iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131363

UUCD1 version

UUC-ViV-00397

Ensembl Protein ID

VIT_17s0000g08690.t01

UniProt Accession

F6GSM1; F6GSM1_VITVI

Genbank Protein ID

CCB42968.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN594950

Gene Name

VIT_17s0000g08690

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_17s0000g08690	VIT_17s0000g08690.t01	VIT_17s0000g08690.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.80e-15	55.7	216	249

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           H+ +v+c+a   sd +l+++Gs+D  +++WD+r+
   Q: 216  HKMGVCCIAKspSDpNLVLTGSYDEHLRLWDVRS 249
           666799997678889****************997 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MLYRMDVAHC YLEGNADAVE FCPHDSYHHV LAASTYTLQE GDQPSRSGSV SLFNIDAEFG 60
RLELGHRVDT AGIFDIKWSP AGSTAVPSLA QADADGYLRL YGLESGSSGA EALGGSLTEI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTATATC GTATGCTTCA TTTAACAGTA CGTCAAATTT TTGTTCACCA CCTGTTTGAT 60
AAAATGCCTA AGAGATTTAC AATGTGGTGT TTACCGTGTT TGCCAATGAT GTAGGCATGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000566	Aegilops tauschii	58.04	1.00e-82	298.00
IUUC-Aml-001799	Ailuropoda melanoleuca	36.20	6.00e-42	164.00
IUUC-Atr-002540	Amborella trichopoda	59.91	1.00e-81	294.00
IUUC-Apl-003582	Anas platyrhynchos	36.36	1.00e-43	169.00
IUUC-Aca-004275	Anolis carolinensis	40.56	3.00e-41	161.00
IUUC-Aly-005425	Arabidopsis lyrata	63.79	2.00e-128	451.00
IUUC-Ath-007434	Arabidopsis thaliana	63.27	3.00e-127	446.00
IUUC-Ago-007782	Ashbya gossypii	32.66	6.00e-22	97.40
IUUC-Ang-009512	Aspergillus niger	25.06	3.00e-12	65.50
IUUC-Ame-011276	Astyanax mexicanus	46.01	3.00e-37	147.00
IUUC-Bta-012985	Bos taurus	33.14	4.00e-40	158.00
IUUC-Bdi-014568	Brachypodium distachyon	55.97	6.00e-105	372.00
IUUC-Bol-016236	Brassica oleracea	64.37	2.00e-130	457.00
IUUC-Bra-017012	Brassica rapa	63.87	3.00e-124	437.00
IUUC-Cel-018435	Caenorhabditis elegans	28.62	4.00e-14	71.20
IUUC-Cja-018952	Callithrix jacchus	33.53	4.00e-39	154.00
IUUC-Cfa-021210	Canis familiaris	34.52	9.00e-41	160.00
IUUC-Cpo-022017	Cavia porcellus	34.24	3.00e-41	162.00
IUUC-Cre-022584	Chlamydomonas reinhardtii	47.79	5.00e-36	142.00
IUUC-Csa-023897	Chlorocebus sabaeus	35.03	3.00e-38	151.00
IUUC-Cho-024708	Choloepus hoffmanni	47.47	5.00e-23	100.00
IUUC-Cin-025485	Ciona intestinalis	35.59	5.00e-55	207.00
IUUC-Cne-026845	Cryptococcus neoformans	33.42	3.00e-46	177.00
IUUC-Cme-027194	Cyanidioschyzon merolae	27.86	2.00e-19	89.00
IUUC-Dre-028581	Danio rerio	40.06	7.00e-51	193.00
IUUC-Dno-029285	Dasypus novemcinctus	33.13	3.00e-43	168.00
IUUC-Dor-030566	Dipodomys ordii	34.63	1.00e-41	162.00
IUUC-Dme-031714	Drosophila melanogaster	35.92	3.00e-49	188.00
IUUC-Ete-032317	Echinops telfairi	32.41	7.00e-33	133.00
IUUC-Eca-033341	Equus caballus	44.70	4.00e-25	105.00
IUUC-Eeu-034890	Erinaceus europaeus	32.14	1.00e-39	156.00
IUUC-Fca-035966	Felis catus	35.21	3.00e-42	165.00
IUUC-Fal-037338	Ficedula albicollis	35.31	4.00e-49	187.00
IUUC-Gmo-039487	Gadus morhua	41.10	5.00e-56	210.00
IUUC-Gga-040691	Gallus gallus	34.40	1.00e-44	172.00
IUUC-Gac-041912	Gasterosteus aculeatus	40.90	5.00e-52	197.00
IUUC-Gma-042905	Glycine max	68.97	1.00e-143	501.00
IUUC-Ggo-045003	Gorilla gorilla	33.63	4.00e-42	164.00
IUUC-Hsa-046840	Homo sapiens	34.23	1.00e-43	169.00
IUUC-Hvu-047291	Hordeum vulgare	57.50	7.00e-117	412.00
IUUC-Itr-048072	Ictidomys tridecemlineatus	35.22	1.00e-38	152.00
IUUC-Kpa-049296	Komagataella pastoris	27.65	7.00e-24	103.00
IUUC-Lch-049627	Latimeria chalumnae	36.34	2.00e-49	189.00
IUUC-Lpe-051462	Leersia perrieri	57.63	2.00e-110	391.00
IUUC-Loc-052917	Lepisosteus oculatus	38.86	8.00e-52	196.00
IUUC-Laf-054268	Loxodonta africana	35.21	9.00e-45	173.00
IUUC-Mcc-055309	Macaca mulatta	34.23	3.00e-42	165.00
IUUC-Meu-055985	Macropus eugenii	35.31	1.00e-42	165.00
IUUC-Mtr-058767	Medicago truncatula	70.67	1.00e-148	518.00
IUUC-Mla-059032	Melampsora laricipopulina	33.03	7.00e-44	170.00
IUUC-Mga-059799	Meleagris gallopavo	42.16	7.00e-37	147.00
IUUC-Mvi-060258	Microbotryum violaceum	31.96	1.00e-42	166.00
IUUC-Mmr-061425	Microcebus murinus	34.43	6.00e-42	164.00
IUUC-Mdo-062620	Monodelphis domestica	36.18	8.00e-48	183.00
IUUC-Mmu-063473	Mus musculus	35.12	2.00e-44	172.00
IUUC-Mac-065376	Musa acuminata	61.34	1.00e-128	451.00
IUUC-Mpu-066124	Mustela putorius furo	33.04	1.00e-39	156.00
IUUC-Mlu-067844	Myotis lucifugus	34.77	4.00e-43	167.00
IUUC-Ont-071523	Oreochromis niloticus	42.11	1.00e-57	216.00
IUUC-Oan-072754	Ornithorhynchus anatinus	35.00	9.00e-36	143.00
IUUC-Ocu-074659	Oryctolagus cuniculus	40.11	8.00e-32	129.00
IUUC-Oba-075786	Oryza barthii	61.09	2.00e-76	277.00
IUUC-Obr-076077	Oryza brachyantha	57.26	5.00e-107	379.00
IUUC-Ogl-077449	Oryza glaberrima	58.40	4.00e-110	390.00
IUUC-Ogu-078217	Oryza glumaepatula	58.40	6.00e-110	389.00
IUUC-Oin-079292	Oryza indica	58.40	3.00e-110	390.00
IUUC-Olo-080599	Oryza longistaminata	60.17	8.00e-80	288.00
IUUC-Ome-081740	Oryza meridionalis	58.72	1.00e-107	382.00
IUUC-Oni-082582	Oryza nivara	58.40	4.00e-110	390.00
IUUC-Opu-083166	Oryza punctata	57.06	1.00e-107	382.00
IUUC-Oru-084514	Oryza rufipogon	56.97	1.00e-99	355.00
IUUC-Osa-086226	Oryza sativa	58.40	3.00e-110	390.00
IUUC-Olu-087798	Ostreococcus lucimarinus	45.56	2.00e-38	150.00
IUUC-Oga-088820	Otolemur garnettii	33.63	2.00e-41	162.00
IUUC-Oar-089825	Ovis aries	31.01	3.00e-32	132.00
IUUC-Pan-091766	Papio anubis	31.47	3.00e-37	148.00
IUUC-Psi-093167	Pelodiscus sinensis	37.43	2.00e-50	192.00
IUUC-Pno-095089	Phaeosphaeria nodorum	28.40	1.00e-18	86.70
IUUC-Ppa-095299	Physcomitrella patens	45.89	5.00e-82	296.00
IUUC-Pfo-096456	Poecilia formosa	40.85	3.00e-57	214.00
IUUC-Pab-097864	Pongo abelii	42.86	5.00e-33	133.00
IUUC-Pop-100043	Populus trichocarpa	73.72	4.00e-117	413.00
IUUC-Ppe-101556	Prunus persica	74.93	3.00e-156	543.00
IUUC-Pva-102281	Pteropus vampyrus	35.19	2.00e-42	166.00
IUUC-Pgr-103459	Puccinia graminis	34.78	5.00e-30	123.00
IUUC-Rno-105659	Rattus norvegicus	35.76	1.00e-42	166.00
IUUC-Sha-107077	Sarcophilus harrisii	36.53	9.00e-48	183.00
IUUC-Smo-109371	Selaginella moellendorffii	45.53	4.00e-78	283.00
IUUC-Sit-109789	Setaria italica	47.86	2.00e-85	307.00
IUUC-Sly-110953	Solanum lycopersicum	72.44	3.00e-99	353.00
IUUC-Stu-112698	Solanum tuberosum	71.76	4.00e-151	526.00
IUUC-Sbi-114197	Sorghum bicolor	57.31	2.00e-109	387.00
IUUC-Sre-115167	Sporisorium reilianum	38.14	7.00e-32	130.00
IUUC-Tgu-116657	Taeniopygia guttata	42.37	8.00e-37	145.00
IUUC-Tru-118578	Takifugu rubripes	35.50	4.00e-53	201.00
IUUC-Tca-121611	Theobroma cacao	74.14	1.00e-152	531.00
IUUC-Tae-123970	Triticum aestivum	56.15	7.00e-115	405.00
IUUC-Tur-126298	Triticum urartu	58.04	8.00e-83	298.00
IUUC-Ttr-128302	Tursiops truncatus	32.89	2.00e-34	138.00
IUUC-Uma-129644	Ustilago maydis	39.60	3.00e-35	142.00
IUUC-Xtr-132976	Xenopus tropicalis	35.98	3.00e-45	174.00
IUUC-Xma-133286	Xiphophorus maculatus	41.34	8.00e-58	216.00
IUUC-Yli-134664	Yarrowia lipolytica	29.69	2.00e-30	125.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence