-70	260.00
IUUC-Afu-008837	Aspergillus fumigatus	34.45	1.00e-72	268.00
IUUC-Ani-009188	Aspergillus nidulans	35.80	1.00e-73	271.00
IUUC-Ang-009866	Aspergillus niger	34.19	3.00e-73	270.00
IUUC-Aor-010107	Aspergillus oryzae	33.65	2.00e-70	260.00
IUUC-Ate-010359	Aspergillus terreus	34.45	1.00e-75	278.00
IUUC-Ame-010664	Astyanax mexicanus	41.76	9.00e-74	271.00
IUUC-Bgr-012244	Blumeria graminis	30.23	2.00e-71	263.00
IUUC-Bta-013405	Bos taurus	36.12	7.00e-77	281.00
IUUC-Bci-013849	Botrytis cinerea	28.93	4.00e-73	270.00
IUUC-Bdi-014066	Brachypodium distachyon	48.60	0.00e+00	661.00
IUUC-Bol-015544	Brassica oleracea	50.32	0.00e+00	942.00
IUUC-Bra-017792	Brassica rapa	49.08	0.00e+00	922.00
IUUC-Cel-018148	Caenorhabditis elegans	30.60	2.00e-58	220.00
IUUC-Cja-019742	Callithrix jacchus	30.79	8.00e-46	178.00
IUUC-Cfa-020112	Canis familiaris	36.33	3.00e-85	310.00
IUUC-Cpo-022152	Cavia porcellus	35.44	2.00e-81	297.00
IUUC-Cre-022951	Chlamydomonas reinhardtii	37.25	5.00e-62	231.00
IUUC-Csa-023504	Chlorocebus sabaeus	32.23	5.00e-78	285.00
IUUC-Cin-025276	Ciona intestinalis	40.05	2.00e-84	306.00
IUUC-Csv-026283	Ciona savignyi	34.98	2.00e-70	259.00
IUUC-Cgl-026726	Colletotrichum gloeosporioides	27.12	7.00e-90	325.00
IUUC-Cne-027079	Cryptococcus neoformans	35.16	3.00e-60	227.00
IUUC-Cme-027346	Cyanidioschyzon merolae	31.29	5.00e-50	192.00
IUUC-Dre-028073	Danio rerio	43.11	6.00e-73	269.00
IUUC-Dno-030038	Dasypus novemcinctus	37.00	3.00e-85	309.00
IUUC-Dor-031100	Dipodomys ordii	35.70	2.00e-75	277.00
IUUC-Dse-031310	Dothistroma septosporum	28.49	5.00e-73	269.00
IUUC-Dme-031991	Drosophila melanogaster	32.29	1.00e-68	254.00
IUUC-Ete-033082	Echinops telfairi	30.54	6.00e-59	222.00
IUUC-Eca-033471	Equus caballus	37.01	1.00e-84	307.00
IUUC-Eeu-034993	Erinaceus europaeus	41.07	7.00e-68	251.00
IUUC-Fca-035367	Felis catus	36.59	2.00e-84	307.00
IUUC-Fal-036973	Ficedula albicollis	42.63	3.00e-71	263.00
IUUC-Fox-037677	Fusarium oxysporum	36.43	4.00e-74	272.00
IUUC-Fso-038252	Fusarium solani	29.29	1.00e-86	314.00
IUUC-Gmo-039669	Gadus morhua	38.01	3.00e-82	299.00
IUUC-Ggr-039988	Gaeumannomyces graminis	34.37	4.00e-71	263.00
IUUC-Gga-040423	Gallus gallus	32.95	3.00e-81	296.00
IUUC-Gac-042134	Gasterosteus aculeatus	37.95	7.00e-81	295.00
IUUC-Gma-042929	Glycine max	52.64	0.00e+00	1086.00
IUUC-Ggo-044528	Gorilla gorilla	32.34	2.00e-80	293.00
IUUC-Hsa-046259	Homo sapiens	32.72	5.00e-80	292.00
IUUC-Hvu-047139	Hordeum vulgare	65.08	6.00e-112	397.00
IUUC-Itr-048621	Ictidomys tridecemlineatus	36.12	3.00e-84	306.00
IUUC-Kpa-049169	Komagataella pastoris	33.02	1.00e-60	228.00
IUUC-Lch-050471	Latimeria chalumnae	41.27	4.00e-73	270.00
IUUC-Lpe-050800	Leersia perrieri	44.54	0.00e+00	815.00
IUUC-Loc-052320	Lepisosteus oculatus	26.84	1.00e-43	172.00
IUUC-Lma-053149	Leptosphaeria maculans	28.61	1.00e-76	281.00
IUUC-Laf-053810	Loxodonta africana	36.79	3.00e-79	290.00
IUUC-Mcc-055574	Macaca mulatta	35.55	3.00e-77	283.00
IUUC-Meu-055945	Macropus eugenii	31.35	1.00e-29	125.00
IUUC-Mor-057195	Magnaporthe oryzae	30.34	1.00e-86	314.00
IUUC-Mpo-057488	Magnaporthe poae	29.27	1.00e-71	265.00
IUUC-Mtr-057955	Medicago truncatula	51.74	0.00e+00	1061.00
IUUC-Mla-059027	Melampsora laricipopulina	36.32	3.00e-59	223.00
IUUC-Mga-060156	Meleagris gallopavo	34.09	4.00e-81	296.00
IUUC-Mvi-060398	Microbotryum violaceum	36.47	2.00e-65	243.00
IUUC-Mmr-061113	Microcebus murinus	32.35	7.00e-80	292.00
IUUC-Mdo-063001	Monodelphis domestica	35.92	4.00e-78	286.00
IUUC-Mmu-063180	Mus musculus	35.43	3.00e-76	280.00
IUUC-Mac-065551	Musa acuminata	43.59	1.00e-133	469.00
IUUC-Mpu-066525	Mustela putorius furo	36.33	2.00e-84	307.00
IUUC-Mlu-067877	Myotis lucifugus	36.01	3.00e-79	290.00
IUUC-Nfi-068418	Neosartorya fischeri	27.94	9.00e-83	301.00
IUUC-Ncr-068648	Neurospora crassa	35.22	3.00e-72	266.00
IUUC-Nle-069959	Nomascus leucogenys	32.55	2.00e-79	290.00
IUUC-Opr-070522	Ochotona princeps	35.22	3.00e-59	223.00
IUUC-Ont-072293	Oreochromis niloticus	31.18	2.00e-73	271.00
IUUC-Oan-073519	Ornithorhynchus anatinus	34.38	4.00e-77	283.00
IUUC-Ocu-074492	Oryctolagus cuniculus	36.42	4.00e-79	289.00
IUUC-Oba-075567	Oryza barthii	44.77	0.00e+00	840.00
IUUC-Obr-076332	Oryza brachyantha	47.90	0.00e+00	654.00
IUUC-Ogl-077348	Oryza glaberrima	44.88	0.00e+00	844.00
IUUC-Ogu-078779	Oryza glumaepatula	44.83	0.00e+00	838.00
IUUC-Oin-079738	Oryza indica	42.60	0.00e+00	767.00
IUUC-Olo-080701	Oryza longistaminata	42.78	0.00e+00	773.00
IUUC-Ome-081708	Oryza meridionalis	49.55	0.00e+00	686.00
IUUC-Oni-082251	Oryza nivara	44.57	0.00e+00	825.00
IUUC-Opu-083528	Oryza punctata	48.42	0.00e+00	676.00
IUUC-Oru-084293	Oryza rufipogon	44.22	0.00e+00	819.00
IUUC-Osa-085549	Oryza sativa	44.86	0.00e+00	843.00
IUUC-Ola-086793	Oryzias latipes	28.91	8.00e-76	278.00
IUUC-Olu-087786	Ostreococcus lucimarinus	33.00	4.00e-72	265.00
IUUC-Oga-089006	Otolemur garnettii	36.98	9.00e-80	291.00
IUUC-Oar-089597	Ovis aries	36.12	5.00e-83	302.00
IUUC-Ptr-091520	Pan troglodytes	32.55	6.00e-80	292.00
IUUC-Pan-092333	Papio anubis	35.55	2.00e-77	283.00
IUUC-Psi-094004	Pelodiscus sinensis	36.67	2.00e-78	287.00
IUUC-Pma-094128	Petromyzon marinus	37.11	1.00e-46	181.00
IUUC-Pno-094849	Phaeosphaeria nodorum	32.54	2.00e-68	253.00
IUUC-Ppa-095714	Physcomitrella patens	38.56	2.00e-150	526.00
IUUC-Pfo-096569	Poecilia formosa	37.36	2.00e-77	283.00
IUUC-Pab-097960	Pongo abelii	33.06	1.00e-79	291.00
IUUC-Pca-100509	Procavia capensis	32.24	3.00e-52	200.00
IUUC-Ppe-101730	Prunus persica	54.64	0.00e+00	1108.00
IUUC-Pva-102142	Pteropus vampyrus	36.90	2.00e-80	293.00
IUUC-Pgr-103446	Puccinia graminis	31.60	1.00e-48	187.00
IUUC-Ptt-103849	Puccinia triticina	30.54	3.00e-48	187.00
IUUC-Pte-104128	Pyrenophora teres	29.43	5.00e-91	329.00
IUUC-Pyt-104754	Pyrenophora triticirepentis	33.97	3.00e-75	276.00
IUUC-Rno-104871	Rattus norvegicus	35.85	4.00e-82	299.00
IUUC-Sce-106236	Saccharomyces cerevisiae	27.11	7.00e-42	165.00
IUUC-Sha-106962	Sarcophilus harrisii	36.13	3.00e-78	286.00
IUUC-Sja-107691	Schizosaccharomyces japonicus	38.42	3.00e-67	249.00
IUUC-Spo-108170	Schizosaccharomyces pombe	36.23	3.00e-61	229.00
IUUC-Ssl-108668	Sclerotinia sclerotiorum	35.08	3.00e-76	280.00
IUUC-Smo-109554	Selaginella moellendorffii	40.91	7.00e-171	594.00
IUUC-Sit-110479	Setaria italica	43.16	1.00e-168	587.00
IUUC-Sly-111752	Solanum lycopersicum	51.68	0.00e+00	1015.00
IUUC-Stu-112284	Solanum tuberosum	29.24	1.00e-30	127.00
IUUC-Sar-113304	Sorex araneus	37.01	3.00e-82	300.00
IUUC-Sbi-114196	Sorghum bicolor	41.92	2.00e-163	569.00
IUUC-Sre-115151	Sporisorium reilianum	30.92	1.00e-59	224.00
IUUC-Ssc-116104	Sus scrofa	35.97	8.00e-78	285.00
IUUC-Tgu-117438	Taeniopygia guttata	36.33	1.00e-80	294.00
IUUC-Tru-118553	Takifugu rubripes	42.81	1.00e-70	261.00
IUUC-Tsy-119056	Tarsius syrichta	38.07	1.00e-80	295.00
IUUC-Tni-119933	Tetraodon nigroviridis	35.83	2.00e-83	303.00
IUUC-Tca-121376	Theobroma cacao	55.80	0.00e+00	1197.00
IUUC-Tre-121972	Trichoderma reesei	35.17	4.00e-69	256.00
IUUC-Tvi-122342	Trichoderma virens	35.80	1.00e-68	254.00
IUUC-Tae-123898	Triticum aestivum	57.84	7.00e-177	613.00
IUUC-Tur-126735	Triticum urartu	40.07	1.00e-105	377.00
IUUC-Tme-126999	Tuber melanosporum	33.04	3.00e-68	253.00
IUUC-Tbe-127280	Tupaia belangeri	45.45	4.00e-29	123.00
IUUC-Ttr-129104	Tursiops truncatus	35.28	5.00e-77	282.00
IUUC-Uma-129562	Ustilago maydis	28.37	4.00e-60	226.00
IUUC-Vda-129862	Verticillium dahliae	36.19	3.00e-78	286.00
IUUC-Vpa-130819	Vicugna pacos	35.45	3.00e-42	166.00
IUUC-Vvi-131111	Vitis vinifera	58.75	0.00e+00	1194.00
IUUC-Xtr-132629	Xenopus tropicalis	29.34	1.00e-70	261.00
IUUC-Xma-134065	Xiphophorus maculatus	36.78	8.00e-78	285.00
IUUC-Yli-134633	Yarrowia lipolytica	31.87	2.00e-54	207.00
IUUC-Zma-135176	Zea mays	46.62	0.00e+00	801.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence