iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Oga-088681

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03140520

Gene Name

WDR83

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000012803.2	ENSOGAT00000012806.2	ENSOGAP00000011475.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-29	101.0	107	142
UBD/Beta-Prp	1.10e-46	159.3	17	162

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH+++v+ ++f  + t ++sGs D +i++WD r+ +
   Q: 107  GHAGKVNTVQFnEEaTVILSGSIDSSIHCWDCRSRR 142
           8**********54489***************99866 PP

UBD/Beta-Prp

   S: 128  cleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvr 216
            l+ tl+  +g+v+ v+++ dgn++ +++ D+t++lW+  +g llrt +g h   v   + + +  +l sg+ d+ v lwd+ +g++vr
   Q: 17   RLK-TLNCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGMLLRTYSG-HGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVR 103
           455.7788888999999999999999999999999999999999999998.99999999866556789999999999999999999999 PP
   S: 217  tlnghtdnvksvrfspnderlvsgssDgsiriWdlrsg..dllktlqlhnssvisvavl 273
           +++gh   v+ v+f ++ + ++sgs D si +Wd+rs+  ++++ l   ++ ++sv+vl
   Q: 104  KFRGHAGKVNTVQFNEEATVILSGSIDSSIHCWDCRSRrpEPVQILDEARDGISSVKVL 162
           99999999999999999999999999999999999998223466777777777777775 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

MAFPEPKPRA PELPQKRLKT LNCGQGAVRA VRFNVDGNYC LTCGSDKTLK LWNPLRGMLL 60
RTYSGHGYEV LDAAGSFDNS SLCSGGGDKA VVLWDVASGQ VVRKFRGHAG KVNTVQFNEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTTTC CTGAGCCAAA GCCGCGGGCC CCGGAGCTGC CGCAGAAACG GTTAAAGACG 60
CTTAACTGCG GGCAAGGGGC TGTGCGAGCC GTGCGATTTA ATGGTGAGCG CCCTCTTCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005737--C:cytoplasm
GO:0000398--P:mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002160	Ailuropoda melanoleuca	94.21	1.00e-174	605.00
IUUC-Atr-002647	Amborella trichopoda	47.80	6.00e-87	313.00
IUUC-Aca-004948	Anolis carolinensis	77.88	4.00e-142	497.00
IUUC-Aly-006489	Arabidopsis lyrata	50.34	1.00e-81	296.00
IUUC-Ath-007099	Arabidopsis thaliana	50.34	2.00e-81	295.00
IUUC-Acl-008374	Aspergillus clavatus	37.33	7.00e-49	187.00
IUUC-Afl-008506	Aspergillus flavus	38.00	4.00e-51	194.00
IUUC-Afu-009098	Aspergillus fumigatus	33.23	2.00e-43	169.00
IUUC-Ang-009705	Aspergillus niger	34.19	8.00e-46	177.00
IUUC-Aor-010031	Aspergillus oryzae	38.00	4.00e-51	194.00
IUUC-Ame-011056	Astyanax mexicanus	70.79	9.00e-138	482.00
IUUC-Bgr-012109	Blumeria graminis	40.49	8.00e-55	207.00
IUUC-Bta-012476	Bos taurus	92.70	6.00e-174	602.00
IUUC-Bci-013860	Botrytis cinerea	35.02	2.00e-45	176.00
IUUC-Bdi-014565	Brachypodium distachyon	48.14	2.00e-84	305.00
IUUC-Bol-016204	Brassica oleracea	50.00	3.00e-81	294.00
IUUC-Bra-018093	Brassica rapa	50.34	4.00e-81	294.00
IUUC-Cel-018500	Caenorhabditis elegans	48.81	2.00e-84	305.00
IUUC-Cja-019279	Callithrix jacchus	94.23	5.00e-164	569.00
IUUC-Cfa-020516	Canis familiaris	94.53	2.00e-175	607.00
IUUC-Cpo-021427	Cavia porcellus	91.05	2.00e-163	567.00
IUUC-Cre-022775	Chlamydomonas reinhardtii	46.15	9.00e-75	273.00
IUUC-Csa-023449	Chlorocebus sabaeus	93.59	7.00e-164	569.00
IUUC-Cin-025637	Ciona intestinalis	57.77	4.00e-106	377.00
IUUC-Cgl-026458	Colletotrichum gloeosporioides	37.15	5.00e-51	194.00
IUUC-Cne-026994	Cryptococcus neoformans	35.18	4.00e-49	188.00
IUUC-Dre-028239	Danio rerio	72.88	2.00e-129	454.00
IUUC-Dno-029408	Dasypus novemcinctus	91.64	2.00e-170	591.00
IUUC-Dor-030684	Dipodomys ordii	91.58	3.00e-107	381.00
IUUC-Dse-031344	Dothistroma septosporum	44.78	5.00e-53	201.00
IUUC-Dme-031634	Drosophila melanogaster	47.57	2.00e-77	282.00
IUUC-Ete-033126	Echinops telfairi	85.21	1.00e-155	542.00
IUUC-Eca-034356	Equus caballus	84.13	1.00e-150	525.00
IUUC-Eeu-035196	Erinaceus europaeus	91.12	1.00e-77	282.00
IUUC-Fca-036231	Felis catus	93.57	6.00e-174	602.00
IUUC-Fox-038076	Fusarium oxysporum	36.36	1.00e-52	199.00
IUUC-Fso-038093	Fusarium solani	34.98	1.00e-44	173.00
IUUC-Gmo-039056	Gadus morhua	70.74	3.00e-130	457.00
IUUC-Ggr-039981	Gaeumannomyces graminis	34.04	3.00e-43	169.00
IUUC-Gga-041042	Gallus gallus	75.24	1.00e-145	509.00
IUUC-Gac-042638	Gasterosteus aculeatus	71.57	2.00e-133	468.00
IUUC-Gma-042689	Glycine max	50.00	4.00e-88	317.00
IUUC-Ggo-044720	Gorilla gorilla	94.55	4.00e-165	573.00
IUUC-Hsa-046056	Homo sapiens	94.23	5.00e-165	573.00
IUUC-Hvu-047675	Hordeum vulgare	45.71	4.00e-82	298.00
IUUC-Itr-048733	Ictidomys tridecemlineatus	91.78	4.00e-167	580.00
IUUC-Lch-050634	Latimeria chalumnae	75.99	3.00e-130	457.00
IUUC-Lpe-051470	Leersia perrieri	48.14	3.00e-84	304.00
IUUC-Loc-052452	Lepisosteus oculatus	75.08	9.00e-133	466.00
IUUC-Lma-053235	Leptosphaeria maculans	41.20	1.00e-26	113.00
IUUC-Laf-054315	Loxodonta africana	92.93	2.00e-162	564.00
IUUC-Mcc-054923	Macaca mulatta	93.91	1.00e-164	572.00
IUUC-Mor-056936	Magnaporthe oryzae	37.84	2.00e-45	176.00
IUUC-Mtr-058595	Medicago truncatula	50.52	5.00e-88	317.00
IUUC-Mla-058902	Melampsora laricipopulina	42.08	2.00e-58	219.00
IUUC-Mvi-060471	Microbotryum violaceum	42.91	2.00e-69	255.00
IUUC-Mmr-061665	Microcebus murinus	94.21	2.00e-175	607.00
IUUC-Mdo-062750	Monodelphis domestica	81.98	2.00e-134	471.00
IUUC-Mmu-063750	Mus musculus	91.32	8.00e-172	595.00
IUUC-Mac-065441	Musa acuminata	49.66	3.00e-88	318.00
IUUC-Mpu-066863	Mustela putorius furo	93.25	4.00e-173	600.00
IUUC-Mlu-067645	Myotis lucifugus	92.93	3.00e-172	597.00
IUUC-Nfi-068549	Neosartorya fischeri	36.04	6.00e-48	184.00
IUUC-Ncr-068816	Neurospora crassa	34.80	7.00e-41	161.00
IUUC-Nle-069457	Nomascus leucogenys	94.55	6.00e-165	573.00
IUUC-Opr-070874	Ochotona princeps	89.04	2.00e-73	268.00
IUUC-Ont-071674	Oreochromis niloticus	72.12	5.00e-120	423.00
IUUC-Oan-073391	Ornithorhynchus anatinus	76.83	5.00e-148	516.00
IUUC-Ocu-074186	Oryctolagus cuniculus	91.64	2.00e-165	574.00
IUUC-Oba-075414	Oryza barthii	49.10	1.00e-81	296.00
IUUC-Obr-076739	Oryza brachyantha	47.12	7.00e-83	300.00
IUUC-Ogl-076962	Oryza glaberrima	47.78	2.00e-83	302.00
IUUC-Ogu-078831	Oryza glumaepatula	48.12	1.00e-83	302.00
IUUC-Oin-079985	Oryza indica	47.78	2.00e-83	302.00
IUUC-Ome-081333	Oryza meridionalis	47.25	3.00e-76	278.00
IUUC-Oni-082558	Oryza nivara	47.78	2.00e-83	302.00
IUUC-Opu-084091	Oryza punctata	48.47	2.00e-85	308.00
IUUC-Oru-085253	Oryza rufipogon	47.97	5.00e-78	284.00
IUUC-Osa-086077	Oryza sativa	47.78	2.00e-83	302.00
IUUC-Ola-086946	Oryzias latipes	72.12	2.00e-135	474.00
IUUC-Olu-087604	Ostreococcus lucimarinus	39.68	3.00e-53	201.00
IUUC-Oar-089913	Ovis aries	91.75	1.00e-170	592.00
IUUC-Ptr-091343	Pan troglodytes	94.23	2.00e-163	568.00
IUUC-Pan-092078	Papio anubis	93.59	7.00e-164	569.00
IUUC-Psi-093190	Pelodiscus sinensis	78.27	9.00e-151	525.00
IUUC-Pno-095078	Phaeosphaeria nodorum	39.13	7.00e-52	197.00
IUUC-Ppa-095777	Physcomitrella patens	48.48	1.00e-87	316.00
IUUC-Pfo-097153	Poecilia formosa	73.60	5.00e-128	450.00
IUUC-Pab-098307	Pongo abelii	93.29	1.00e-161	561.00
IUUC-Pop-099315	Populus trichocarpa	50.85	2.00e-82	298.00
IUUC-Pca-100538	Procavia capensis	91.45	6.00e-145	506.00
IUUC-Ppe-101632	Prunus persica	47.80	9.00e-87	313.00
IUUC-Pva-102484	Pteropus vampyrus	94.53	4.00e-175	606.00
IUUC-Pgr-103495	Puccinia graminis	39.56	1.00e-61	229.00
IUUC-Ptt-103975	Puccinia triticina	39.19	4.00e-60	224.00
IUUC-Pte-104354	Pyrenophora teres	36.82	7.00e-41	160.00
IUUC-Pyt-104692	Pyrenophora triticirepentis	37.55	1.00e-40	160.00
IUUC-Rno-105655	Rattus norvegicus	91.00	3.00e-171	593.00
IUUC-Sha-107130	Sarcophilus harrisii	81.43	2.00e-110	391.00
IUUC-Sja-107933	Schizosaccharomyces japonicus	38.91	2.00e-57	215.00
IUUC-Spo-108131	Schizosaccharomyces pombe	38.30	6.00e-57	214.00
IUUC-Ssl-108405	Sclerotinia sclerotiorum	35.10	7.00e-46	177.00
IUUC-Smo-109004	Selaginella moellendorffii	47.12	4.00e-79	287.00
IUUC-Sit-110508	Setaria italica	48.81	4.00e-85	307.00
IUUC-Sly-111093	Solanum lycopersicum	47.97	1.00e-79	289.00
IUUC-Stu-112380	Solanum tuberosum	47.97	1.00e-79	289.00
IUUC-Sar-113127	Sorex araneus	87.32	5.00e-70	257.00
IUUC-Sbi-114461	Sorghum bicolor	47.80	1.00e-83	302.00
IUUC-Sre-115020	Sporisorium reilianum	39.85	3.00e-40	160.00
IUUC-Ssc-115632	Sus scrofa	94.21	1.00e-174	605.00
IUUC-Tru-118039	Takifugu rubripes	69.61	3.00e-125	441.00
IUUC-Tsy-119239	Tarsius syrichta	95.86	6.00e-94	337.00
IUUC-Tni-120097	Tetraodon nigroviridis	68.25	5.00e-122	430.00
IUUC-Tca-121695	Theobroma cacao	50.85	1.00e-90	326.00
IUUC-Tre-122182	Trichoderma reesei	37.10	9.00e-50	190.00
IUUC-Tvi-122429	Trichoderma virens	37.00	1.00e-52	199.00
IUUC-Tae-125136	Triticum aestivum	49.49	1.00e-86	312.00
IUUC-Tur-126216	Triticum urartu	49.49	8.00e-86	310.00
IUUC-Tme-127030	Tuber melanosporum	42.59	2.00e-60	225.00
IUUC-Tbe-127686	Tupaia belangeri	92.06	3.00e-100	357.00
IUUC-Ttr-128770	Tursiops truncatus	92.63	4.00e-172	596.00
IUUC-Uma-129446	Ustilago maydis	34.42	7.00e-35	142.00
IUUC-Vda-129680	Verticillium dahliae	38.37	4.00e-41	161.00
IUUC-Vvi-131292	Vitis vinifera	51.19	1.00e-89	322.00
IUUC-Xtr-132204	Xenopus tropicalis	75.24	9.00e-144	502.00
IUUC-Xma-133727	Xiphophorus maculatus	72.12	6.00e-128	450.00
IUUC-Zma-135908	Zea mays	47.80	3.00e-78	285.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence