iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pfo-097042

Ensembl Protein ID

ENSPFOP00000019584.2

UniProt Accession

A0A087YNI1; A0A087YNI1_POEFO

Genbank Protein ID

ENSPFOP00000019584

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AYCK01004487

Gene Name

STRN (1 of many)

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPFOG00000019463.2	ENSPFOT00000019606.2	ENSPFOP00000019584.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-28	98.6	567	597
UBD/Beta-Prp	8.50e-48	163.6	458	649

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gHtdsv++l + s   +l+s+s Dgt+k+WD
   Q: 567  GHTDSVWGLVYsSAhQRLLSCSADGTVKLWD 597
           8********99743689************** PP

UBD/Beta-Prp

   S: 47   slsgheaevtavkfspdgkilvtgseDrtikvwdls...........tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdle 124
           +l +h ++++a++f+p +++l+t+seD+t+k w+l+           + ++++t+++h   vls+ +s +g+   sG+ d ti++w+++
   Q: 458  TLRSHFDGIRALTFHPVEPVLITASEDHTLKMWNLQktapakkstslDVEPIYTFRAHRGAVLSVVMSSTGEQCFSGGVDGTIQCWNTP 546
           7999**********************************************************************************998 PP
   S: 125  tgqclee..........tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgk.llrtltgghtdsvysls..fdsngkelvsgsl 200
           +                 lsgh+++v+++v+++  + l s+s+D+tv+lWd +t +  l  + ++++  v s    + s+  +lv+  +
   Q: 547  NPNIDPYdsydpsvlrgELSGHTDSVWGLVYSSAHQRLLSCSADGTVKLWDANTTSpSLAVFNENKKLGVPSSVdlVCSEPAHLVTSFT 635
           86655445688999999****************99*****************65542789998888888877777878888******** PP
   S: 201  dgtvklwdlqtgec 214
           +g++ l++++t + 
   Q: 636  NGQIGLFNMETRQL 649
           *********98765 PP

Organism

Poecilia formosa

Protein Sequence
(Fasta)

MDEQAGPGVF FNNNNNSVLA GGGKGPLPDG DAGEAARAQY SIPGILHFLQ HEWARFEVER 60
AQWEVERAEL QAQIAFLQGE RKGQENLKKD LVRRIKMLEY ALKQERAKYH KLKYGTELNQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATTCAGTCT GTTGTGGGCG TGGTCTGTTG CTGTCGTCAC TGGATGACAG CTAGCTGTCA 60
GAAAGTGAGT TCATTCCCCG AGTCGAGTAG ACGGAGCCTT GTCGATAGTT TTTTTATTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR013258--Striatin_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08232--Striatin
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001899	Ailuropoda melanoleuca	73.47	0.00e+00	1054.00
IUUC-Apl-003927	Anas platyrhynchos	71.65	0.00e+00	914.00
IUUC-Aca-004933	Anolis carolinensis	68.60	0.00e+00	966.00
IUUC-Acl-008170	Aspergillus clavatus	26.51	5.00e-28	120.00
IUUC-Ame-011605	Astyanax mexicanus	75.38	0.00e+00	1097.00
IUUC-Bta-013077	Bos taurus	71.55	0.00e+00	1046.00
IUUC-Cel-018443	Caenorhabditis elegans	49.55	6.00e-103	368.00
IUUC-Cja-018973	Callithrix jacchus	71.30	0.00e+00	1040.00
IUUC-Cfa-020988	Canis familiaris	69.19	0.00e+00	923.00
IUUC-Cpo-022496	Cavia porcellus	71.55	0.00e+00	1047.00
IUUC-Csa-023829	Chlorocebus sabaeus	71.12	0.00e+00	1038.00
IUUC-Cin-025167	Ciona intestinalis	45.80	5.00e-177	614.00
IUUC-Dre-028560	Danio rerio	72.91	0.00e+00	1011.00
IUUC-Dno-029742	Dasypus novemcinctus	68.77	0.00e+00	1014.00
IUUC-Dor-030721	Dipodomys ordii	67.09	0.00e+00	950.00
IUUC-Dse-031486	Dothistroma septosporum	26.56	1.00e-34	141.00
IUUC-Dme-032158	Drosophila melanogaster	62.40	1.00e-135	477.00
IUUC-Eca-033760	Equus caballus	72.27	0.00e+00	962.00
IUUC-Eeu-034953	Erinaceus europaeus	79.95	0.00e+00	642.00
IUUC-Fca-036530	Felis catus	72.55	0.00e+00	982.00
IUUC-Gmo-039094	Gadus morhua	83.65	0.00e+00	794.00
IUUC-Gga-040132	Gallus gallus	73.83	0.00e+00	944.00
IUUC-Gac-041713	Gasterosteus aculeatus	87.97	0.00e+00	1243.00
IUUC-Ggo-045455	Gorilla gorilla	65.23	0.00e+00	900.00
IUUC-Hsa-046415	Homo sapiens	71.18	0.00e+00	1038.00
IUUC-Lch-050475	Latimeria chalumnae	73.47	0.00e+00	1093.00
IUUC-Loc-051859	Lepisosteus oculatus	80.25	0.00e+00	1156.00
IUUC-Laf-053537	Loxodonta africana	72.31	0.00e+00	1067.00
IUUC-Mcc-055817	Macaca mulatta	73.59	0.00e+00	1038.00
IUUC-Mla-058988	Melampsora laricipopulina	35.33	7.00e-64	239.00
IUUC-Mga-059694	Meleagris gallopavo	73.43	0.00e+00	920.00
IUUC-Mmr-060768	Microcebus murinus	72.38	0.00e+00	1053.00
IUUC-Mdo-061901	Monodelphis domestica	69.08	0.00e+00	1036.00
IUUC-Mmu-064154	Mus musculus	70.92	0.00e+00	1035.00
IUUC-Mpu-065827	Mustela putorius furo	67.52	0.00e+00	1039.00
IUUC-Mlu-067102	Myotis lucifugus	74.13	0.00e+00	1035.00
IUUC-Nle-070008	Nomascus leucogenys	72.69	0.00e+00	968.00
IUUC-Opr-071067	Ochotona princeps	45.01	7.00e-128	451.00
IUUC-Ont-072025	Oreochromis niloticus	90.91	0.00e+00	1298.00
IUUC-Oan-072950	Ornithorhynchus anatinus	74.08	0.00e+00	922.00
IUUC-Ocu-074316	Oryctolagus cuniculus	72.41	0.00e+00	952.00
IUUC-Ola-087279	Oryzias latipes	84.33	0.00e+00	1174.00
IUUC-Oga-088284	Otolemur garnettii	71.30	0.00e+00	1057.00
IUUC-Oar-090304	Ovis aries	71.30	0.00e+00	1042.00
IUUC-Ptr-091052	Pan troglodytes	71.30	0.00e+00	1040.00
IUUC-Pan-092270	Papio anubis	70.72	0.00e+00	1022.00
IUUC-Psi-093907	Pelodiscus sinensis	71.28	0.00e+00	851.00
IUUC-Pma-094286	Petromyzon marinus	65.04	2.00e-178	619.00
IUUC-Pab-098110	Pongo abelii	71.30	0.00e+00	1040.00
IUUC-Pca-100266	Procavia capensis	60.93	0.00e+00	709.00
IUUC-Pva-102824	Pteropus vampyrus	70.67	0.00e+00	1013.00
IUUC-Pgr-103483	Puccinia graminis	36.99	1.00e-56	215.00
IUUC-Rno-105638	Rattus norvegicus	70.67	0.00e+00	1042.00
IUUC-Sha-107004	Sarcophilus harrisii	69.83	0.00e+00	885.00
IUUC-Ssc-115280	Sus scrofa	71.81	0.00e+00	1046.00
IUUC-Tgu-116759	Taeniopygia guttata	72.59	0.00e+00	932.00
IUUC-Tru-117944	Takifugu rubripes	89.02	0.00e+00	1268.00
IUUC-Tsy-119405	Tarsius syrichta	63.39	0.00e+00	790.00
IUUC-Tni-120571	Tetraodon nigroviridis	87.67	0.00e+00	1276.00
IUUC-Tme-126990	Tuber melanosporum	27.36	9.00e-35	142.00
IUUC-Tbe-127691	Tupaia belangeri	53.70	2.00e-143	503.00
IUUC-Vpa-130294	Vicugna pacos	72.71	0.00e+00	967.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence