iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000000441.1	ENSONIT00000000557.1	ENSONIP00000000558.1
ENSONIG00000000441.1	ENSONIT00000000558.1	ENSONIP00000000559.1
ENSONIG00000000441.1	ENSONIT00000000559.1	ENSONIP00000000560.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	8.50e-06	26.2	15	73
E3 activity/RING/RING	4.40e-07	30.7	16	50

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 7    lCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawce 70
            Cp+  ++++dPvvl +G+++ + ++e+w     + cPv+++ +  +    nl+lr+l ++ + 
   Q: 15   TCPVCCDIFKDPVVLLCGHSFCKYCLEEW----WR-CPVCKEIFPMSRAPRNLALRNLSDNLRR 73
           6****************************....45.*********************9877655 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C++ fkd p+vl CgH f++ Cl+ w          +rCP+C+
   Q: 16   CPVCCDIFKD-PVVLLCGHSFCKYCLEEW----------WRCPVCK 50
           **********.99999*************..........******7 PP

Organism

Oreochromis niloticus

Protein Sequence
(Fasta)

NKMASNVSQS ELDCTCPVCC DIFKDPVVLL CGHSFCKYCL EEWWRCPVCK EIFPMSRAPR 60
NLALRNLSDN LRRERSQAAS ASKELCSLHD EKLRLFCQDD QQLICVVCRD AKQHKNHNCV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACAAAATGG CTTCTAATGT ATCACAGTCT GAACTGGACT GCACCTGCCC TGTTTGTTGT 60
GATATATTTA AGGATCCCGT TGTCTTGCTG TGTGGTCACA GCTTCTGTAA GTATTGTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gmo-039595	Gadus morhua	47.97	3.00e-116	411.00
IUUC-Gac-041913	Gasterosteus aculeatus	58.56	7.00e-152	530.00
IUUC-Mac-064728	Musa acuminata	35.09	2.00e-07	51.60
IUUC-Pfo-097176	Poecilia formosa	56.38	1.00e-147	516.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence