iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016819

Ensembl Protein ID

Bra016539.1-P

UniProt Accession

M4DJ61; M4DJ61_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra016539	Bra016539.1	Bra016539.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.40e-18	65.1	121	152

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf....sdtllvsGsdDgtikvWDl 30
           H+++v++l+f    + + l+sG dDgti +WDl
   Q: 121  HKGPVRALEFnvisP-NQLASGDDDGTICIWDL 152
           9***********954.99**************8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSCIKRVDRS AYVAMAPEAP FMAAGTMAGA VDLSFSSSSN LEIFELDFNS EDHEMKLLGQ 60
CSSSERFTRL AWGSYGSGSE ETPYGLIAGG LVDGNIGLRN PITLIRSESN ESAHVRYLSK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTTGCA TAAAGAGAGT TGATAGATCC GCGTACGTTG CCATGGCACC AGAAGCTCCG 60
TTCATGGCTG CCGGAACGAT GGCCGGAGCC GTTGATCTGT CTTTCAGCTC ATCCTCCAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR024298--ACE1_Sec16_Sec31
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12931--Sec16_C
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006509	Arabidopsis lyrata	62.70	0.00e+00	952.00
IUUC-Ath-006685	Arabidopsis thaliana	69.06	0.00e+00	1234.00
IUUC-Bol-015526	Brassica oleracea	93.00	0.00e+00	1669.00
IUUC-Ete-032816	Echinops telfairi	27.62	2.00e-60	227.00
IUUC-Gmo-039063	Gadus morhua	31.97	4.00e-101	362.00
IUUC-Gac-042083	Gasterosteus aculeatus	32.06	2.00e-103	370.00
IUUC-Ola-087264	Oryzias latipes	31.60	2.00e-105	377.00
IUUC-Pva-102904	Pteropus vampyrus	31.11	2.00e-97	350.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence