iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093508

Ensembl Protein ID

ENSPSIP00000004172.1

UniProt Accession

K7F812; K7F812_PELSI

Genbank Protein ID

ENSPSIP00000004172

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01048876

Gene Name

SEH1L

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000003934.1	ENSPSIT00000004195.1	ENSPSIP00000004172.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-16	58.5	286	315

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWD 29
           H++ v+ +++  ++t l+s++dDg +++W 
   Q: 286  HNSQVWRVSWniTGTVLASSGDDGCVRLWK 315
           9**********9889**************7 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MVINDPGFQS PAGSKGERLR AKETSCWSTL PETLECYLAG GSELDYVWDK TENGDWHCTA 60
SWKTHSGSVW RVTWAHPEFG QVLASCSFDR TAVVWEEIVG ESNDKLRGQS HWVKRTTLVD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCGGGGCGG GGGCGCCGCC CGGCCAGCCT TTCCCCCTGC CACGTGTGTC GGCGGCCTGC 60
TAGCTAGCGA GCCCGCCGTC CCTTTCAAAG CCCTGCAGGG AGCAAGGGTG AGAGACTGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0061700--C:GATOR2 complex
GO:0000776--C:kinetochore
GO:0031080--C:nuclear pore outer ring
GO:0051315--P:attachment of mitotic spindle microtubules to kinetochore
GO:0034629--P:cellular protein complex localization
GO:0034198--P:cellular response to amino acid starvation
GO:0002534--P:cytokine production involved in inflammatory response
GO:0050830--P:defense response to Gram-positive bacterium
GO:0006999--P:nuclear pore organization
GO:1904263--P:positive regulation of TORC1 signaling

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001926	Ailuropoda melanoleuca	96.11	2.00e-156	544.00
IUUC-Apl-003654	Anas platyrhynchos	97.19	4.00e-179	620.00
IUUC-Aca-004378	Anolis carolinensis	92.83	6.00e-173	599.00
IUUC-Ago-007816	Ashbya gossypii	33.00	3.00e-39	155.00
IUUC-Ame-011945	Astyanax mexicanus	83.33	4.00e-151	527.00
IUUC-Bta-013306	Bos taurus	92.57	2.00e-161	561.00
IUUC-Bdi-014594	Brachypodium distachyon	29.45	4.00e-31	128.00
IUUC-Bol-016565	Brassica oleracea	27.21	3.00e-28	118.00
IUUC-Cel-018235	Caenorhabditis elegans	40.70	1.00e-64	239.00
IUUC-Cja-018849	Callithrix jacchus	93.15	2.00e-159	555.00
IUUC-Cfa-020841	Canis familiaris	94.89	3.00e-152	533.00
IUUC-Cpo-021379	Cavia porcellus	91.64	5.00e-160	556.00
IUUC-Csa-023900	Chlorocebus sabaeus	93.44	4.00e-161	560.00
IUUC-Cho-024660	Choloepus hoffmanni	91.85	4.00e-169	586.00
IUUC-Cin-025471	Ciona intestinalis	57.99	3.00e-90	324.00
IUUC-Csv-026242	Ciona savignyi	59.53	4.00e-73	267.00
IUUC-Dre-028068	Danio rerio	80.50	1.00e-158	551.00
IUUC-Dno-029981	Dasypus novemcinctus	86.71	3.00e-146	511.00
IUUC-Dme-031763	Drosophila melanogaster	56.25	1.00e-94	339.00
IUUC-Ete-032243	Echinops telfairi	57.95	4.00e-90	324.00
IUUC-Eca-033425	Equus caballus	92.26	2.00e-160	557.00
IUUC-Eeu-035119	Erinaceus europaeus	72.94	1.00e-112	399.00
IUUC-Fca-036520	Felis catus	94.74	7.00e-166	576.00
IUUC-Fal-037234	Ficedula albicollis	95.38	0.00e+00	628.00
IUUC-Gmo-039013	Gadus morhua	84.74	2.00e-153	535.00
IUUC-Gga-041059	Gallus gallus	96.56	2.00e-178	618.00
IUUC-Gac-041337	Gasterosteus aculeatus	83.80	7.00e-149	519.00
IUUC-Ggo-044944	Gorilla gorilla	93.75	1.00e-172	598.00
IUUC-Hsa-046038	Homo sapiens	93.75	3.00e-173	600.00
IUUC-Hvu-047455	Hordeum vulgare	30.69	1.00e-32	132.00
IUUC-Itr-048858	Ictidomys tridecemlineatus	93.12	5.00e-160	556.00
IUUC-Kpa-049201	Komagataella pastoris	35.51	7.00e-39	154.00
IUUC-Lch-050466	Latimeria chalumnae	79.89	1.00e-161	562.00
IUUC-Lpe-051064	Leersia perrieri	31.03	2.00e-32	132.00
IUUC-Loc-052773	Lepisosteus oculatus	78.49	3.00e-151	527.00
IUUC-Laf-053409	Loxodonta africana	93.19	6.00e-162	563.00
IUUC-Meu-055958	Macropus eugenii	68.85	3.00e-120	424.00
IUUC-Mtr-057876	Medicago truncatula	29.64	8.00e-30	124.00
IUUC-Mga-059348	Meleagris gallopavo	95.64	9.00e-178	615.00
IUUC-Mmr-060977	Microcebus murinus	96.12	1.00e-111	394.00
IUUC-Mdo-061806	Monodelphis domestica	93.83	8.00e-174	602.00
IUUC-Mmu-064328	Mus musculus	90.71	2.00e-168	584.00
IUUC-Mac-064960	Musa acuminata	31.23	4.00e-28	118.00
IUUC-Mpu-066873	Mustela putorius furo	96.11	1.00e-156	545.00
IUUC-Mlu-067563	Myotis lucifugus	85.45	4.00e-156	543.00
IUUC-Nle-068977	Nomascus leucogenys	93.50	6.00e-174	602.00
IUUC-Opr-070773	Ochotona princeps	62.24	2.00e-84	305.00
IUUC-Ont-072644	Oreochromis niloticus	84.74	8.00e-154	536.00
IUUC-Oan-073098	Ornithorhynchus anatinus	93.52	8.00e-166	575.00
IUUC-Ocu-073911	Oryctolagus cuniculus	93.44	5.00e-172	597.00
IUUC-Obr-076089	Oryza brachyantha	29.26	3.00e-32	131.00
IUUC-Ogl-077279	Oryza glaberrima	29.62	7.00e-31	127.00
IUUC-Oin-079385	Oryza indica	29.47	1.00e-29	123.00
IUUC-Ome-081809	Oryza meridionalis	29.97	9.00e-31	128.00
IUUC-Oru-084801	Oryza rufipogon	29.62	4.00e-31	128.00
IUUC-Osa-085790	Oryza sativa	29.62	7.00e-31	127.00
IUUC-Ola-087096	Oryzias latipes	82.81	1.00e-147	515.00
IUUC-Oga-088798	Otolemur garnettii	92.81	4.00e-171	593.00
IUUC-Oar-090298	Ovis aries	93.12	7.00e-163	569.00
IUUC-Ptr-091074	Pan troglodytes	93.81	5.00e-174	603.00
IUUC-Pan-092013	Papio anubis	95.85	6.00e-118	416.00
IUUC-Pma-094288	Petromyzon marinus	84.97	3.00e-84	303.00
IUUC-Ppa-095228	Physcomitrella patens	32.75	2.00e-37	149.00
IUUC-Pfo-096384	Poecilia formosa	83.49	2.00e-151	528.00
IUUC-Pab-098629	Pongo abelii	93.50	6.00e-174	602.00
IUUC-Pop-099015	Populus trichocarpa	29.86	6.00e-30	124.00
IUUC-Pca-100322	Procavia capensis	68.75	8.00e-108	383.00
IUUC-Ppe-101303	Prunus persica	28.99	5.00e-31	127.00
IUUC-Pva-102861	Pteropus vampyrus	92.19	4.00e-159	553.00
IUUC-Rno-104895	Rattus norvegicus	84.75	1.00e-179	624.00
IUUC-Sce-106420	Saccharomyces cerevisiae	31.76	3.00e-43	168.00
IUUC-Sha-106829	Sarcophilus harrisii	93.52	2.00e-173	601.00
IUUC-Sja-107923	Schizosaccharomyces japonicus	37.82	1.00e-52	199.00
IUUC-Spo-108184	Schizosaccharomyces pombe	37.42	2.00e-52	198.00
IUUC-Smo-109282	Selaginella moellendorffii	34.06	3.00e-35	141.00
IUUC-Sit-110393	Setaria italica	29.79	5.00e-31	127.00
IUUC-Sly-111125	Solanum lycopersicum	30.50	2.00e-32	132.00
IUUC-Stu-112745	Solanum tuberosum	26.79	9.00e-29	120.00
IUUC-Sar-113279	Sorex araneus	92.81	9.00e-160	555.00
IUUC-Sbi-114110	Sorghum bicolor	30.80	1.00e-32	132.00
IUUC-Ssc-115589	Sus scrofa	91.36	8.00e-170	588.00
IUUC-Tgu-117523	Taeniopygia guttata	96.25	4.00e-178	616.00
IUUC-Tru-117985	Takifugu rubripes	85.00	2.00e-155	543.00
IUUC-Tsy-118913	Tarsius syrichta	93.07	2.00e-158	551.00
IUUC-Tni-120670	Tetraodon nigroviridis	85.09	6.00e-155	539.00
IUUC-Tae-122796	Triticum aestivum	30.34	4.00e-32	131.00
IUUC-Tur-126582	Triticum urartu	29.49	2.00e-29	122.00
IUUC-Tme-126885	Tuber melanosporum	34.20	1.00e-43	169.00
IUUC-Tbe-127344	Tupaia belangeri	72.19	4.00e-109	387.00
IUUC-Ttr-128347	Tursiops truncatus	93.12	4.00e-160	556.00
IUUC-Vpa-130656	Vicugna pacos	95.05	6.00e-155	540.00
IUUC-Vvi-131103	Vitis vinifera	27.53	1.00e-30	127.00
IUUC-Xtr-132736	Xenopus tropicalis	90.09	3.00e-167	580.00
IUUC-Xma-133678	Xiphophorus maculatus	83.80	2.00e-152	531.00
IUUC-Yli-134659	Yarrowia lipolytica	38.57	5.00e-50	191.00
IUUC-Zma-135774	Zea mays	30.34	6.00e-32	130.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence