iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000086906.2	ENSDART00000170360.1	ENSDARP00000135522.1
ENSDARG00000086906.2	ENSDART00000162687.1	ENSDARP00000139750.1
ENSDARG00000086906.2	ENSDART00000127729.2	ENSDARP00000110215.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Jab_MPN	3.90e-49	167.0	254	378

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Jab_MPN

   S: 6    vvlpkrllkkflelsdvkiavavevyGlllgelvkdkevktvvlvpkqlagvgsvqvenvedvfdlldqeGlivlGWiHthpeelkfls 94
           + +p +l+ kfl+l++ ++ +ave++G+l+g l ++ ++ t+v+vpkq +g +++++en+e++f+++dq  li+lGWiHthp++++fls
   Q: 254  IAVPAELCGKFLRLANNNTIRAVETCGILCGTLNRNAFTVTHVVVPKQCGGPDYCDTENEEELFLVQDQYNLITLGWIHTHPTQTAFLS 342
           679************************************************************************************** PP
   S: 95   svdvathsslealkkrsvaivsspkfqelsafkltd 130
           svd++th+s+++++++s+aiv+spkf ++++f+ltd
   Q: 343  SVDLHTHCSYQMMLPESIAIVCSPKFNQTGYFRLTD 378
           ***********************************9 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MMLDHADVSL SPEERVRALT KKGGAVEMNE SVPLRRYFRS GMEMIRMAHV YAEEGNTEHA 60
FVLYNKYITL FIEKLPKHPE YKLSNIPEKK EILRKLKDTA FPQAEQLKKL LLRRYEREHA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTCAAACCG GAAGAGGAAG TAAGTGAGAG ATTAACGCGA AAGGGGATGG AGACACAACA 60
CAGACCCACA GAGAAACACT GATATGGACG AGTTTCACAG CTAATGTGAC TGAAAGCTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000555--JAMM/MPN+_dom
IPR007330--MIT
IPR015063--USP8_dimer

Pfam

PF01398--JAB
PF08969--USP8_dimer

SMART

SM00232--JAB_MPN

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002473	Amborella trichopoda	43.63	6.00e-41	162.00
IUUC-Ame-011255	Astyanax mexicanus	78.29	0.00e+00	629.00
IUUC-Gmo-038927	Gadus morhua	78.76	1.00e-91	330.00
IUUC-Gac-041538	Gasterosteus aculeatus	68.87	2.00e-165	575.00
IUUC-Mla-058952	Melampsora laricipopulina	50.00	3.00e-11	59.70
IUUC-Opu-083914	Oryza punctata	45.79	2.00e-42	167.00
IUUC-Ppe-101461	Prunus persica	46.15	3.00e-44	172.00
IUUC-Ptt-103871	Puccinia triticina	47.68	2.00e-32	133.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence