iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-108982

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377569

Gene Name

SELMODRAFT_80929

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_80929	EFJ34955	EFJ34955

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.10e-33	112.4	492	524
UBD/Beta-Prp	1.80e-63	215.2	277	448

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlr 31
           gH+++v++laf  +d +l+s+s+D+t+++WD+ 
   Q: 492  GHEGPVHGLAFspTDEFLASSSWDKTVRLWDVF 524
           8***********555****************85 PP

UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGsh.drtirvwdletgqcleetlsghdgvvncvvvhp 147
           l  + +  +a+++++  +i v g + ++  ++ + +++c+h l+  ++++++  f+++g++++ G +    + vwd+++++ +   ++gh   vncv+++p
   Q: 277  LFHQHGRLSACDYHSGLNIVVAGFSSGVFGIYQMPDFTCIHLLSISKEKITTAVFNRTGNWVAFGCAkLGQLLVWDWRSETYIL-KQQGHYFDVNCVAYSP 376
           444555666777777777777777777777777777777777777777777777777777777775314566667777777776.6777777777777777 PP
   S: 148  dgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlng 220
           d++l+++G++D++v+lW+ ++g++  t+ + ht++v+ + f   ++ ++s+sldgtv+ wdl + +  rt++ 
   Q: 377  DSQLIATGADDNKVKLWNAASGFCFVTFAE-HTNAVTAVLFLAGSNAVLSASLDGTVRAWDLMRYRNFRTFTT 448
           777777777777777777777777777766.777777777777777777777777777777766555555554 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MNAYRFSNLV GAPYRGGNVA FAGGSAALVS PVGNRISVTE LRKSECWTLP VENGGDVSRV 60
AVSPNGALLL SIDASGRCIL VSLARRILLH RMSFKAPVTA LGFSPDGSLF AVAMGRLLQV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACGCTT ACAGGTTTAG CAATCTCGTG GGCGCCCCAT ATCGTGGGGG CAATGTCGCC 60
TTTGCCGGTG GGAGCGCCGC GCTGGTGTCG CCAGTAGGCA ATCGCATCTC TGTCACGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR003143--Cyt_cd1_C
IPR020472--G-protein_beta_WD-40_rep
IPR027145--PWP2
IPR011044--Quino_amine_DH_bsu
IPR011047--Quinoprotein_ADH-like_supfam
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_80929

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001932	Ailuropoda melanoleuca	42.63	0.00e+00	694.00
IUUC-Atr-003033	Amborella trichopoda	57.59	0.00e+00	1005.00
IUUC-Apl-003219	Anas platyrhynchos	43.91	0.00e+00	726.00
IUUC-Aly-006213	Arabidopsis lyrata	57.11	0.00e+00	1008.00
IUUC-Ath-006593	Arabidopsis thaliana	57.13	0.00e+00	1002.00
IUUC-Bta-012399	Bos taurus	43.59	0.00e+00	695.00
IUUC-Bdi-015028	Brachypodium distachyon	60.95	0.00e+00	1046.00
IUUC-Bol-016521	Brassica oleracea	57.51	0.00e+00	983.00
IUUC-Bra-017096	Brassica rapa	57.48	0.00e+00	986.00
IUUC-Cel-018690	Caenorhabditis elegans	33.33	9.00e-140	490.00
IUUC-Cja-019229	Callithrix jacchus	43.25	0.00e+00	701.00
IUUC-Csa-023436	Chlorocebus sabaeus	43.14	0.00e+00	699.00
IUUC-Cin-025397	Ciona intestinalis	40.94	4.00e-167	580.00
IUUC-Csv-026194	Ciona savignyi	39.78	1.00e-179	622.00
IUUC-Dme-032043	Drosophila melanogaster	38.63	7.00e-170	590.00
IUUC-Ete-033102	Echinops telfairi	46.92	6.00e-152	530.00
IUUC-Eca-033223	Equus caballus	42.74	0.00e+00	710.00
IUUC-Fca-035795	Felis catus	40.52	0.00e+00	631.00
IUUC-Gmo-039355	Gadus morhua	40.80	0.00e+00	678.00
IUUC-Gga-040907	Gallus gallus	49.25	4.00e-149	520.00
IUUC-Gac-042624	Gasterosteus aculeatus	41.14	0.00e+00	686.00
IUUC-Hsa-046145	Homo sapiens	43.48	0.00e+00	724.00
IUUC-Hvu-047416	Hordeum vulgare	60.58	0.00e+00	1032.00
IUUC-Itr-049083	Ictidomys tridecemlineatus	43.10	0.00e+00	723.00
IUUC-Kpa-049150	Komagataella pastoris	40.82	0.00e+00	662.00
IUUC-Lch-049460	Latimeria chalumnae	42.62	4.00e-176	610.00
IUUC-Lpe-050840	Leersia perrieri	59.64	0.00e+00	1046.00
IUUC-Loc-052733	Lepisosteus oculatus	42.48	0.00e+00	714.00
IUUC-Laf-054294	Loxodonta africana	44.70	0.00e+00	711.00
IUUC-Mcc-054624	Macaca mulatta	43.70	0.00e+00	718.00
IUUC-Meu-056665	Macropus eugenii	38.56	1.00e-130	459.00
IUUC-Mga-059207	Meleagris gallopavo	39.04	0.00e+00	627.00
IUUC-Mdo-062327	Monodelphis domestica	42.27	0.00e+00	689.00
IUUC-Mmu-063542	Mus musculus	42.47	0.00e+00	702.00
IUUC-Mac-065142	Musa acuminata	61.35	0.00e+00	1084.00
IUUC-Nle-068970	Nomascus leucogenys	43.50	0.00e+00	721.00
IUUC-Opr-070966	Ochotona princeps	54.15	8.00e-109	386.00
IUUC-Oan-072737	Ornithorhynchus anatinus	42.26	0.00e+00	677.00
IUUC-Oba-075794	Oryza barthii	59.50	0.00e+00	1028.00
IUUC-Ogl-077022	Oryza glaberrima	60.40	0.00e+00	1072.00
IUUC-Ogu-078757	Oryza glumaepatula	48.60	0.00e+00	782.00
IUUC-Oin-079813	Oryza indica	60.07	0.00e+00	1068.00
IUUC-Ome-081494	Oryza meridionalis	60.29	0.00e+00	1070.00
IUUC-Oni-082639	Oryza nivara	48.71	0.00e+00	782.00
IUUC-Oru-084883	Oryza rufipogon	48.48	0.00e+00	781.00
IUUC-Osa-086158	Oryza sativa	60.07	0.00e+00	1068.00
IUUC-Ola-086822	Oryzias latipes	42.31	0.00e+00	696.00
IUUC-Oga-088887	Otolemur garnettii	43.67	0.00e+00	693.00
IUUC-Oar-090110	Ovis aries	42.42	0.00e+00	654.00
IUUC-Ppa-095678	Physcomitrella patens	60.11	0.00e+00	1007.00
IUUC-Pop-099635	Populus trichocarpa	60.80	0.00e+00	1073.00
IUUC-Pca-100947	Procavia capensis	40.85	0.00e+00	654.00
IUUC-Ppe-101552	Prunus persica	60.78	0.00e+00	1110.00
IUUC-Sha-107264	Sarcophilus harrisii	41.40	3.00e-81	294.00
IUUC-Sly-111620	Solanum lycopersicum	71.81	0.00e+00	848.00
IUUC-Stu-112877	Solanum tuberosum	61.67	0.00e+00	1133.00
IUUC-Ssc-115931	Sus scrofa	44.85	1.00e-86	312.00
IUUC-Tsy-119401	Tarsius syrichta	46.12	2.00e-115	409.00
IUUC-Tni-120046	Tetraodon nigroviridis	41.67	0.00e+00	673.00
IUUC-Tae-125397	Triticum aestivum	68.11	0.00e+00	647.00
IUUC-Tur-126650	Triticum urartu	62.66	0.00e+00	958.00
IUUC-Tbe-128102	Tupaia belangeri	45.59	3.00e-133	468.00
IUUC-Ttr-128259	Tursiops truncatus	43.21	0.00e+00	695.00
IUUC-Vvi-131572	Vitis vinifera	62.81	0.00e+00	1105.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence